Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
MRPS28Q9Y2Q9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
MRPS28Q9Y2Q9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
MRPS28Q9Y2Q9 SNORA20-201ENST00000384662 132 ntBASIC1.12□□□□□ -2.23
MRPS28Q9Y2Q9 SNORD37.2-201ENST00000391075 66 ntBASIC1.12□□□□□ -2.23
MRPS28Q9Y2Q9 Y_RNA.584-201ENST00000391090 114 ntBASIC1.12□□□□□ -2.23
MRPS28Q9Y2Q9 SNORA26.6-201ENST00000391256 115 ntBASIC1.12□□□□□ -2.23
MRPS28Q9Y2Q9 MIR548M-201ENST00000408260 86 ntBASIC1.12□□□□□ -2.23
MRPS28Q9Y2Q9 RNU6-1054P-201ENST00000411293 104 ntBASIC1.12□□□□□ -2.23
MRPS28Q9Y2Q9 MTND4LP9-201ENST00000427694 174 ntBASIC1.12□□□□□ -2.23
MRPS28Q9Y2Q9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.12□□□□□ -2.23
MRPS28Q9Y2Q9 AL392103.1-201ENST00000447000 198 ntBASIC1.12□□□□□ -2.23
MRPS28Q9Y2Q9 RPS29P29-201ENST00000456396 171 ntBASIC1.12□□□□□ -2.23
MRPS28Q9Y2Q9 RNU7-96P-201ENST00000459535 64 ntBASIC1.12□□□□□ -2.23
MRPS28Q9Y2Q9 RPL30P7-201ENST00000479312 323 ntBASIC1.12□□□□□ -2.23
MRPS28Q9Y2Q9 MIR4303-201ENST00000581299 66 ntBASIC1.12□□□□□ -2.23
MRPS28Q9Y2Q9 AL357312.1-201ENST00000603879 298 ntBASIC1.12□□□□□ -2.23
MRPS28Q9Y2Q9 MIR8055-201ENST00000610739 97 ntBASIC1.12□□□□□ -2.23
MRPS28Q9Y2Q9 AC243994.1-201ENST00000618627 109 ntBASIC1.12□□□□□ -2.23
MRPS28Q9Y2Q9 AC091932.4-201ENST00000623386 200 ntBASIC1.12□□□□□ -2.23
MRPS28Q9Y2Q9 RNU6-349P-201ENST00000362402 107 ntBASIC1.11□□□□□ -2.23
MRPS28Q9Y2Q9 RNU6-704P-201ENST00000364162 103 ntBASIC1.11□□□□□ -2.23
MRPS28Q9Y2Q9 RNU6-309P-201ENST00000364573 106 ntBASIC1.11□□□□□ -2.23
MRPS28Q9Y2Q9 RNU6-939P-201ENST00000384634 107 ntBASIC1.11□□□□□ -2.23
MRPS28Q9Y2Q9 Y_RNA.586-201ENST00000391146 98 ntBASIC1.11□□□□□ -2.23
MRPS28Q9Y2Q9 SNORA17.3-201ENST00000391159 129 ntBASIC1.11□□□□□ -2.23
MRPS28Q9Y2Q9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.11□□□□□ -2.23
MRPS28Q9Y2Q9 MIR513C-201ENST00000401352 84 ntBASIC1.11□□□□□ -2.23
MRPS28Q9Y2Q9 AL603914.1-201ENST00000401964 204 ntBASIC1.11□□□□□ -2.23
MRPS28Q9Y2Q9 RNU4-62P-201ENST00000410125 130 ntBASIC1.11□□□□□ -2.23
MRPS28Q9Y2Q9 RNU7-73P-201ENST00000458743 63 ntBASIC1.11□□□□□ -2.23
MRPS28Q9Y2Q9 RNU1-123P-201ENST00000458950 160 ntBASIC1.11□□□□□ -2.23
MRPS28Q9Y2Q9 AC019288.1-201ENST00000557918 224 ntBASIC1.11□□□□□ -2.23
MRPS28Q9Y2Q9 CYP3A52P-201ENST00000563326 91 ntBASIC1.11□□□□□ -2.23
MRPS28Q9Y2Q9 MIR3121-201ENST00000579680 77 ntBASIC1.11□□□□□ -2.23
MRPS28Q9Y2Q9 MIR548AO-201ENST00000579992 96 ntBASIC1.11□□□□□ -2.23
MRPS28Q9Y2Q9 PRELID3BP2-201ENST00000605362 201 ntBASIC1.11□□□□□ -2.23
MRPS28Q9Y2Q9 AC010332.2-201ENST00000613083 1904 ntBASIC1.11□□□□□ -2.23
MRPS28Q9Y2Q9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.1□□□□□ -2.23
MRPS28Q9Y2Q9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
MRPS28Q9Y2Q9 SNORA25.8-201ENST00000364831 128 ntBASIC1.1□□□□□ -2.23
MRPS28Q9Y2Q9 Y_RNA.351-201ENST00000365436 96 ntBASIC1.1□□□□□ -2.23
MRPS28Q9Y2Q9 Y_RNA.363-201ENST00000365529 113 ntBASIC1.1□□□□□ -2.23
MRPS28Q9Y2Q9 MIR613-201ENST00000385248 95 ntBASIC1.1□□□□□ -2.23
MRPS28Q9Y2Q9 MIR1185-1-201ENST00000408598 86 ntBASIC1.1□□□□□ -2.23
MRPS28Q9Y2Q9 RNU6-1190P-201ENST00000410811 104 ntBASIC1.1□□□□□ -2.23
MRPS28Q9Y2Q9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.1□□□□□ -2.23
MRPS28Q9Y2Q9 AC108729.3-201ENST00000513484 108 ntBASIC1.1□□□□□ -2.23
MRPS28Q9Y2Q9 AL020996.3-201ENST00000606617 222 ntBASIC1.1□□□□□ -2.23
MRPS28Q9Y2Q9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
MRPS28Q9Y2Q9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.09□□□□□ -2.23
MRPS28Q9Y2Q9 RNU6-915P-201ENST00000364943 103 ntBASIC1.09□□□□□ -2.23
MRPS28Q9Y2Q9 SNORA51.10-201ENST00000384418 136 ntBASIC1.09□□□□□ -2.23
MRPS28Q9Y2Q9 RNU6-1065P-201ENST00000384513 106 ntBASIC1.09□□□□□ -2.23
MRPS28Q9Y2Q9 MIR618-201ENST00000385287 98 ntBASIC1.09□□□□□ -2.23
MRPS28Q9Y2Q9 AC090844.1-201ENST00000422019 156 ntBASIC1.09□□□□□ -2.23
MRPS28Q9Y2Q9 AL035398.1-201ENST00000430869 322 ntBASIC1.09□□□□□ -2.23
MRPS28Q9Y2Q9 AL133373.1-201ENST00000497098 94 ntBASIC1.09□□□□□ -2.23
MRPS28Q9Y2Q9 RN7SKP179-201ENST00000516126 217 ntBASIC1.09□□□□□ -2.23
MRPS28Q9Y2Q9 MIR4421-201ENST00000578133 69 ntBASIC1.09□□□□□ -2.23
MRPS28Q9Y2Q9 HSPE1P19-201ENST00000603327 295 ntBASIC1.09□□□□□ -2.23
MRPS28Q9Y2Q9 snoU13.31-201ENST00000607291 104 ntBASIC1.09□□□□□ -2.23
MRPS28Q9Y2Q9 MIR4251-201ENST00000635819 61 ntBASIC1.09□□□□□ -2.23
MRPS28Q9Y2Q9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.08□□□□□ -2.24
MRPS28Q9Y2Q9 BTF3P4-201ENST00000418852 495 ntBASIC1.08□□□□□ -2.24
MRPS28Q9Y2Q9 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.08□□□□□ -2.24
MRPS28Q9Y2Q9 RNU2-11P-201ENST00000459191 187 ntBASIC1.08□□□□□ -2.24
MRPS28Q9Y2Q9 RNU7-95P-201ENST00000459222 64 ntBASIC1.08□□□□□ -2.24
MRPS28Q9Y2Q9 snoU13.16-201ENST00000459350 104 ntBASIC1.08□□□□□ -2.24
MRPS28Q9Y2Q9 RNU7-45P-201ENST00000459460 63 ntBASIC1.08□□□□□ -2.24
MRPS28Q9Y2Q9 AC048334.1-201ENST00000477975 159 ntBASIC1.08□□□□□ -2.24
MRPS28Q9Y2Q9 RNU6-958P-201ENST00000516995 106 ntBASIC1.08□□□□□ -2.24
MRPS28Q9Y2Q9 AC108081.1-201ENST00000604358 221 ntBASIC1.08□□□□□ -2.24
MRPS28Q9Y2Q9 AL022345.2-201ENST00000606307 135 ntBASIC1.08□□□□□ -2.24
MRPS28Q9Y2Q9 MIR6841-201ENST00000637129 72 ntBASIC1.08□□□□□ -2.24
MRPS28Q9Y2Q9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
MRPS28Q9Y2Q9 SNORA7.1-201ENST00000363750 139 ntBASIC1.07□□□□□ -2.24
MRPS28Q9Y2Q9 RNA5SP48-201ENST00000363969 126 ntBASIC1.07□□□□□ -2.24
MRPS28Q9Y2Q9 Y_RNA.294-201ENST00000364916 102 ntBASIC1.07□□□□□ -2.24
MRPS28Q9Y2Q9 Y_RNA.343-201ENST00000365354 112 ntBASIC1.07□□□□□ -2.24
MRPS28Q9Y2Q9 AP1B1P2-201ENST00000416196 106 ntBASIC1.07□□□□□ -2.24
MRPS28Q9Y2Q9 HMGN1P33-201ENST00000432945 451 ntBASIC1.07□□□□□ -2.24
MRPS28Q9Y2Q9 AL603825.1-201ENST00000438481 80 ntBASIC1.07□□□□□ -2.24
MRPS28Q9Y2Q9 AC245047.7-201ENST00000440265 293 ntBASIC1.07□□□□□ -2.24
MRPS28Q9Y2Q9 RNU7-80P-201ENST00000459562 61 ntBASIC1.07□□□□□ -2.24
MRPS28Q9Y2Q9 AC107297.1-201ENST00000459991 176 ntBASIC1.07□□□□□ -2.24
MRPS28Q9Y2Q9 AC004223.1-201ENST00000479840 271 ntBASIC1.07□□□□□ -2.24
MRPS28Q9Y2Q9 Y_RNA.690-201ENST00000516603 95 ntBASIC1.07□□□□□ -2.24
MRPS28Q9Y2Q9 IGKV1-22-201ENST00000524313 326 ntBASIC1.07□□□□□ -2.24
MRPS28Q9Y2Q9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.07□□□□□ -2.24
MRPS28Q9Y2Q9 Z97988.1-201ENST00000637697 135 ntBASIC1.07□□□□□ -2.24
MRPS28Q9Y2Q9 RNA5SP264-201ENST00000363115 107 ntBASIC1.06□□□□□ -2.24
MRPS28Q9Y2Q9 SNORA25.3-201ENST00000363205 127 ntBASIC1.06□□□□□ -2.24
MRPS28Q9Y2Q9 Y_RNA.338-201ENST00000365320 114 ntBASIC1.06□□□□□ -2.24
MRPS28Q9Y2Q9 RNU6-81P-201ENST00000365608 104 ntBASIC1.06□□□□□ -2.24
MRPS28Q9Y2Q9 SNORA70.7-201ENST00000384159 133 ntBASIC1.06□□□□□ -2.24
MRPS28Q9Y2Q9 RNU6-1319P-201ENST00000390855 104 ntBASIC1.06□□□□□ -2.24
MRPS28Q9Y2Q9 RNU6-747P-201ENST00000390928 104 ntBASIC1.06□□□□□ -2.24
MRPS28Q9Y2Q9 RNU6-241P-201ENST00000391148 104 ntBASIC1.06□□□□□ -2.24
MRPS28Q9Y2Q9 RNU6-177P-201ENST00000411257 104 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 239.1 ms