Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 Y_RNA.4-201ENST00000362333 112 ntBASIC2.69□□□□□ -1.98
ECM1Q16610 Y_RNA.95-201ENST00000363079 95 ntBASIC2.69□□□□□ -1.98
ECM1Q16610 RNU6-1229P-201ENST00000364295 107 ntBASIC2.69□□□□□ -1.98
ECM1Q16610 MIR889-201ENST00000401280 79 ntBASIC2.69□□□□□ -1.98
ECM1Q16610 Y_RNA.607-201ENST00000410597 98 ntBASIC2.69□□□□□ -1.98
ECM1Q16610 RNU6-887P-201ENST00000410660 100 ntBASIC2.69□□□□□ -1.98
ECM1Q16610 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.69□□□□□ -1.98
ECM1Q16610 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.69□□□□□ -1.98
ECM1Q16610 RNU6-1006P-201ENST00000516998 103 ntBASIC2.69□□□□□ -1.98
ECM1Q16610 MIR548BB-201ENST00000626714 66 ntBASIC2.69□□□□□ -1.98
ECM1Q16610 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
ECM1Q16610 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
ECM1Q16610 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
ECM1Q16610 Y_RNA.96-201ENST00000363092 109 ntBASIC2.68□□□□□ -1.98
ECM1Q16610 RNU4-67P-201ENST00000364569 141 ntBASIC2.68□□□□□ -1.98
ECM1Q16610 Y_RNA.377-201ENST00000365644 108 ntBASIC2.68□□□□□ -1.98
ECM1Q16610 RNU6-409P-201ENST00000384114 104 ntBASIC2.68□□□□□ -1.98
ECM1Q16610 RNU6-679P-201ENST00000391003 106 ntBASIC2.68□□□□□ -1.98
ECM1Q16610 RPS12P2-201ENST00000439728 269 ntBASIC2.68□□□□□ -1.98
ECM1Q16610 AL513328.1-201ENST00000446460 224 ntBASIC2.68□□□□□ -1.98
ECM1Q16610 AC011753.1-201ENST00000451001 220 ntBASIC2.68□□□□□ -1.98
ECM1Q16610 Y_RNA.659-201ENST00000515994 113 ntBASIC2.68□□□□□ -1.98
ECM1Q16610 RNU7-53P-201ENST00000516705 60 ntBASIC2.68□□□□□ -1.98
ECM1Q16610 Y_RNA.705-201ENST00000516862 110 ntBASIC2.68□□□□□ -1.98
ECM1Q16610 MIR3152-201ENST00000579801 74 ntBASIC2.68□□□□□ -1.98
ECM1Q16610 AC095038.3-201ENST00000634439 195 ntBASIC2.68□□□□□ -1.98
ECM1Q16610 MIR342-201ENST00000362212 99 ntBASIC2.67□□□□□ -1.98
ECM1Q16610 Y_RNA.316-201ENST00000365118 111 ntBASIC2.67□□□□□ -1.98
ECM1Q16610 Y_RNA.467-201ENST00000384297 102 ntBASIC2.67□□□□□ -1.98
ECM1Q16610 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.67□□□□□ -1.98
ECM1Q16610 RPS23P4-201ENST00000487908 423 ntBASIC2.67□□□□□ -1.98
ECM1Q16610 HSPE1P19-201ENST00000603327 295 ntBASIC2.67□□□□□ -1.98
ECM1Q16610 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.67□□□□□ -1.98
ECM1Q16610 MIR1291-201ENST00000627649 87 ntBASIC2.67□□□□□ -1.98
ECM1Q16610 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.67□□□□□ -1.98
ECM1Q16610 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.67□□□□□ -1.98
ECM1Q16610 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.66□□□□□ -1.98
ECM1Q16610 Y_RNA.155-201ENST00000363632 101 ntBASIC2.66□□□□□ -1.98
ECM1Q16610 SNORD58A-201ENST00000383875 65 ntBASIC2.66□□□□□ -1.98
ECM1Q16610 SNORA18-201ENST00000384416 132 ntBASIC2.66□□□□□ -1.98
ECM1Q16610 RNY1P4-201ENST00000384595 115 ntBASIC2.66□□□□□ -1.98
ECM1Q16610 MIR516B2-201ENST00000385190 85 ntBASIC2.66□□□□□ -1.98
ECM1Q16610 Y_RNA.611-201ENST00000410682 108 ntBASIC2.66□□□□□ -1.98
ECM1Q16610 RNU2-40P-201ENST00000410833 196 ntBASIC2.66□□□□□ -1.98
ECM1Q16610 AC055731.1-201ENST00000474387 401 ntBASIC2.66□□□□□ -1.98
ECM1Q16610 AC234781.5-201ENST00000508429 271 ntBASIC2.66□□□□□ -1.98
ECM1Q16610 RNU6-322P-201ENST00000516010 103 ntBASIC2.66□□□□□ -1.98
ECM1Q16610 SNORA31.4-201ENST00000516049 129 ntBASIC2.66□□□□□ -1.98
ECM1Q16610 SNORA31.17-201ENST00000516953 127 ntBASIC2.66□□□□□ -1.98
ECM1Q16610 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
ECM1Q16610 MIR4435-1-201ENST00000582552 80 ntBASIC2.66□□□□□ -1.98
ECM1Q16610 AC002984.1-201ENST00000591692 448 ntBASIC2.66□□□□□ -1.98
ECM1Q16610 AC091932.4-201ENST00000623386 200 ntBASIC2.66□□□□□ -1.98
ECM1Q16610 AC010297.1-201ENST00000623948 149 ntBASIC2.66□□□□□ -1.98
ECM1Q16610 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
ECM1Q16610 RNU6-633P-201ENST00000362612 103 ntBASIC2.65□□□□□ -1.99
ECM1Q16610 RNU6-509P-201ENST00000363519 107 ntBASIC2.65□□□□□ -1.99
ECM1Q16610 SNORD45B-201ENST00000364617 72 ntBASIC2.65□□□□□ -1.99
ECM1Q16610 DEFA7P-201ENST00000382676 285 ntBASIC2.65□□□□□ -1.99
ECM1Q16610 Y_RNA.565-201ENST00000384719 101 ntBASIC2.65□□□□□ -1.99
ECM1Q16610 SNX2P2-201ENST00000424553 323 ntBASIC2.65□□□□□ -1.99
ECM1Q16610 RNU6-998P-201ENST00000515894 101 ntBASIC2.65□□□□□ -1.99
ECM1Q16610 AC090821.2-201ENST00000523552 176 ntBASIC2.65□□□□□ -1.99
ECM1Q16610 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
ECM1Q16610 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
ECM1Q16610 AL442644.1-201ENST00000454390 3105 ntBASIC2.64□□□□□ -1.99
ECM1Q16610 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
ECM1Q16610 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
ECM1Q16610 MIR6073-201ENST00000352083 89 ntBASIC2.64□□□□□ -1.99
ECM1Q16610 Y_RNA.191-201ENST00000363972 113 ntBASIC2.64□□□□□ -1.99
ECM1Q16610 SNORD114-30-201ENST00000364448 72 ntBASIC2.64□□□□□ -1.99
ECM1Q16610 RNA5SP508-201ENST00000411327 119 ntBASIC2.64□□□□□ -1.99
ECM1Q16610 AC093850.1-201ENST00000454121 251 ntBASIC2.64□□□□□ -1.99
ECM1Q16610 RNU7-67P-201ENST00000459003 62 ntBASIC2.64□□□□□ -1.99
ECM1Q16610 RNU7-181P-201ENST00000517234 74 ntBASIC2.64□□□□□ -1.99
ECM1Q16610 MIR3670-2-201ENST00000582974 65 ntBASIC2.64□□□□□ -1.99
ECM1Q16610 MIR3670-1-201ENST00000584160 65 ntBASIC2.64□□□□□ -1.99
ECM1Q16610 MIR3670-3-201ENST00000584855 65 ntBASIC2.64□□□□□ -1.99
ECM1Q16610 MIR3670-4-201ENST00000612260 65 ntBASIC2.64□□□□□ -1.99
ECM1Q16610 AC064859.1-201ENST00000624741 174 ntBASIC2.64□□□□□ -1.99
ECM1Q16610 RNU6-1201P-201ENST00000384227 107 ntBASIC2.63□□□□□ -1.99
ECM1Q16610 AL512326.2-201ENST00000426359 151 ntBASIC2.63□□□□□ -1.99
ECM1Q16610 AC004812.1-201ENST00000540773 146 ntBASIC2.63□□□□□ -1.99
ECM1Q16610 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.63□□□□□ -1.99
ECM1Q16610 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
ECM1Q16610 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
ECM1Q16610 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ECM1Q16610 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.62□□□□□ -1.99
ECM1Q16610 SNORD116-10-201ENST00000363791 102 ntBASIC2.62□□□□□ -1.99
ECM1Q16610 RNU4-69P-201ENST00000410677 143 ntBASIC2.62□□□□□ -1.99
ECM1Q16610 RNA5SP144-201ENST00000410846 116 ntBASIC2.62□□□□□ -1.99
ECM1Q16610 AC099513.1-201ENST00000490423 301 ntBASIC2.62□□□□□ -1.99
ECM1Q16610 MIR5007-201ENST00000583098 95 ntBASIC2.62□□□□□ -1.99
ECM1Q16610 MIR4712-201ENST00000583750 82 ntBASIC2.62□□□□□ -1.99
ECM1Q16610 FAM106DP-201ENST00000586416 501 ntBASIC2.62□□□□□ -1.99
ECM1Q16610 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
ECM1Q16610 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
ECM1Q16610 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ECM1Q16610 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
ECM1Q16610 Y_RNA.430-201ENST00000384081 110 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 244.8 ms