Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.56□□□□□ -2
RC3H2Q9HBD1 RNU6-1313P-201ENST00000362622 102 ntBASIC2.56□□□□□ -2
RC3H2Q9HBD1 RNA5SP493-201ENST00000364115 91 ntBASIC2.56□□□□□ -2
RC3H2Q9HBD1 SNORA67.1-201ENST00000364749 141 ntBASIC2.56□□□□□ -2
RC3H2Q9HBD1 Y_RNA.426-201ENST00000384068 113 ntBASIC2.56□□□□□ -2
RC3H2Q9HBD1 RNY1P4-201ENST00000384595 115 ntBASIC2.56□□□□□ -2
RC3H2Q9HBD1 MIR29C-201ENST00000385231 88 ntBASIC2.56□□□□□ -2
RC3H2Q9HBD1 RNA5SP109-201ENST00000391010 116 ntBASIC2.56□□□□□ -2
RC3H2Q9HBD1 AL591806.2-201ENST00000433122 173 ntBASIC2.56□□□□□ -2
RC3H2Q9HBD1 RNU7-28P-201ENST00000516759 62 ntBASIC2.56□□□□□ -2
RC3H2Q9HBD1 RNU7-181P-201ENST00000517234 74 ntBASIC2.56□□□□□ -2
RC3H2Q9HBD1 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.56□□□□□ -2
RC3H2Q9HBD1 AC015712.3-201ENST00000559380 164 ntBASIC2.56□□□□□ -2
RC3H2Q9HBD1 MIR6841-201ENST00000637129 72 ntBASIC2.56□□□□□ -2
RC3H2Q9HBD1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
RC3H2Q9HBD1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RC3H2Q9HBD1 Y_RNA.4-201ENST00000362333 112 ntBASIC2.55□□□□□ -2
RC3H2Q9HBD1 U8.15-201ENST00000390947 134 ntBASIC2.55□□□□□ -2
RC3H2Q9HBD1 AC139453.2-201ENST00000487255 133 ntBASIC2.55□□□□□ -2
RC3H2Q9HBD1 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.55□□□□□ -2
RC3H2Q9HBD1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.55□□□□□ -2
RC3H2Q9HBD1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.55□□□□□ -2
RC3H2Q9HBD1 AC022202.1-201ENST00000613515 211 ntBASIC2.55□□□□□ -2
RC3H2Q9HBD1 AC131280.1-202ENST00000624067 4211 ntBASIC2.55□□□□□ -2
RC3H2Q9HBD1 AC022513.1-201ENST00000624512 117 ntBASIC2.55□□□□□ -2
RC3H2Q9HBD1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.54□□□□□ -2
RC3H2Q9HBD1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.54□□□□□ -2
RC3H2Q9HBD1 SNORD116-10-201ENST00000363791 102 ntBASIC2.54□□□□□ -2
RC3H2Q9HBD1 Y_RNA.191-201ENST00000363972 113 ntBASIC2.54□□□□□ -2
RC3H2Q9HBD1 SNORD58A-201ENST00000383875 65 ntBASIC2.54□□□□□ -2
RC3H2Q9HBD1 RNU6-1319P-201ENST00000390855 104 ntBASIC2.54□□□□□ -2
RC3H2Q9HBD1 RNU6-747P-201ENST00000390928 104 ntBASIC2.54□□□□□ -2
RC3H2Q9HBD1 RNU6-241P-201ENST00000391148 104 ntBASIC2.54□□□□□ -2
RC3H2Q9HBD1 RNU6-177P-201ENST00000411257 104 ntBASIC2.54□□□□□ -2
RC3H2Q9HBD1 STAG3L5P-204ENST00000443759 179 ntBASIC2.54□□□□□ -2
RC3H2Q9HBD1 IGLV3-17-201ENST00000519099 244 ntBASIC2.54□□□□□ -2
RC3H2Q9HBD1 MIR5007-201ENST00000583098 95 ntBASIC2.54□□□□□ -2
RC3H2Q9HBD1 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.54□□□□□ -2
RC3H2Q9HBD1 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RC3H2Q9HBD1 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RC3H2Q9HBD1 RNU6-776P-201ENST00000364403 104 ntBASIC2.53□□□□□ -2
RC3H2Q9HBD1 Y_RNA.247-201ENST00000364500 92 ntBASIC2.53□□□□□ -2
RC3H2Q9HBD1 RNU6-1022P-201ENST00000365049 104 ntBASIC2.53□□□□□ -2
RC3H2Q9HBD1 RNU6-163P-201ENST00000384396 106 ntBASIC2.53□□□□□ -2
RC3H2Q9HBD1 RNU1-148P-201ENST00000384472 162 ntBASIC2.53□□□□□ -2
RC3H2Q9HBD1 SNORA26.6-201ENST00000391256 115 ntBASIC2.53□□□□□ -2
RC3H2Q9HBD1 SNORA11.4-201ENST00000408823 129 ntBASIC2.53□□□□□ -2
RC3H2Q9HBD1 Y_RNA.611-201ENST00000410682 108 ntBASIC2.53□□□□□ -2
RC3H2Q9HBD1 AC015922.2-201ENST00000435593 184 ntBASIC2.53□□□□□ -2
RC3H2Q9HBD1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.53□□□□□ -2
RC3H2Q9HBD1 MIR3169-201ENST00000578032 83 ntBASIC2.53□□□□□ -2
RC3H2Q9HBD1 MIR4658-201ENST00000584344 65 ntBASIC2.53□□□□□ -2
RC3H2Q9HBD1 AC067747.1-201ENST00000608026 250 ntBASIC2.53□□□□□ -2
RC3H2Q9HBD1 MIR376B-201ENST00000614515 100 ntBASIC2.53□□□□□ -2
RC3H2Q9HBD1 MIR548BB-201ENST00000626714 66 ntBASIC2.53□□□□□ -2
RC3H2Q9HBD1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.53□□□□□ -2
RC3H2Q9HBD1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RC3H2Q9HBD1 SNORA22.1-201ENST00000362701 134 ntBASIC2.52□□□□□ -2.01
RC3H2Q9HBD1 RNU6-509P-201ENST00000363519 107 ntBASIC2.52□□□□□ -2.01
RC3H2Q9HBD1 SNORA1.1-201ENST00000364671 133 ntBASIC2.52□□□□□ -2.01
RC3H2Q9HBD1 RNU6-652P-201ENST00000365488 107 ntBASIC2.52□□□□□ -2.01
RC3H2Q9HBD1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.52□□□□□ -2.01
RC3H2Q9HBD1 AC090844.1-201ENST00000422019 156 ntBASIC2.52□□□□□ -2.01
RC3H2Q9HBD1 RNA5SP33-201ENST00000516687 98 ntBASIC2.52□□□□□ -2.01
RC3H2Q9HBD1 MIR4439-201ENST00000583746 80 ntBASIC2.52□□□□□ -2.01
RC3H2Q9HBD1 MIR8054-201ENST00000620877 86 ntBASIC2.52□□□□□ -2.01
RC3H2Q9HBD1 AC027279.3-201ENST00000625055 122 ntBASIC2.52□□□□□ -2.01
RC3H2Q9HBD1 RNU1-58P-201ENST00000362413 163 ntBASIC2.51□□□□□ -2.01
RC3H2Q9HBD1 Y_RNA.430-201ENST00000384081 110 ntBASIC2.51□□□□□ -2.01
RC3H2Q9HBD1 RNU6-482P-201ENST00000391068 107 ntBASIC2.51□□□□□ -2.01
RC3H2Q9HBD1 SNORD77B-201ENST00000391112 67 ntBASIC2.51□□□□□ -2.01
RC3H2Q9HBD1 MIR1267-201ENST00000408723 78 ntBASIC2.51□□□□□ -2.01
RC3H2Q9HBD1 RNU6-1190P-201ENST00000410811 104 ntBASIC2.51□□□□□ -2.01
RC3H2Q9HBD1 AC073261.1-201ENST00000429409 121 ntBASIC2.51□□□□□ -2.01
RC3H2Q9HBD1 AC108210.2-201ENST00000503681 201 ntBASIC2.51□□□□□ -2.01
RC3H2Q9HBD1 AC108729.3-201ENST00000513484 108 ntBASIC2.51□□□□□ -2.01
RC3H2Q9HBD1 SNORA31.10-201ENST00000516482 106 ntBASIC2.51□□□□□ -2.01
RC3H2Q9HBD1 RNU6-1006P-201ENST00000516998 103 ntBASIC2.51□□□□□ -2.01
RC3H2Q9HBD1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.51□□□□□ -2.01
RC3H2Q9HBD1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.51□□□□□ -2.01
RC3H2Q9HBD1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.51□□□□□ -2.01
RC3H2Q9HBD1 MIR4662A-201ENST00000637499 67 ntBASIC2.51□□□□□ -2.01
RC3H2Q9HBD1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
RC3H2Q9HBD1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.5□□□□□ -2.01
RC3H2Q9HBD1 UBL5P1-201ENST00000507979 193 ntBASIC2.5□□□□□ -2.01
RC3H2Q9HBD1 AC103810.7-201ENST00000607821 91 ntBASIC2.5□□□□□ -2.01
RC3H2Q9HBD1 SEPT14P17-201ENST00000617978 177 ntBASIC2.5□□□□□ -2.01
RC3H2Q9HBD1 AL512310.12-203ENST00000640543 90 ntBASIC2.5□□□□□ -2.01
RC3H2Q9HBD1 Y_RNA.94-201ENST00000363068 106 ntBASIC2.49□□□□□ -2.01
RC3H2Q9HBD1 SNORA32-201ENST00000384072 121 ntBASIC2.49□□□□□ -2.01
RC3H2Q9HBD1 MIR524-201ENST00000385242 87 ntBASIC2.49□□□□□ -2.01
RC3H2Q9HBD1 RNU6-1307P-201ENST00000391012 103 ntBASIC2.49□□□□□ -2.01
RC3H2Q9HBD1 RNU11-3P-201ENST00000391111 133 ntBASIC2.49□□□□□ -2.01
RC3H2Q9HBD1 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.49□□□□□ -2.01
RC3H2Q9HBD1 Y_RNA.607-201ENST00000410597 98 ntBASIC2.49□□□□□ -2.01
RC3H2Q9HBD1 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.49□□□□□ -2.01
RC3H2Q9HBD1 RNU7-34P-201ENST00000459394 64 ntBASIC2.49□□□□□ -2.01
RC3H2Q9HBD1 RNA5SP82-201ENST00000516707 92 ntBASIC2.49□□□□□ -2.01
RC3H2Q9HBD1 RNA5SP137-201ENST00000516833 135 ntBASIC2.49□□□□□ -2.01
RC3H2Q9HBD1 AC096720.1-201ENST00000604441 183 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms