Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RN7SL20P-201ENST00000488827 297 ntBASIC2.95□□□□□ -1.94
CUEDC1Q9NWM3 RNA5SP356-201ENST00000515972 94 ntBASIC2.95□□□□□ -1.94
CUEDC1Q9NWM3 AC005786.1-201ENST00000588553 154 ntBASIC2.95□□□□□ -1.94
CUEDC1Q9NWM3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CUEDC1Q9NWM3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
CUEDC1Q9NWM3 RNU6-1094P-201ENST00000362416 104 ntBASIC2.94□□□□□ -1.94
CUEDC1Q9NWM3 RNU6-913P-201ENST00000390913 95 ntBASIC2.94□□□□□ -1.94
CUEDC1Q9NWM3 RNU6-1307P-201ENST00000391012 103 ntBASIC2.94□□□□□ -1.94
CUEDC1Q9NWM3 U8.16-201ENST00000391279 133 ntBASIC2.94□□□□□ -1.94
CUEDC1Q9NWM3 HMGN2P3-201ENST00000433603 273 ntBASIC2.94□□□□□ -1.94
CUEDC1Q9NWM3 HMGN2P5-201ENST00000436882 273 ntBASIC2.94□□□□□ -1.94
CUEDC1Q9NWM3 RN7SL75P-201ENST00000461926 281 ntBASIC2.94□□□□□ -1.94
CUEDC1Q9NWM3 AC090255.1-201ENST00000495779 349 ntBASIC2.94□□□□□ -1.94
CUEDC1Q9NWM3 RNU6-237P-201ENST00000515985 71 ntBASIC2.94□□□□□ -1.94
CUEDC1Q9NWM3 SNORA31.10-201ENST00000516482 106 ntBASIC2.94□□□□□ -1.94
CUEDC1Q9NWM3 AL513043.2-201ENST00000573941 143 ntBASIC2.94□□□□□ -1.94
CUEDC1Q9NWM3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.94□□□□□ -1.94
CUEDC1Q9NWM3 AC243994.1-201ENST00000618627 109 ntBASIC2.94□□□□□ -1.94
CUEDC1Q9NWM3 MIR622-201ENST00000638396 96 ntBASIC2.94□□□□□ -1.94
CUEDC1Q9NWM3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.94□□□□□ -1.94
CUEDC1Q9NWM3 AC005336.3-201ENST00000623833 2679 ntBASIC2.93□□□□□ -1.94
CUEDC1Q9NWM3 MIR22-201ENST00000362190 85 ntBASIC2.93□□□□□ -1.94
CUEDC1Q9NWM3 Y_RNA.354-201ENST00000365448 111 ntBASIC2.93□□□□□ -1.94
CUEDC1Q9NWM3 SPINT5P-201ENST00000448174 155 ntBASIC2.93□□□□□ -1.94
CUEDC1Q9NWM3 SNORA31.25-201ENST00000517242 134 ntBASIC2.93□□□□□ -1.94
CUEDC1Q9NWM3 AC069114.2-201ENST00000604699 304 ntBASIC2.93□□□□□ -1.94
CUEDC1Q9NWM3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.93□□□□□ -1.94
CUEDC1Q9NWM3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.93□□□□□ -1.94
CUEDC1Q9NWM3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CUEDC1Q9NWM3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CUEDC1Q9NWM3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CUEDC1Q9NWM3 SNORD114-10-201ENST00000363409 72 ntBASIC2.92□□□□□ -1.94
CUEDC1Q9NWM3 Y_RNA.537-201ENST00000384626 109 ntBASIC2.92□□□□□ -1.94
CUEDC1Q9NWM3 SNORD23.1-201ENST00000408212 104 ntBASIC2.92□□□□□ -1.94
CUEDC1Q9NWM3 MIR1236-201ENST00000408340 102 ntBASIC2.92□□□□□ -1.94
CUEDC1Q9NWM3 RNU7-12P-201ENST00000516030 62 ntBASIC2.92□□□□□ -1.94
CUEDC1Q9NWM3 RNA5SP168-201ENST00000516642 112 ntBASIC2.92□□□□□ -1.94
CUEDC1Q9NWM3 AC007318.2-201ENST00000620999 243 ntBASIC2.92□□□□□ -1.94
CUEDC1Q9NWM3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CUEDC1Q9NWM3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
CUEDC1Q9NWM3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CUEDC1Q9NWM3 Y_RNA.448-201ENST00000384185 108 ntBASIC2.91□□□□□ -1.94
CUEDC1Q9NWM3 RNU6-1067P-201ENST00000384752 107 ntBASIC2.91□□□□□ -1.94
CUEDC1Q9NWM3 SNORA46-201ENST00000384762 135 ntBASIC2.91□□□□□ -1.94
CUEDC1Q9NWM3 MIR516B2-201ENST00000385190 85 ntBASIC2.91□□□□□ -1.94
CUEDC1Q9NWM3 AC245047.7-201ENST00000440265 293 ntBASIC2.91□□□□□ -1.94
CUEDC1Q9NWM3 snoU13.16-201ENST00000459350 104 ntBASIC2.91□□□□□ -1.94
CUEDC1Q9NWM3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.91□□□□□ -1.94
CUEDC1Q9NWM3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CUEDC1Q9NWM3 Y_RNA.98-201ENST00000363109 102 ntBASIC2.9□□□□□ -1.95
