Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 SNORA1.1-201ENST00000364671 133 ntBASIC0.46□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-211P-201ENST00000384047 107 ntBASIC0.46□□□□□ -2.34
NPC1L1Q9UHC9 MIR626-201ENST00000385032 94 ntBASIC0.46□□□□□ -2.34
NPC1L1Q9UHC9 MIR140-201ENST00000385282 100 ntBASIC0.46□□□□□ -2.34
NPC1L1Q9UHC9 MIR8055-201ENST00000610739 97 ntBASIC0.46□□□□□ -2.34
NPC1L1Q9UHC9 Y_RNA.24-201ENST00000362508 103 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-369P-201ENST00000362515 102 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 Y_RNA.64-201ENST00000362845 102 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 Y_RNA.229-201ENST00000364347 113 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 Y_RNA.275-201ENST00000364726 110 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 Y_RNA.280-201ENST00000364765 112 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 SNORD61-201ENST00000384252 73 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 Y_RNA.494-201ENST00000384432 111 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 AC244023.1-201ENST00000426884 112 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 RNA5SP153-201ENST00000516498 76 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 MIR4804-201ENST00000581683 73 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 MIR4676-201ENST00000583078 72 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 AC242498.1-201ENST00000604134 111 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 Y_RNA.138-201ENST00000363462 102 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-806P-201ENST00000365147 105 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 Y_RNA.412-201ENST00000384001 104 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-1289P-201ENST00000384431 106 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 SNORD77.3-201ENST00000391113 65 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 MIR938-201ENST00000401216 83 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 RNA5SP261-201ENST00000410536 106 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-938P-201ENST00000411285 103 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 AC090844.1-201ENST00000422019 156 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 snoU13.21-201ENST00000459368 105 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-1270P-201ENST00000517128 108 ntBASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.45□□□□□ -2.34
NPC1L1Q9UHC9 Y_RNA.16-201ENST00000362421 102 ntBASIC0.44□□□□□ -2.34
NPC1L1Q9UHC9 Y_RNA.44-201ENST00000362676 108 ntBASIC0.44□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-639P-201ENST00000384074 107 ntBASIC0.44□□□□□ -2.34
NPC1L1Q9UHC9 Y_RNA.432-201ENST00000384087 111 ntBASIC0.44□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-1203P-201ENST00000410703 110 ntBASIC0.44□□□□□ -2.34
NPC1L1Q9UHC9 SCARNA24.2-201ENST00000516968 130 ntBASIC0.44□□□□□ -2.34
NPC1L1Q9UHC9 AC020661.2-201ENST00000560114 134 ntBASIC0.44□□□□□ -2.34
NPC1L1Q9UHC9 U6.104-201ENST00000637979 90 ntBASIC0.44□□□□□ -2.34
NPC1L1Q9UHC9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-797P-201ENST00000363101 109 ntBASIC0.43□□□□□ -2.34
NPC1L1Q9UHC9 RNU4-67P-201ENST00000364569 141 ntBASIC0.43□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-1189P-201ENST00000383958 107 ntBASIC0.43□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-713P-201ENST00000384761 107 ntBASIC0.43□□□□□ -2.34
NPC1L1Q9UHC9 MIR548A2-201ENST00000384956 97 ntBASIC0.43□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-913P-201ENST00000390913 95 ntBASIC0.43□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-985P-201ENST00000410182 104 ntBASIC0.43□□□□□ -2.34
NPC1L1Q9UHC9 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.43□□□□□ -2.34
NPC1L1Q9UHC9 AC067863.3-201ENST00000624172 122 ntBASIC0.43□□□□□ -2.34
NPC1L1Q9UHC9 MIR302B-201ENST00000362188 73 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 Y_RNA.153-201ENST00000363615 91 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 RNU4-10P-201ENST00000364383 140 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 RNY1P8-201ENST00000383970 114 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-364P-201ENST00000384387 107 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 MIR588-201ENST00000384900 83 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-1319P-201ENST00000390855 104 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-747P-201ENST00000390928 104 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-241P-201ENST00000391148 104 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 MIR548I3-201ENST00000408378 149 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-1165P-201ENST00000410119 107 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-447P-201ENST00000410293 104 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-1118P-201ENST00000410382 104 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-1076P-201ENST00000410397 104 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-355P-201ENST00000410427 104 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-791P-201ENST00000410467 104 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-705P-201ENST00000410601 104 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-1100P-201ENST00000410691 104 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-860P-201ENST00000410860 104 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-1217P-201ENST00000411276 104 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-785P-201ENST00000411324 104 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 RNU7-56P-201ENST00000458744 62 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 RNU6-998P-201ENST00000515894 101 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 SNORD36C-201ENST00000516733 66 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 MIR3612-201ENST00000579753 87 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 AL356055.1-201ENST00000602528 446 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 U6.90-201ENST00000614007 104 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 U6.70-201ENST00000620287 104 ntBASIC0.42□□□□□ -2.34
NPC1L1Q9UHC9 MIR18A-201ENST00000362310 71 ntBASIC0.41□□□□□ -2.34
NPC1L1Q9UHC9 Y_RNA.634-201ENST00000364811 113 ntBASIC0.41□□□□□ -2.34
NPC1L1Q9UHC9 MT-TF-201ENST00000387314 71 ntBASIC0.41□□□□□ -2.34
NPC1L1Q9UHC9 MIR1257-201ENST00000408490 117 ntBASIC0.41□□□□□ -2.34
NPC1L1Q9UHC9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.41□□□□□ -2.34
NPC1L1Q9UHC9 RNU2-11P-201ENST00000459191 187 ntBASIC0.41□□□□□ -2.34
NPC1L1Q9UHC9 snoU13.2-201ENST00000459201 104 ntBASIC0.41□□□□□ -2.34
NPC1L1Q9UHC9 TRBVB-201ENST00000477100 408 ntBASIC0.41□□□□□ -2.34
NPC1L1Q9UHC9 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.41□□□□□ -2.34
NPC1L1Q9UHC9 AC044792.1-201ENST00000593294 196 ntBASIC0.41□□□□□ -2.34
NPC1L1Q9UHC9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.41□□□□□ -2.34
NPC1L1Q9UHC9 AC010332.2-201ENST00000613083 1904 ntBASIC0.4□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.26-201ENST00000362539 101 ntBASIC0.4□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.66-201ENST00000362862 102 ntBASIC0.4□□□□□ -2.35
NPC1L1Q9UHC9 SNORA33.2-201ENST00000365413 134 ntBASIC0.4□□□□□ -2.35
NPC1L1Q9UHC9 RNU6-1228P-201ENST00000391014 107 ntBASIC0.4□□□□□ -2.35
NPC1L1Q9UHC9 SNORA79-201ENST00000408376 140 ntBASIC0.4□□□□□ -2.35
NPC1L1Q9UHC9 RNU6-602P-201ENST00000411155 105 ntBASIC0.4□□□□□ -2.35
NPC1L1Q9UHC9 AC097639.2-201ENST00000603159 172 ntBASIC0.4□□□□□ -2.35
NPC1L1Q9UHC9 AL162730.1-201ENST00000605734 292 ntBASIC0.4□□□□□ -2.35
NPC1L1Q9UHC9 AC020891.4-201ENST00000605745 93 ntBASIC0.4□□□□□ -2.35
NPC1L1Q9UHC9 MIR6718-201ENST00000616153 80 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms