Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 RNU2-35P-201ENST00000516446 142 ntBASIC1.78□□□□□ -2.12
PDLIM2Q96JY6 MIR3683-201ENST00000580847 82 ntBASIC1.78□□□□□ -2.12
PDLIM2Q96JY6 MIR424-201ENST00000362227 98 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 Y_RNA.85-201ENST00000363014 111 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 RNU6-1104P-201ENST00000384723 104 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 MIR583-201ENST00000384846 75 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 MT-TI-201ENST00000387365 69 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 SNORD123-201ENST00000459473 70 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 RNU6-958P-201ENST00000516995 106 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 AC022523.2-201ENST00000561045 150 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 MIR7974-201ENST00000615835 79 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 AL035470.1-201ENST00000622571 220 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 AL589743.1-201ENST00000551932 2712 ntBASIC1.77□□□□□ -2.13
PDLIM2Q96JY6 RNU6-457P-201ENST00000363999 107 ntBASIC1.76□□□□□ -2.13
PDLIM2Q96JY6 SNORA70.7-201ENST00000384159 133 ntBASIC1.76□□□□□ -2.13
PDLIM2Q96JY6 RNU6-106P-201ENST00000384405 107 ntBASIC1.76□□□□□ -2.13
PDLIM2Q96JY6 RNU6-360P-201ENST00000390944 104 ntBASIC1.76□□□□□ -2.13
PDLIM2Q96JY6 RNU7-45P-201ENST00000459460 63 ntBASIC1.76□□□□□ -2.13
PDLIM2Q96JY6 SNORA31.4-201ENST00000516049 129 ntBASIC1.76□□□□□ -2.13
PDLIM2Q96JY6 RNU2-19P-201ENST00000517288 84 ntBASIC1.76□□□□□ -2.13
PDLIM2Q96JY6 MIR548AR-201ENST00000582191 57 ntBASIC1.76□□□□□ -2.13
PDLIM2Q96JY6 FAM106DP-201ENST00000586416 501 ntBASIC1.76□□□□□ -2.13
PDLIM2Q96JY6 AC021613.1-201ENST00000623880 111 ntBASIC1.76□□□□□ -2.13
PDLIM2Q96JY6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
PDLIM2Q96JY6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 Y_RNA.362-201ENST00000365518 110 ntBASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 SNORD28B-201ENST00000390993 75 ntBASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 RNA5SP89-201ENST00000410300 108 ntBASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 RNA5SP144-201ENST00000410846 116 ntBASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 AL022718.1-201ENST00000412004 84 ntBASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 RPS29P29-201ENST00000456396 171 ntBASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 RNU6-168P-201ENST00000516189 101 ntBASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 RNA5SP61-201ENST00000516453 100 ntBASIC1.75□□□□□ -2.13
PDLIM2Q96JY6 RNA5SP276-201ENST00000362580 94 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 Y_RNA.49-201ENST00000362714 112 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 MIR504-201ENST00000385065 83 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 U8.13-201ENST00000390842 128 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 SNORA40.18-201ENST00000391200 128 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 RNU6-554P-201ENST00000410466 106 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 AL512326.2-201ENST00000426359 151 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 AC055731.1-201ENST00000474387 401 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 RNA5SP182-201ENST00000516064 82 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 RNU7-53P-201ENST00000516705 60 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 MIR4255-201ENST00000579351 72 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 MIR4287-201ENST00000579398 78 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 MIR3163-201ENST00000581592 73 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 MIR6845-201ENST00000613182 61 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 AC243994.1-201ENST00000618627 109 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 AC106754.2-201ENST00000623006 233 ntBASIC1.74□□□□□ -2.13
PDLIM2Q96JY6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 RNU6-1014P-201ENST00000383940 103 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 RNU6-32P-201ENST00000383948 107 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 RNU6-203P-201ENST00000384038 104 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 RNU6-13P-201ENST00000384248 107 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 Y_RNA.495-201ENST00000384435 112 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 RNU6-12P-201ENST00000384604 107 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 RNU6-41P-201ENST00000384741 107 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 RNU6-1067P-201ENST00000384752 107 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 MIR548D2-201ENST00000384955 97 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 MIR1302-5-201ENST00000408164 150 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 RNU7-6P-201ENST00000516845 62 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 RNU6-295P-201ENST00000516901 104 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 MIR3152-201ENST00000579801 74 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 MIR7843-201ENST00000622274 79 ntBASIC1.73□□□□□ -2.13
PDLIM2Q96JY6 RNU6-1123P-201ENST00000362347 106 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 RNU6-1298P-201ENST00000362456 101 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 Y_RNA.163-201ENST00000363702 113 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 Y_RNA.344-201ENST00000365381 112 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 RNU6-1319P-201ENST00000390855 104 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 RNU6-747P-201ENST00000390928 104 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 RNU6-241P-201ENST00000391148 104 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 RNU6-177P-201ENST00000411257 104 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 RPL23AP42-201ENST00000471152 471 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 RPL39P34-201ENST00000477141 156 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 SNORA74.3-201ENST00000517108 154 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 AC004812.1-201ENST00000540773 146 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 MIR4791-201ENST00000607666 84 ntBASIC1.72□□□□□ -2.13
PDLIM2Q96JY6 Y_RNA.531-201ENST00000384589 121 ntBASIC1.71□□□□□ -2.14
PDLIM2Q96JY6 POLR2J4-204ENST00000418424 324 ntBASIC1.71□□□□□ -2.14
PDLIM2Q96JY6 RPL23AP6-201ENST00000446637 472 ntBASIC1.71□□□□□ -2.14
PDLIM2Q96JY6 RNU2-13P-201ENST00000515909 113 ntBASIC1.71□□□□□ -2.14
PDLIM2Q96JY6 RNU6-970P-201ENST00000516312 107 ntBASIC1.71□□□□□ -2.14
PDLIM2Q96JY6 RNA5SP170-201ENST00000517150 101 ntBASIC1.71□□□□□ -2.14
PDLIM2Q96JY6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.71□□□□□ -2.14
PDLIM2Q96JY6 Y_RNA.171-201ENST00000363760 102 ntBASIC1.7□□□□□ -2.14
PDLIM2Q96JY6 U8.6-201ENST00000364939 135 ntBASIC1.7□□□□□ -2.14
PDLIM2Q96JY6 Y_RNA.309-201ENST00000365046 111 ntBASIC1.7□□□□□ -2.14
PDLIM2Q96JY6 Y_RNA.323-201ENST00000365157 109 ntBASIC1.7□□□□□ -2.14
PDLIM2Q96JY6 RNU6-756P-201ENST00000383997 107 ntBASIC1.7□□□□□ -2.14
PDLIM2Q96JY6 SNORA24-201ENST00000384096 131 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 209.5 ms