CUEDC1Q9NWM3 Y_RNA.168-201ENST00000363740 102 ntBASIC2.9□□□□□ -1.95
CUEDC1Q9NWM3 RNU6-342P-201ENST00000384521 104 ntBASIC2.9□□□□□ -1.95
CUEDC1Q9NWM3 RNU6-519P-201ENST00000410590 108 ntBASIC2.9□□□□□ -1.95
CUEDC1Q9NWM3 AC234781.5-201ENST00000508429 271 ntBASIC2.9□□□□□ -1.95
CUEDC1Q9NWM3 AC022513.1-201ENST00000624512 117 ntBASIC2.9□□□□□ -1.95
CUEDC1Q9NWM3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
CUEDC1Q9NWM3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.9□□□□□ -1.95
CUEDC1Q9NWM3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.89□□□□□ -1.95
CUEDC1Q9NWM3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CUEDC1Q9NWM3 SNORA71.1-201ENST00000364523 117 ntBASIC2.89□□□□□ -1.95
CUEDC1Q9NWM3 RNU1-51P-201ENST00000365345 176 ntBASIC2.89□□□□□ -1.95
CUEDC1Q9NWM3 MIR181B2-201ENST00000385004 89 ntBASIC2.89□□□□□ -1.95
CUEDC1Q9NWM3 MIR1283-2-201ENST00000408621 87 ntBASIC2.89□□□□□ -1.95
CUEDC1Q9NWM3 MIR1261-201ENST00000408659 82 ntBASIC2.89□□□□□ -1.95
CUEDC1Q9NWM3 RNU6-1086P-201ENST00000410930 100 ntBASIC2.89□□□□□ -1.95
CUEDC1Q9NWM3 RNU6-602P-201ENST00000411155 105 ntBASIC2.89□□□□□ -1.95
CUEDC1Q9NWM3 AC011753.1-201ENST00000451001 220 ntBASIC2.89□□□□□ -1.95
CUEDC1Q9NWM3 AC004223.1-201ENST00000479840 271 ntBASIC2.89□□□□□ -1.95
CUEDC1Q9NWM3 SNORA25.13-201ENST00000516395 103 ntBASIC2.89□□□□□ -1.95
CUEDC1Q9NWM3 RNU6-539P-201ENST00000516665 103 ntBASIC2.89□□□□□ -1.95
CUEDC1Q9NWM3 GTF3AP2-201ENST00000557014 266 ntBASIC2.89□□□□□ -1.95
CUEDC1Q9NWM3 FAM106DP-201ENST00000586416 501 ntBASIC2.89□□□□□ -1.95
CUEDC1Q9NWM3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.89□□□□□ -1.95
CUEDC1Q9NWM3 AC012676.2-201ENST00000619258 186 ntBASIC2.89□□□□□ -1.95
CUEDC1Q9NWM3 U1.36-201ENST00000620684 176 ntBASIC2.89□□□□□ -1.95
CUEDC1Q9NWM3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CUEDC1Q9NWM3 RNU6-624P-201ENST00000363411 107 ntBASIC2.88□□□□□ -1.95
CUEDC1Q9NWM3 SNORA40.18-201ENST00000391200 128 ntBASIC2.88□□□□□ -1.95
CUEDC1Q9NWM3 HSPE1P9-201ENST00000440046 311 ntBASIC2.88□□□□□ -1.95
CUEDC1Q9NWM3 UQCRHP3-201ENST00000451503 251 ntBASIC2.88□□□□□ -1.95
CUEDC1Q9NWM3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.88□□□□□ -1.95
CUEDC1Q9NWM3 RNU6-523P-201ENST00000516304 54 ntBASIC2.88□□□□□ -1.95
CUEDC1Q9NWM3 SNORD67.1-201ENST00000516618 108 ntBASIC2.88□□□□□ -1.95
CUEDC1Q9NWM3 MIR548AR-201ENST00000582191 57 ntBASIC2.88□□□□□ -1.95
CUEDC1Q9NWM3 MIR8055-201ENST00000610739 97 ntBASIC2.88□□□□□ -1.95
CUEDC1Q9NWM3 AC009487.2-201ENST00000420969 6821 ntBASIC2.88□□□□□ -1.95
CUEDC1Q9NWM3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CUEDC1Q9NWM3 RNA5SP138-201ENST00000365098 114 ntBASIC2.87□□□□□ -1.95
CUEDC1Q9NWM3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CUEDC1Q9NWM3 RNU6-1321P-201ENST00000390905 107 ntBASIC2.87□□□□□ -1.95
CUEDC1Q9NWM3 RNU6-380P-201ENST00000410207 107 ntBASIC2.87□□□□□ -1.95
CUEDC1Q9NWM3 RNA5SP274-201ENST00000410484 108 ntBASIC2.87□□□□□ -1.95
CUEDC1Q9NWM3 RNA5SP184-201ENST00000411071 108 ntBASIC2.87□□□□□ -1.95
CUEDC1Q9NWM3 Z98742.3-201ENST00000418637 326 ntBASIC2.87□□□□□ -1.95
CUEDC1Q9NWM3 RNU7-48P-201ENST00000458875 63 ntBASIC2.87□□□□□ -1.95
CUEDC1Q9NWM3 SNORD123-201ENST00000459473 70 ntBASIC2.87□□□□□ -1.95
CUEDC1Q9NWM3 RNU7-79P-201ENST00000516082 62 ntBASIC2.87□□□□□ -1.95
CUEDC1Q9NWM3 RNU6-557P-201ENST00000516842 110 ntBASIC2.87□□□□□ -1.95
CUEDC1Q9NWM3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.87□□□□□ -1.95
CUEDC1Q9NWM3 MTND5P40-201ENST00000559945 246 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 189.4 ms