Protein–RNA interactions for Protein: Q3L8U1

CHD9, Chromodomain-helicase-DNA-binding protein 9, humanhuman

Predictions only

Length 2,897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9Q3L8U1 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.79□□□□□ -2.54
CHD9Q3L8U1 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.79□□□□□ -2.54
CHD9Q3L8U1 snoU83B.1-201ENST00000517136 88 ntBASIC-0.79□□□□□ -2.54
CHD9Q3L8U1 MTND5P40-201ENST00000559945 246 ntBASIC-0.79□□□□□ -2.54
CHD9Q3L8U1 MIR4273-201ENST00000582824 84 ntBASIC-0.79□□□□□ -2.54
CHD9Q3L8U1 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.79□□□□□ -2.54
CHD9Q3L8U1 RNU6-931P-201ENST00000363850 107 ntBASIC-0.79□□□□□ -2.54
CHD9Q3L8U1 RNU6-595P-201ENST00000363944 107 ntBASIC-0.79□□□□□ -2.54
CHD9Q3L8U1 RNU6-456P-201ENST00000384493 107 ntBASIC-0.79□□□□□ -2.54
CHD9Q3L8U1 RNU6-429P-201ENST00000384582 108 ntBASIC-0.79□□□□□ -2.54
CHD9Q3L8U1 RNU6-636P-201ENST00000384598 107 ntBASIC-0.79□□□□□ -2.54
CHD9Q3L8U1 RNU6-938P-201ENST00000411285 103 ntBASIC-0.79□□□□□ -2.54
CHD9Q3L8U1 AC016907.1-201ENST00000419483 435 ntBASIC-0.79□□□□□ -2.54
CHD9Q3L8U1 RNU7-180P-201ENST00000459240 63 ntBASIC-0.79□□□□□ -2.54
CHD9Q3L8U1 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.79□□□□□ -2.54
CHD9Q3L8U1 RNU6-899P-201ENST00000363947 107 ntBASIC-0.8□□□□□ -2.54
CHD9Q3L8U1 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.8□□□□□ -2.54
CHD9Q3L8U1 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.8□□□□□ -2.54
CHD9Q3L8U1 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.8□□□□□ -2.54
CHD9Q3L8U1 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.8□□□□□ -2.54
CHD9Q3L8U1 MIR518B-201ENST00000385127 83 ntBASIC-0.8□□□□□ -2.54
CHD9Q3L8U1 AC097635.1-201ENST00000450678 155 ntBASIC-0.8□□□□□ -2.54
CHD9Q3L8U1 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.8□□□□□ -2.54
CHD9Q3L8U1 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-0.8□□□□□ -2.54
CHD9Q3L8U1 MIR4520-1-201ENST00000582609 70 ntBASIC-0.8□□□□□ -2.54
CHD9Q3L8U1 AP001330.5-201ENST00000607176 411 ntBASIC-0.8□□□□□ -2.54
CHD9Q3L8U1 RNU6-708P-201ENST00000384217 107 ntBASIC-0.8□□□□□ -2.54
CHD9Q3L8U1 SNORD61-201ENST00000384252 73 ntBASIC-0.8□□□□□ -2.54
CHD9Q3L8U1 MTATP6P13-201ENST00000438531 667 ntBASIC-0.8□□□□□ -2.54
CHD9Q3L8U1 SNORD2-201ENST00000459163 69 ntBASIC-0.8□□□□□ -2.54
CHD9Q3L8U1 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.8□□□□□ -2.54
CHD9Q3L8U1 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.8□□□□□ -2.54
CHD9Q3L8U1 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.81□□□□□ -2.54
CHD9Q3L8U1 RNU6-254P-201ENST00000363377 107 ntBASIC-0.81□□□□□ -2.54
CHD9Q3L8U1 RNU4-28P-201ENST00000364739 141 ntBASIC-0.81□□□□□ -2.54
CHD9Q3L8U1 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.81□□□□□ -2.54
CHD9Q3L8U1 RNA5SP475-201ENST00000410568 110 ntBASIC-0.81□□□□□ -2.54
CHD9Q3L8U1 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.81□□□□□ -2.54
CHD9Q3L8U1 AC098614.3-201ENST00000438957 440 ntBASIC-0.81□□□□□ -2.54
CHD9Q3L8U1 RNU6-531P-201ENST00000516694 104 ntBASIC-0.81□□□□□ -2.54
CHD9Q3L8U1 MIR2355-201ENST00000517199 87 ntBASIC-0.81□□□□□ -2.54
CHD9Q3L8U1 MIR3129-201ENST00000581095 76 ntBASIC-0.81□□□□□ -2.54
CHD9Q3L8U1 AC018638.8-201ENST00000588755 281 ntBASIC-0.81□□□□□ -2.54
CHD9Q3L8U1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.81□□□□□ -2.54
CHD9Q3L8U1 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.81□□□□□ -2.54
CHD9Q3L8U1 RNU6-660P-201ENST00000364566 109 ntBASIC-0.81□□□□□ -2.54
CHD9Q3L8U1 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.81□□□□□ -2.54
CHD9Q3L8U1 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.81□□□□□ -2.54
CHD9Q3L8U1 SNORA49-201ENST00000386157 136 ntBASIC-0.81□□□□□ -2.54
CHD9Q3L8U1 SNORA40.3-201ENST00000390964 122 ntBASIC-0.81□□□□□ -2.54
CHD9Q3L8U1 AL593851.1-201ENST00000426171 157 ntBASIC-0.81□□□□□ -2.54
CHD9Q3L8U1 RNU6-175P-201ENST00000516896 107 ntBASIC-0.81□□□□□ -2.54
CHD9Q3L8U1 AC100767.1-201ENST00000528178 123 ntBASIC-0.81□□□□□ -2.54
CHD9Q3L8U1 AC245505.1-201ENST00000556398 224 ntBASIC-0.81□□□□□ -2.54
CHD9Q3L8U1 MIR3672-201ENST00000584290 82 ntBASIC-0.81□□□□□ -2.54
CHD9Q3L8U1 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.82□□□□□ -2.54
CHD9Q3L8U1 CHEK2P4-201ENST00000450340 246 ntBASIC-0.82□□□□□ -2.54
CHD9Q3L8U1 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-0.82□□□□□ -2.54
CHD9Q3L8U1 MIR548AB-201ENST00000584917 84 ntBASIC-0.82□□□□□ -2.54
CHD9Q3L8U1 AC073648.5-201ENST00000603502 305 ntBASIC-0.82□□□□□ -2.54
CHD9Q3L8U1 AL158063.1-201ENST00000615349 536 ntBASIC-0.82□□□□□ -2.54
CHD9Q3L8U1 AP001506.1-201ENST00000615444 211 ntBASIC-0.82□□□□□ -2.54
CHD9Q3L8U1 RNU6-710P-201ENST00000410424 105 ntBASIC-0.82□□□□□ -2.54
CHD9Q3L8U1 AL356010.1-201ENST00000456364 102 ntBASIC-0.82□□□□□ -2.54
CHD9Q3L8U1 RNU7-87P-201ENST00000459343 62 ntBASIC-0.82□□□□□ -2.54
CHD9Q3L8U1 AC127455.1-201ENST00000565496 145 ntBASIC-0.82□□□□□ -2.54
CHD9Q3L8U1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.82□□□□□ -2.54
CHD9Q3L8U1 YWHAEP2-201ENST00000580066 112 ntBASIC-0.82□□□□□ -2.54
CHD9Q3L8U1 AL021368.1-201ENST00000607490 540 ntBASIC-0.82□□□□□ -2.54
CHD9Q3L8U1 AC098479.1-201ENST00000609225 154 ntBASIC-0.82□□□□□ -2.54
CHD9Q3L8U1 AC132825.6-201ENST00000638861 357 ntBASIC-0.82□□□□□ -2.54
CHD9Q3L8U1 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.82□□□□□ -2.54
CHD9Q3L8U1 RNU6-913P-201ENST00000390913 95 ntBASIC-0.82□□□□□ -2.54
CHD9Q3L8U1 SNORA18.6-201ENST00000516792 115 ntBASIC-0.82□□□□□ -2.54
CHD9Q3L8U1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-0.82□□□□□ -2.54
CHD9Q3L8U1 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 MIR5188-201ENST00000583467 113 ntBASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 MIR382-201ENST00000637119 76 ntBASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 MIR507-201ENST00000385234 94 ntBASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 RNU2-61P-201ENST00000411069 191 ntBASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 MTCYBP8-201ENST00000422855 651 ntBASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 MTND1P27-201ENST00000451117 902 ntBASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 RNA5SP484-201ENST00000458857 111 ntBASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 snoU109.3-201ENST00000459477 145 ntBASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 RNU6-470P-201ENST00000515954 104 ntBASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 AC124303.1-201ENST00000605703 360 ntBASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 AL121655.1-201ENST00000605811 308 ntBASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 MIR548AY-201ENST00000617669 107 ntBASIC-0.83□□□□□ -2.54
CHD9Q3L8U1 SNORD114-10-201ENST00000363409 72 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms