Protein–RNA interactions for Protein: Q9BR11

ZSWIM1, Zinc finger SWIM domain-containing protein 1, humanhuman

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM1Q9BR11 MIR548AR-201ENST00000582191 57 ntBASIC1.79□□□□□ -2.12
ZSWIM1Q9BR11 MIR6129-201ENST00000616087 109 ntBASIC1.79□□□□□ -2.12
ZSWIM1Q9BR11 AC095038.3-201ENST00000634439 195 ntBASIC1.79□□□□□ -2.12
ZSWIM1Q9BR11 AL596211.1-201ENST00000569873 2277 ntBASIC1.79□□□□□ -2.12
ZSWIM1Q9BR11 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
ZSWIM1Q9BR11 ICE2P2-201ENST00000483823 2787 ntBASIC1.79□□□□□ -2.12
ZSWIM1Q9BR11 RNU6-414P-201ENST00000363705 104 ntBASIC1.78□□□□□ -2.12
ZSWIM1Q9BR11 Y_RNA.528-201ENST00000384575 108 ntBASIC1.78□□□□□ -2.12
ZSWIM1Q9BR11 AL603825.1-201ENST00000438481 80 ntBASIC1.78□□□□□ -2.12
ZSWIM1Q9BR11 RPS29P29-201ENST00000456396 171 ntBASIC1.78□□□□□ -2.12
ZSWIM1Q9BR11 FAM106DP-201ENST00000586416 501 ntBASIC1.78□□□□□ -2.12
ZSWIM1Q9BR11 RNU6-439P-201ENST00000384188 106 ntBASIC1.77□□□□□ -2.13
ZSWIM1Q9BR11 Y_RNA.537-201ENST00000384626 109 ntBASIC1.77□□□□□ -2.13
ZSWIM1Q9BR11 MIR570-201ENST00000384917 97 ntBASIC1.77□□□□□ -2.13
ZSWIM1Q9BR11 MIR548A3-201ENST00000385297 97 ntBASIC1.77□□□□□ -2.13
ZSWIM1Q9BR11 MIR1263-201ENST00000408324 86 ntBASIC1.77□□□□□ -2.13
ZSWIM1Q9BR11 RNU7-73P-201ENST00000458743 63 ntBASIC1.77□□□□□ -2.13
ZSWIM1Q9BR11 RNU7-43P-201ENST00000516554 64 ntBASIC1.77□□□□□ -2.13
ZSWIM1Q9BR11 RNY4P20-201ENST00000516678 93 ntBASIC1.77□□□□□ -2.13
ZSWIM1Q9BR11 Y_RNA.709-201ENST00000516952 92 ntBASIC1.77□□□□□ -2.13
ZSWIM1Q9BR11 MTND5P34-201ENST00000568888 325 ntBASIC1.77□□□□□ -2.13
ZSWIM1Q9BR11 SNORA77B-201ENST00000578179 125 ntBASIC1.77□□□□□ -2.13
ZSWIM1Q9BR11 AC021443.1-201ENST00000604478 211 ntBASIC1.77□□□□□ -2.13
ZSWIM1Q9BR11 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.77□□□□□ -2.13
ZSWIM1Q9BR11 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.76□□□□□ -2.13
ZSWIM1Q9BR11 Y_RNA.140-201ENST00000363474 103 ntBASIC1.76□□□□□ -2.13
ZSWIM1Q9BR11 Y_RNA.164-201ENST00000363709 102 ntBASIC1.76□□□□□ -2.13
ZSWIM1Q9BR11 Y_RNA.298-201ENST00000364960 107 ntBASIC1.76□□□□□ -2.13
ZSWIM1Q9BR11 RNA5SP363-201ENST00000365072 115 ntBASIC1.76□□□□□ -2.13
ZSWIM1Q9BR11 RNY4P18-201ENST00000391107 89 ntBASIC1.76□□□□□ -2.13
ZSWIM1Q9BR11 RPL23AP6-201ENST00000446637 472 ntBASIC1.76□□□□□ -2.13
ZSWIM1Q9BR11 HMGN2P23-201ENST00000456759 269 ntBASIC1.76□□□□□ -2.13
ZSWIM1Q9BR11 Y_RNA.649-201ENST00000459077 103 ntBASIC1.76□□□□□ -2.13
ZSWIM1Q9BR11 RNU2-11P-201ENST00000459191 187 ntBASIC1.76□□□□□ -2.13
ZSWIM1Q9BR11 RNU7-53P-201ENST00000516705 60 ntBASIC1.76□□□□□ -2.13
ZSWIM1Q9BR11 SUMO2P16-201ENST00000519475 264 ntBASIC1.76□□□□□ -2.13
ZSWIM1Q9BR11 MIR4299-201ENST00000577899 72 ntBASIC1.76□□□□□ -2.13
ZSWIM1Q9BR11 MIR4305-201ENST00000583252 102 ntBASIC1.76□□□□□ -2.13
ZSWIM1Q9BR11 AL096840.1-201ENST00000603287 93 ntBASIC1.76□□□□□ -2.13
ZSWIM1Q9BR11 AL627230.6-201ENST00000611129 280 ntBASIC1.76□□□□□ -2.13
ZSWIM1Q9BR11 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
ZSWIM1Q9BR11 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
ZSWIM1Q9BR11 Y_RNA.198-201ENST00000364013 98 ntBASIC1.75□□□□□ -2.13
ZSWIM1Q9BR11 MIR676-201ENST00000390702 67 ntBASIC1.75□□□□□ -2.13
ZSWIM1Q9BR11 SNX2P2-201ENST00000424553 323 ntBASIC1.75□□□□□ -2.13
ZSWIM1Q9BR11 AC108729.3-201ENST00000513484 108 ntBASIC1.75□□□□□ -2.13
ZSWIM1Q9BR11 AC015688.6-201ENST00000577737 104 ntBASIC1.75□□□□□ -2.13
ZSWIM1Q9BR11 MIR4791-201ENST00000607666 84 ntBASIC1.75□□□□□ -2.13
ZSWIM1Q9BR11 AL121890.5-201ENST00000620848 304 ntBASIC1.75□□□□□ -2.13
ZSWIM1Q9BR11 AC021613.1-201ENST00000623880 111 ntBASIC1.75□□□□□ -2.13
ZSWIM1Q9BR11 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.75□□□□□ -2.13
ZSWIM1Q9BR11 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.75□□□□□ -2.13
ZSWIM1Q9BR11 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
ZSWIM1Q9BR11 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
ZSWIM1Q9BR11 RNU6-44P-201ENST00000384045 107 ntBASIC1.74□□□□□ -2.13
ZSWIM1Q9BR11 SNORD116-21-201ENST00000384507 92 ntBASIC1.74□□□□□ -2.13
ZSWIM1Q9BR11 RNU6-880P-201ENST00000384526 107 ntBASIC1.74□□□□□ -2.13
ZSWIM1Q9BR11 MIR513A1-201ENST00000385138 129 ntBASIC1.74□□□□□ -2.13
ZSWIM1Q9BR11 RNU6-1319P-201ENST00000390855 104 ntBASIC1.74□□□□□ -2.13
ZSWIM1Q9BR11 RNU6-747P-201ENST00000390928 104 ntBASIC1.74□□□□□ -2.13
ZSWIM1Q9BR11 RNU6-241P-201ENST00000391148 104 ntBASIC1.74□□□□□ -2.13
ZSWIM1Q9BR11 RNA5SP144-201ENST00000410846 116 ntBASIC1.74□□□□□ -2.13
ZSWIM1Q9BR11 RNU6-177P-201ENST00000411257 104 ntBASIC1.74□□□□□ -2.13
ZSWIM1Q9BR11 AC063976.4-201ENST00000421971 163 ntBASIC1.74□□□□□ -2.13
ZSWIM1Q9BR11 RNU7-164P-201ENST00000459221 62 ntBASIC1.74□□□□□ -2.13
ZSWIM1Q9BR11 RNU7-123P-201ENST00000515911 60 ntBASIC1.74□□□□□ -2.13
ZSWIM1Q9BR11 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.74□□□□□ -2.13
ZSWIM1Q9BR11 HSPE1P19-201ENST00000603327 295 ntBASIC1.74□□□□□ -2.13
ZSWIM1Q9BR11 AC103810.8-201ENST00000607347 118 ntBASIC1.74□□□□□ -2.13
ZSWIM1Q9BR11 AC243994.1-201ENST00000618627 109 ntBASIC1.74□□□□□ -2.13
ZSWIM1Q9BR11 AC106754.2-201ENST00000623006 233 ntBASIC1.74□□□□□ -2.13
ZSWIM1Q9BR11 MIR302B-201ENST00000362188 73 ntBASIC1.73□□□□□ -2.13
ZSWIM1Q9BR11 MIR342-201ENST00000362212 99 ntBASIC1.73□□□□□ -2.13
ZSWIM1Q9BR11 RNU6-755P-201ENST00000364400 103 ntBASIC1.73□□□□□ -2.13
ZSWIM1Q9BR11 RNU6-1067P-201ENST00000384752 107 ntBASIC1.73□□□□□ -2.13
ZSWIM1Q9BR11 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.73□□□□□ -2.13
ZSWIM1Q9BR11 SNORA26.6-201ENST00000391256 115 ntBASIC1.73□□□□□ -2.13
ZSWIM1Q9BR11 RNU6-322P-201ENST00000516010 103 ntBASIC1.73□□□□□ -2.13
ZSWIM1Q9BR11 RNU2-35P-201ENST00000516446 142 ntBASIC1.73□□□□□ -2.13
ZSWIM1Q9BR11 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.73□□□□□ -2.13
ZSWIM1Q9BR11 MIR4764-201ENST00000580680 88 ntBASIC1.73□□□□□ -2.13
ZSWIM1Q9BR11 MIR8074-201ENST00000615081 81 ntBASIC1.73□□□□□ -2.13
ZSWIM1Q9BR11 MIR6841-201ENST00000637129 72 ntBASIC1.73□□□□□ -2.13
ZSWIM1Q9BR11 Y_RNA.35-201ENST00000362601 101 ntBASIC1.72□□□□□ -2.13
ZSWIM1Q9BR11 RNU4-16P-201ENST00000364737 141 ntBASIC1.72□□□□□ -2.13
ZSWIM1Q9BR11 Y_RNA.430-201ENST00000384081 110 ntBASIC1.72□□□□□ -2.13
ZSWIM1Q9BR11 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
ZSWIM1Q9BR11 POLR2J4-204ENST00000418424 324 ntBASIC1.72□□□□□ -2.13
ZSWIM1Q9BR11 RNU7-67P-201ENST00000459003 62 ntBASIC1.72□□□□□ -2.13
ZSWIM1Q9BR11 SNORA25.15-201ENST00000516487 89 ntBASIC1.72□□□□□ -2.13
ZSWIM1Q9BR11 RNU6-958P-201ENST00000516995 106 ntBASIC1.72□□□□□ -2.13
ZSWIM1Q9BR11 DNAJC19P9-201ENST00000555084 351 ntBASIC1.72□□□□□ -2.13
ZSWIM1Q9BR11 MIR4679-2-201ENST00000578358 77 ntBASIC1.72□□□□□ -2.13
ZSWIM1Q9BR11 AL020996.3-201ENST00000606617 222 ntBASIC1.72□□□□□ -2.13
ZSWIM1Q9BR11 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.72□□□□□ -2.13
ZSWIM1Q9BR11 AC008133.2-201ENST00000624540 351 ntBASIC1.72□□□□□ -2.13
ZSWIM1Q9BR11 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
ZSWIM1Q9BR11 Y_RNA.213-201ENST00000364178 111 ntBASIC1.71□□□□□ -2.14
ZSWIM1Q9BR11 Y_RNA.281-201ENST00000364774 94 ntBASIC1.71□□□□□ -2.14
ZSWIM1Q9BR11 RNU6-913P-201ENST00000390913 95 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 238.8 ms