Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.8□□□□□ -1.96
PCDHB11Q9Y5F2 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PCDHB11Q9Y5F2 AL023284.1-201ENST00000403956 276 ntBASIC2.79□□□□□ -1.96
PCDHB11Q9Y5F2 Y_RNA.620-201ENST00000411009 88 ntBASIC2.79□□□□□ -1.96
PCDHB11Q9Y5F2 RNA5SP492-201ENST00000411330 114 ntBASIC2.79□□□□□ -1.96
PCDHB11Q9Y5F2 RNA5SP270-201ENST00000411361 118 ntBASIC2.79□□□□□ -1.96
PCDHB11Q9Y5F2 RPS29P6-201ENST00000438196 145 ntBASIC2.79□□□□□ -1.96
PCDHB11Q9Y5F2 RN7SKP132-201ENST00000516001 208 ntBASIC2.79□□□□□ -1.96
PCDHB11Q9Y5F2 MIR4764-201ENST00000580680 88 ntBASIC2.79□□□□□ -1.96
PCDHB11Q9Y5F2 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.79□□□□□ -1.96
PCDHB11Q9Y5F2 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
PCDHB11Q9Y5F2 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.78□□□□□ -1.96
PCDHB11Q9Y5F2 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PCDHB11Q9Y5F2 RNU6-1163P-201ENST00000364516 107 ntBASIC2.78□□□□□ -1.96
PCDHB11Q9Y5F2 RNU1-138P-201ENST00000384093 164 ntBASIC2.78□□□□□ -1.96
PCDHB11Q9Y5F2 RNU6-602P-201ENST00000411155 105 ntBASIC2.78□□□□□ -1.96
PCDHB11Q9Y5F2 RNU6-917P-201ENST00000516294 104 ntBASIC2.78□□□□□ -1.96
PCDHB11Q9Y5F2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.78□□□□□ -1.96
PCDHB11Q9Y5F2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.78□□□□□ -1.96
PCDHB11Q9Y5F2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
PCDHB11Q9Y5F2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
PCDHB11Q9Y5F2 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.78□□□□□ -1.97
PCDHB11Q9Y5F2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.77□□□□□ -1.97
PCDHB11Q9Y5F2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.77□□□□□ -1.97
PCDHB11Q9Y5F2 AC062016.1-201ENST00000355719 319 ntBASIC2.77□□□□□ -1.97
PCDHB11Q9Y5F2 RNU6-1123P-201ENST00000362347 106 ntBASIC2.77□□□□□ -1.97
PCDHB11Q9Y5F2 U8.9-201ENST00000365667 134 ntBASIC2.77□□□□□ -1.97
PCDHB11Q9Y5F2 MIR34C-201ENST00000384831 77 ntBASIC2.77□□□□□ -1.97
PCDHB11Q9Y5F2 RNA5SP344-201ENST00000411081 104 ntBASIC2.77□□□□□ -1.97
PCDHB11Q9Y5F2 RNU7-171P-201ENST00000459581 62 ntBASIC2.77□□□□□ -1.97
PCDHB11Q9Y5F2 AC234781.5-201ENST00000508429 271 ntBASIC2.77□□□□□ -1.97
PCDHB11Q9Y5F2 AC103810.7-201ENST00000607821 91 ntBASIC2.77□□□□□ -1.97
PCDHB11Q9Y5F2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
PCDHB11Q9Y5F2 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PCDHB11Q9Y5F2 RNU6-787P-201ENST00000384032 107 ntBASIC2.76□□□□□ -1.97
PCDHB11Q9Y5F2 MIR512-1-201ENST00000384913 84 ntBASIC2.76□□□□□ -1.97
PCDHB11Q9Y5F2 RNU6-360P-201ENST00000390944 104 ntBASIC2.76□□□□□ -1.97
PCDHB11Q9Y5F2 RNU6-1086P-201ENST00000410930 100 ntBASIC2.76□□□□□ -1.97
PCDHB11Q9Y5F2 RPS12P2-201ENST00000439728 269 ntBASIC2.76□□□□□ -1.97
PCDHB11Q9Y5F2 RPS29P28-201ENST00000446439 141 ntBASIC2.76□□□□□ -1.97
PCDHB11Q9Y5F2 RNU7-79P-201ENST00000516082 62 ntBASIC2.76□□□□□ -1.97
PCDHB11Q9Y5F2 SNORD67.1-201ENST00000516618 108 ntBASIC2.76□□□□□ -1.97
PCDHB11Q9Y5F2 AC079600.2-201ENST00000550076 130 ntBASIC2.76□□□□□ -1.97
PCDHB11Q9Y5F2 CYP3A52P-201ENST00000563326 91 ntBASIC2.76□□□□□ -1.97
PCDHB11Q9Y5F2 MIR3945-201ENST00000581853 98 ntBASIC2.76□□□□□ -1.97
PCDHB11Q9Y5F2 SNORD14A-201ENST00000606526 91 ntBASIC2.76□□□□□ -1.97
PCDHB11Q9Y5F2 RNU6-86P-201ENST00000606534 107 ntBASIC2.76□□□□□ -1.97
PCDHB11Q9Y5F2 AC005336.3-201ENST00000623833 2679 ntBASIC2.75□□□□□ -1.97
PCDHB11Q9Y5F2 RNU4-82P-201ENST00000362443 140 ntBASIC2.75□□□□□ -1.97
PCDHB11Q9Y5F2 RNU6-865P-201ENST00000364772 107 ntBASIC2.75□□□□□ -1.97
PCDHB11Q9Y5F2 Y_RNA.448-201ENST00000384185 108 ntBASIC2.75□□□□□ -1.97
PCDHB11Q9Y5F2 MIR520C-201ENST00000385005 87 ntBASIC2.75□□□□□ -1.97
PCDHB11Q9Y5F2 SNORD88.1-201ENST00000408684 91 ntBASIC2.75□□□□□ -1.97
PCDHB11Q9Y5F2 RNA5SP450-201ENST00000411206 102 ntBASIC2.75□□□□□ -1.97
PCDHB11Q9Y5F2 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.75□□□□□ -1.97
PCDHB11Q9Y5F2 SNORA31.17-201ENST00000516953 127 ntBASIC2.75□□□□□ -1.97
PCDHB11Q9Y5F2 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.75□□□□□ -1.97
PCDHB11Q9Y5F2 MIR6715A-201ENST00000615929 79 ntBASIC2.75□□□□□ -1.97
PCDHB11Q9Y5F2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PCDHB11Q9Y5F2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
PCDHB11Q9Y5F2 SNORD114-10-201ENST00000363409 72 ntBASIC2.74□□□□□ -1.97
PCDHB11Q9Y5F2 RNY1P4-201ENST00000384595 115 ntBASIC2.74□□□□□ -1.97
PCDHB11Q9Y5F2 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.74□□□□□ -1.97
PCDHB11Q9Y5F2 SNORD109B-201ENST00000458961 67 ntBASIC2.74□□□□□ -1.97
PCDHB11Q9Y5F2 SNORD109A-201ENST00000459128 67 ntBASIC2.74□□□□□ -1.97
PCDHB11Q9Y5F2 MIR4666B-201ENST00000578142 81 ntBASIC2.74□□□□□ -1.97
PCDHB11Q9Y5F2 SEPT14P17-201ENST00000617978 177 ntBASIC2.74□□□□□ -1.97
PCDHB11Q9Y5F2 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.74□□□□□ -1.97
PCDHB11Q9Y5F2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
PCDHB11Q9Y5F2 RNU6-447P-201ENST00000410293 104 ntBASIC2.73□□□□□ -1.97
PCDHB11Q9Y5F2 RNU6-1118P-201ENST00000410382 104 ntBASIC2.73□□□□□ -1.97
PCDHB11Q9Y5F2 RNU6-1076P-201ENST00000410397 104 ntBASIC2.73□□□□□ -1.97
PCDHB11Q9Y5F2 RNU6-355P-201ENST00000410427 104 ntBASIC2.73□□□□□ -1.97
PCDHB11Q9Y5F2 RNU6-791P-201ENST00000410467 104 ntBASIC2.73□□□□□ -1.97
PCDHB11Q9Y5F2 RNU6-705P-201ENST00000410601 104 ntBASIC2.73□□□□□ -1.97
PCDHB11Q9Y5F2 RNU6-1100P-201ENST00000410691 104 ntBASIC2.73□□□□□ -1.97
PCDHB11Q9Y5F2 RNU6-860P-201ENST00000410860 104 ntBASIC2.73□□□□□ -1.97
PCDHB11Q9Y5F2 RNU6-1217P-201ENST00000411276 104 ntBASIC2.73□□□□□ -1.97
PCDHB11Q9Y5F2 RNU6-785P-201ENST00000411324 104 ntBASIC2.73□□□□□ -1.97
PCDHB11Q9Y5F2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.73□□□□□ -1.97
PCDHB11Q9Y5F2 RNU7-137P-201ENST00000516788 62 ntBASIC2.73□□□□□ -1.97
PCDHB11Q9Y5F2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.73□□□□□ -1.97
PCDHB11Q9Y5F2 U6.90-201ENST00000614007 104 ntBASIC2.73□□□□□ -1.97
PCDHB11Q9Y5F2 U6.70-201ENST00000620287 104 ntBASIC2.73□□□□□ -1.97
PCDHB11Q9Y5F2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
PCDHB11Q9Y5F2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHB11Q9Y5F2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHB11Q9Y5F2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHB11Q9Y5F2 RNU6-1244P-201ENST00000363614 108 ntBASIC2.72□□□□□ -1.97
PCDHB11Q9Y5F2 RNU6-203P-201ENST00000384038 104 ntBASIC2.72□□□□□ -1.97
PCDHB11Q9Y5F2 Y_RNA.426-201ENST00000384068 113 ntBASIC2.72□□□□□ -1.97
PCDHB11Q9Y5F2 RNU6-1321P-201ENST00000390905 107 ntBASIC2.72□□□□□ -1.97
PCDHB11Q9Y5F2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.72□□□□□ -1.97
PCDHB11Q9Y5F2 SNORA31.25-201ENST00000517242 134 ntBASIC2.72□□□□□ -1.97
PCDHB11Q9Y5F2 MIR548AO-201ENST00000579992 96 ntBASIC2.72□□□□□ -1.97
PCDHB11Q9Y5F2 AL161431.1-201ENST00000618966 4205 ntBASIC2.72□□□□□ -1.97
PCDHB11Q9Y5F2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PCDHB11Q9Y5F2 MIR548G-201ENST00000408442 89 ntBASIC2.71□□□□□ -1.98
PCDHB11Q9Y5F2 MIR4251-201ENST00000635819 61 ntBASIC2.71□□□□□ -1.98
PCDHB11Q9Y5F2 MIR26A1-201ENST00000362205 77 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 199.9 ms