Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 RNU7-79P-201ENST00000516082 62 ntBASIC-1.26□□□□□ -2.61
TRAV4A0A0B4J268 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.26□□□□□ -2.61
TRAV4A0A0B4J268 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.26□□□□□ -2.61
TRAV4A0A0B4J268 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.27□□□□□ -2.61
TRAV4A0A0B4J268 RNU6-1148P-201ENST00000410992 104 ntBASIC-1.27□□□□□ -2.61
TRAV4A0A0B4J268 RPS3AP52-201ENST00000435639 297 ntBASIC-1.27□□□□□ -2.61
TRAV4A0A0B4J268 AL445193.1-201ENST00000441183 141 ntBASIC-1.27□□□□□ -2.61
TRAV4A0A0B4J268 RNU7-169P-201ENST00000459456 61 ntBASIC-1.27□□□□□ -2.61
TRAV4A0A0B4J268 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-1.27□□□□□ -2.61
TRAV4A0A0B4J268 RNU7-110P-201ENST00000516891 62 ntBASIC-1.27□□□□□ -2.61
TRAV4A0A0B4J268 RNU6-264P-201ENST00000517134 104 ntBASIC-1.27□□□□□ -2.61
TRAV4A0A0B4J268 MIR4473-201ENST00000583731 91 ntBASIC-1.27□□□□□ -2.61
TRAV4A0A0B4J268 U6.92-201ENST00000636464 89 ntBASIC-1.27□□□□□ -2.61
TRAV4A0A0B4J268 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.28□□□□□ -2.61
TRAV4A0A0B4J268 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.28□□□□□ -2.61
TRAV4A0A0B4J268 RNU1-141P-201ENST00000364623 158 ntBASIC-1.28□□□□□ -2.61
TRAV4A0A0B4J268 RNU6-449P-201ENST00000383914 107 ntBASIC-1.28□□□□□ -2.61
TRAV4A0A0B4J268 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.28□□□□□ -2.61
TRAV4A0A0B4J268 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.28□□□□□ -2.61
TRAV4A0A0B4J268 AC091932.4-201ENST00000623386 200 ntBASIC-1.28□□□□□ -2.61
TRAV4A0A0B4J268 RNU6-901P-201ENST00000384593 106 ntBASIC-1.29□□□□□ -2.62
TRAV4A0A0B4J268 MIR599-201ENST00000385069 95 ntBASIC-1.29□□□□□ -2.62
TRAV4A0A0B4J268 MIR628-201ENST00000385229 95 ntBASIC-1.29□□□□□ -2.62
TRAV4A0A0B4J268 AL603914.1-201ENST00000401964 204 ntBASIC-1.29□□□□□ -2.62
TRAV4A0A0B4J268 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.29□□□□□ -2.62
TRAV4A0A0B4J268 RPS29P25-201ENST00000481709 171 ntBASIC-1.29□□□□□ -2.62
TRAV4A0A0B4J268 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.29□□□□□ -2.62
TRAV4A0A0B4J268 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.29□□□□□ -2.62
TRAV4A0A0B4J268 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.29□□□□□ -2.62
TRAV4A0A0B4J268 RN7SKP299-201ENST00000606679 301 ntBASIC-1.29□□□□□ -2.62
TRAV4A0A0B4J268 MIR367-201ENST00000362299 68 ntBASIC-1.3□□□□□ -2.62
TRAV4A0A0B4J268 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.3□□□□□ -2.62
TRAV4A0A0B4J268 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.3□□□□□ -2.62
TRAV4A0A0B4J268 MIR9-2-201ENST00000384838 87 ntBASIC-1.3□□□□□ -2.62
TRAV4A0A0B4J268 MIR196A1-201ENST00000388006 70 ntBASIC-1.3□□□□□ -2.62
TRAV4A0A0B4J268 MIR548K-201ENST00000408406 116 ntBASIC-1.3□□□□□ -2.62
TRAV4A0A0B4J268 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.3□□□□□ -2.62
TRAV4A0A0B4J268 SNORA13-201ENST00000458790 133 ntBASIC-1.3□□□□□ -2.62
TRAV4A0A0B4J268 RNU6-893P-201ENST00000458841 100 ntBASIC-1.3□□□□□ -2.62
TRAV4A0A0B4J268 snoU13.11-201ENST00000459219 104 ntBASIC-1.3□□□□□ -2.62
TRAV4A0A0B4J268 RNU6-911P-201ENST00000516523 104 ntBASIC-1.3□□□□□ -2.62
TRAV4A0A0B4J268 SNORA27.4-201ENST00000516650 95 ntBASIC-1.3□□□□□ -2.62
TRAV4A0A0B4J268 RNU6-881P-201ENST00000516813 102 ntBASIC-1.3□□□□□ -2.62
TRAV4A0A0B4J268 MIR3920-201ENST00000581751 86 ntBASIC-1.3□□□□□ -2.62
TRAV4A0A0B4J268 AC090582.1-201ENST00000636321 199 ntBASIC-1.3□□□□□ -2.62
TRAV4A0A0B4J268 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.31□□□□□ -2.62
TRAV4A0A0B4J268 RNU4-80P-201ENST00000363200 141 ntBASIC-1.31□□□□□ -2.62
TRAV4A0A0B4J268 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.31□□□□□ -2.62
TRAV4A0A0B4J268 RNY3P5-201ENST00000384127 102 ntBASIC-1.31□□□□□ -2.62
TRAV4A0A0B4J268 RNU6-397P-201ENST00000516226 104 ntBASIC-1.31□□□□□ -2.62
TRAV4A0A0B4J268 MIR4724-201ENST00000579485 89 ntBASIC-1.31□□□□□ -2.62
TRAV4A0A0B4J268 AC069503.3-201ENST00000618674 145 ntBASIC-1.31□□□□□ -2.62
TRAV4A0A0B4J268 U2.1-201ENST00000618978 145 ntBASIC-1.31□□□□□ -2.62
TRAV4A0A0B4J268 AC021613.1-201ENST00000623880 111 ntBASIC-1.31□□□□□ -2.62
TRAV4A0A0B4J268 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.32□□□□□ -2.62
TRAV4A0A0B4J268 RNU6-900P-201ENST00000384498 102 ntBASIC-1.32□□□□□ -2.62
TRAV4A0A0B4J268 SNORD83B-201ENST00000386745 93 ntBASIC-1.32□□□□□ -2.62
TRAV4A0A0B4J268 MIR548F5-201ENST00000408421 86 ntBASIC-1.32□□□□□ -2.62
TRAV4A0A0B4J268 SPINT5P-201ENST00000448174 155 ntBASIC-1.32□□□□□ -2.62
TRAV4A0A0B4J268 MTCO2P24-201ENST00000515611 426 ntBASIC-1.32□□□□□ -2.62
TRAV4A0A0B4J268 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.32□□□□□ -2.62
TRAV4A0A0B4J268 RNU6-175P-201ENST00000516896 107 ntBASIC-1.32□□□□□ -2.62
TRAV4A0A0B4J268 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.33□□□□□ -2.62
TRAV4A0A0B4J268 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.33□□□□□ -2.62
TRAV4A0A0B4J268 RNU6-30P-201ENST00000384561 107 ntBASIC-1.33□□□□□ -2.62
TRAV4A0A0B4J268 RNU6-429P-201ENST00000384582 108 ntBASIC-1.33□□□□□ -2.62
TRAV4A0A0B4J268 RNU6-21P-201ENST00000384710 107 ntBASIC-1.33□□□□□ -2.62
TRAV4A0A0B4J268 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.33□□□□□ -2.62
TRAV4A0A0B4J268 RNU2-66P-201ENST00000410650 161 ntBASIC-1.33□□□□□ -2.62
TRAV4A0A0B4J268 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-1.33□□□□□ -2.62
TRAV4A0A0B4J268 AC097635.1-201ENST00000450678 155 ntBASIC-1.33□□□□□ -2.62
TRAV4A0A0B4J268 AC107399.1-201ENST00000451226 265 ntBASIC-1.33□□□□□ -2.62
TRAV4A0A0B4J268 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.33□□□□□ -2.62
TRAV4A0A0B4J268 RNU7-13P-201ENST00000516413 62 ntBASIC-1.33□□□□□ -2.62
TRAV4A0A0B4J268 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.33□□□□□ -2.62
TRAV4A0A0B4J268 AC098479.1-201ENST00000609225 154 ntBASIC-1.33□□□□□ -2.62
TRAV4A0A0B4J268 RNY3P11-201ENST00000364153 102 ntBASIC-1.34□□□□□ -2.62
TRAV4A0A0B4J268 RNU4-36P-201ENST00000364294 144 ntBASIC-1.34□□□□□ -2.62
TRAV4A0A0B4J268 RNY1P2-201ENST00000364820 117 ntBASIC-1.34□□□□□ -2.62
TRAV4A0A0B4J268 SCARNA17-201ENST00000516183 144 ntBASIC-1.34□□□□□ -2.62
TRAV4A0A0B4J268 RNU7-35P-201ENST00000517174 62 ntBASIC-1.34□□□□□ -2.62
TRAV4A0A0B4J268 YWHAEP2-201ENST00000580066 112 ntBASIC-1.34□□□□□ -2.62
TRAV4A0A0B4J268 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.34□□□□□ -2.62
TRAV4A0A0B4J268 AC015540.1-201ENST00000615828 501 ntBASIC-1.34□□□□□ -2.62
TRAV4A0A0B4J268 MIR539-201ENST00000365690 78 ntBASIC-1.35□□□□□ -2.63
TRAV4A0A0B4J268 RNU6-763P-201ENST00000390865 106 ntBASIC-1.35□□□□□ -2.63
TRAV4A0A0B4J268 RNA5SP476-201ENST00000516613 103 ntBASIC-1.35□□□□□ -2.63
TRAV4A0A0B4J268 AC109635.3-201ENST00000529536 185 ntBASIC-1.35□□□□□ -2.63
TRAV4A0A0B4J268 MIR4280-201ENST00000582178 76 ntBASIC-1.35□□□□□ -2.63
TRAV4A0A0B4J268 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.36□□□□□ -2.63
TRAV4A0A0B4J268 TRAJ51-201ENST00000504127 63 ntBASIC-1.36□□□□□ -2.63
TRAV4A0A0B4J268 AC013791.1-201ENST00000616619 62 ntBASIC-1.36□□□□□ -2.63
TRAV4A0A0B4J268 RNU6-502P-201ENST00000362419 108 ntBASIC-1.37□□□□□ -2.63
TRAV4A0A0B4J268 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.37□□□□□ -2.63
TRAV4A0A0B4J268 RNY3-201ENST00000365484 102 ntBASIC-1.37□□□□□ -2.63
TRAV4A0A0B4J268 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.37□□□□□ -2.63
TRAV4A0A0B4J268 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.37□□□□□ -2.63
TRAV4A0A0B4J268 MTND1P14-201ENST00000427400 950 ntBASIC-1.37□□□□□ -2.63
TRAV4A0A0B4J268 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.37□□□□□ -2.63
TRAV4A0A0B4J268 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.37□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms