Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 RNU6-484P-201ENST00000384016 107 ntBASIC0.47□□□□□ -2.33
CCDC83Q8IWF9 Y_RNA.572-201ENST00000384757 98 ntBASIC0.47□□□□□ -2.33
CCDC83Q8IWF9 RNA5SP193-201ENST00000410353 107 ntBASIC0.47□□□□□ -2.33
CCDC83Q8IWF9 AC015818.7-201ENST00000428754 109 ntBASIC0.47□□□□□ -2.33
CCDC83Q8IWF9 AF228730.3-201ENST00000436691 102 ntBASIC0.47□□□□□ -2.33
CCDC83Q8IWF9 AC087499.7-201ENST00000441958 109 ntBASIC0.47□□□□□ -2.33
CCDC83Q8IWF9 RNU7-56P-201ENST00000458744 62 ntBASIC0.47□□□□□ -2.33
CCDC83Q8IWF9 RNU6-998P-201ENST00000515894 101 ntBASIC0.47□□□□□ -2.33
CCDC83Q8IWF9 RNU6-1137P-201ENST00000517073 99 ntBASIC0.47□□□□□ -2.33
CCDC83Q8IWF9 AC097639.2-201ENST00000603159 172 ntBASIC0.47□□□□□ -2.33
CCDC83Q8IWF9 MIR18A-201ENST00000362310 71 ntBASIC0.46□□□□□ -2.34
CCDC83Q8IWF9 Y_RNA.44-201ENST00000362676 108 ntBASIC0.46□□□□□ -2.34
CCDC83Q8IWF9 Y_RNA.634-201ENST00000364811 113 ntBASIC0.46□□□□□ -2.34
CCDC83Q8IWF9 SNORD77.3-201ENST00000391113 65 ntBASIC0.46□□□□□ -2.34
CCDC83Q8IWF9 MIR938-201ENST00000401216 83 ntBASIC0.46□□□□□ -2.34
CCDC83Q8IWF9 RNU6-1165P-201ENST00000410119 107 ntBASIC0.46□□□□□ -2.34
CCDC83Q8IWF9 RNU2-70P-201ENST00000410718 179 ntBASIC0.46□□□□□ -2.34
CCDC83Q8IWF9 RNU6-602P-201ENST00000411155 105 ntBASIC0.46□□□□□ -2.34
CCDC83Q8IWF9 snoU13.2-201ENST00000459201 104 ntBASIC0.46□□□□□ -2.34
CCDC83Q8IWF9 MIR3612-201ENST00000579753 87 ntBASIC0.46□□□□□ -2.34
CCDC83Q8IWF9 AL356055.1-201ENST00000602528 446 ntBASIC0.46□□□□□ -2.34
CCDC83Q8IWF9 uc_338.6-201ENST00000613544 171 ntBASIC0.46□□□□□ -2.34
CCDC83Q8IWF9 AC010332.2-201ENST00000613083 1904 ntBASIC0.46□□□□□ -2.34
CCDC83Q8IWF9 RNU6-797P-201ENST00000363101 109 ntBASIC0.45□□□□□ -2.34
CCDC83Q8IWF9 SNORA33.2-201ENST00000365413 134 ntBASIC0.45□□□□□ -2.34
CCDC83Q8IWF9 RNU6-1189P-201ENST00000383958 107 ntBASIC0.45□□□□□ -2.34
CCDC83Q8IWF9 Y_RNA.432-201ENST00000384087 111 ntBASIC0.45□□□□□ -2.34
CCDC83Q8IWF9 MIR588-201ENST00000384900 83 ntBASIC0.45□□□□□ -2.34
CCDC83Q8IWF9 MIR548I3-201ENST00000408378 149 ntBASIC0.45□□□□□ -2.34
CCDC83Q8IWF9 HMGN1P33-201ENST00000432945 451 ntBASIC0.45□□□□□ -2.34
CCDC83Q8IWF9 MTCYBP6-201ENST00000441810 138 ntBASIC0.45□□□□□ -2.34
CCDC83Q8IWF9 SNORD2.1-201ENST00000458762 69 ntBASIC0.45□□□□□ -2.34
CCDC83Q8IWF9 MIR1273G-201ENST00000577677 100 ntBASIC0.45□□□□□ -2.34
CCDC83Q8IWF9 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.45□□□□□ -2.34
CCDC83Q8IWF9 Y_RNA.82-201ENST00000363000 102 ntBASIC0.44□□□□□ -2.34
CCDC83Q8IWF9 Y_RNA.91-201ENST00000363042 107 ntBASIC0.44□□□□□ -2.34
CCDC83Q8IWF9 Y_RNA.92-201ENST00000363043 102 ntBASIC0.44□□□□□ -2.34
CCDC83Q8IWF9 Y_RNA.117-201ENST00000363294 101 ntBASIC0.44□□□□□ -2.34
CCDC83Q8IWF9 Y_RNA.235-201ENST00000364412 102 ntBASIC0.44□□□□□ -2.34
CCDC83Q8IWF9 Y_RNA.306-201ENST00000365015 102 ntBASIC0.44□□□□□ -2.34
CCDC83Q8IWF9 Y_RNA.312-201ENST00000365089 102 ntBASIC0.44□□□□□ -2.34
CCDC83Q8IWF9 Y_RNA.322-201ENST00000365151 102 ntBASIC0.44□□□□□ -2.34
CCDC83Q8IWF9 VTRNA1-3-201ENST00000365645 89 ntBASIC0.44□□□□□ -2.34
CCDC83Q8IWF9 RNU6-639P-201ENST00000384074 107 ntBASIC0.44□□□□□ -2.34
CCDC83Q8IWF9 Y_RNA.440-201ENST00000384120 114 ntBASIC0.44□□□□□ -2.34
CCDC83Q8IWF9 Y_RNA.650-201ENST00000459002 102 ntBASIC0.44□□□□□ -2.34
CCDC83Q8IWF9 RNU2-11P-201ENST00000459191 187 ntBASIC0.44□□□□□ -2.34
CCDC83Q8IWF9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.44□□□□□ -2.34
CCDC83Q8IWF9 Y_RNA.777-201ENST00000516982 102 ntBASIC0.44□□□□□ -2.34
CCDC83Q8IWF9 RNU6-570P-201ENST00000517051 105 ntBASIC0.44□□□□□ -2.34
CCDC83Q8IWF9 Y_RNA.771-201ENST00000598668 102 ntBASIC0.44□□□□□ -2.34
CCDC83Q8IWF9 AP001282.2-201ENST00000616149 309 ntBASIC0.44□□□□□ -2.34
CCDC83Q8IWF9 MIR6779-201ENST00000617283 64 ntBASIC0.44□□□□□ -2.34
CCDC83Q8IWF9 Y_RNA.789-201ENST00000622480 102 ntBASIC0.44□□□□□ -2.34
CCDC83Q8IWF9 Y_RNA.205-201ENST00000364128 113 ntBASIC0.43□□□□□ -2.34
CCDC83Q8IWF9 MIR563-201ENST00000385080 79 ntBASIC0.43□□□□□ -2.34
CCDC83Q8IWF9 MIR616-201ENST00000385293 97 ntBASIC0.43□□□□□ -2.34
CCDC83Q8IWF9 TRBVB-201ENST00000477100 408 ntBASIC0.43□□□□□ -2.34
CCDC83Q8IWF9 RNU6-1309P-201ENST00000363305 108 ntBASIC0.42□□□□□ -2.34
CCDC83Q8IWF9 RNU6-740P-201ENST00000364734 105 ntBASIC0.42□□□□□ -2.34
CCDC83Q8IWF9 MIR125B2-201ENST00000385128 89 ntBASIC0.42□□□□□ -2.34
CCDC83Q8IWF9 MT-TF-201ENST00000387314 71 ntBASIC0.42□□□□□ -2.34
CCDC83Q8IWF9 RNU6-1228P-201ENST00000391014 107 ntBASIC0.42□□□□□ -2.34
CCDC83Q8IWF9 MIR1257-201ENST00000408490 117 ntBASIC0.42□□□□□ -2.34
CCDC83Q8IWF9 AL138752.1-201ENST00000452964 351 ntBASIC0.42□□□□□ -2.34
CCDC83Q8IWF9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC83Q8IWF9 SNRPGP8-201ENST00000454064 226 ntBASIC0.42□□□□□ -2.34
CCDC83Q8IWF9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.42□□□□□ -2.34
CCDC83Q8IWF9 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.42□□□□□ -2.34
CCDC83Q8IWF9 U2.14-201ENST00000615943 113 ntBASIC0.42□□□□□ -2.34
CCDC83Q8IWF9 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
CCDC83Q8IWF9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
CCDC83Q8IWF9 RNU6-1109P-201ENST00000391187 107 ntBASIC0.41□□□□□ -2.34
CCDC83Q8IWF9 SNORD100-201ENST00000408573 76 ntBASIC0.41□□□□□ -2.34
CCDC83Q8IWF9 RNU6-1190P-201ENST00000410811 104 ntBASIC0.41□□□□□ -2.34
CCDC83Q8IWF9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC83Q8IWF9 RNU7-185P-201ENST00000459215 60 ntBASIC0.41□□□□□ -2.34
CCDC83Q8IWF9 Y_RNA.701-201ENST00000516812 110 ntBASIC0.41□□□□□ -2.34
CCDC83Q8IWF9 AC090897.1-201ENST00000580909 226 ntBASIC0.41□□□□□ -2.34
CCDC83Q8IWF9 AL162730.1-201ENST00000605734 292 ntBASIC0.41□□□□□ -2.34
CCDC83Q8IWF9 MIR335-201ENST00000362173 94 ntBASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 Y_RNA.7-201ENST00000362352 102 ntBASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 Y_RNA.237-201ENST00000364439 102 ntBASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 RNU6-364P-201ENST00000384387 107 ntBASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 RNU6-713P-201ENST00000384761 107 ntBASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 MT-TT-201ENST00000387460 66 ntBASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 RNU6-1319P-201ENST00000390855 104 ntBASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 RNU6-747P-201ENST00000390928 104 ntBASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 RNU6-241P-201ENST00000391148 104 ntBASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 AL606845.1-201ENST00000404881 255 ntBASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 RNU6-447P-201ENST00000410293 104 ntBASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 RNU6-1118P-201ENST00000410382 104 ntBASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 RNU6-1076P-201ENST00000410397 104 ntBASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 RNU6-355P-201ENST00000410427 104 ntBASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 RNU6-791P-201ENST00000410467 104 ntBASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 RNU6-705P-201ENST00000410601 104 ntBASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 RNU6-1100P-201ENST00000410691 104 ntBASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 RNU6-860P-201ENST00000410860 104 ntBASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 RNU6-1217P-201ENST00000411276 104 ntBASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 RNU6-785P-201ENST00000411324 104 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 193.1 ms