Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 Y_RNA.494-201ENST00000384432 111 ntBASIC1.25□□□□□ -2.21
LMO4P61968 MIR1263-201ENST00000408324 86 ntBASIC1.25□□□□□ -2.21
LMO4P61968 AC015922.2-201ENST00000435593 184 ntBASIC1.25□□□□□ -2.21
LMO4P61968 AC087499.4-201ENST00000448505 178 ntBASIC1.25□□□□□ -2.21
LMO4P61968 AC093850.1-201ENST00000454121 251 ntBASIC1.25□□□□□ -2.21
LMO4P61968 RPS26P48-201ENST00000491713 339 ntBASIC1.25□□□□□ -2.21
LMO4P61968 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.25□□□□□ -2.21
LMO4P61968 RNU7-12P-201ENST00000516030 62 ntBASIC1.25□□□□□ -2.21
LMO4P61968 RNU6-240P-201ENST00000516098 97 ntBASIC1.25□□□□□ -2.21
LMO4P61968 RNU6-830P-201ENST00000516353 107 ntBASIC1.25□□□□□ -2.21
LMO4P61968 RNU6-589P-201ENST00000516485 107 ntBASIC1.25□□□□□ -2.21
LMO4P61968 Y_RNA.709-201ENST00000516952 92 ntBASIC1.25□□□□□ -2.21
LMO4P61968 SNORA31.24-201ENST00000517232 57 ntBASIC1.25□□□□□ -2.21
LMO4P61968 AL137067.1-201ENST00000615933 120 ntBASIC1.25□□□□□ -2.21
LMO4P61968 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.25□□□□□ -2.21
LMO4P61968 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.25□□□□□ -2.21
LMO4P61968 MTND5P18-201ENST00000445624 1801 ntBASIC1.24□□□□□ -2.21
LMO4P61968 Y_RNA.35-201ENST00000362601 101 ntBASIC1.24□□□□□ -2.21
LMO4P61968 RNU6-153P-201ENST00000364422 104 ntBASIC1.24□□□□□ -2.21
LMO4P61968 Y_RNA.346-201ENST00000365385 112 ntBASIC1.24□□□□□ -2.21
LMO4P61968 MIR516B2-201ENST00000385190 85 ntBASIC1.24□□□□□ -2.21
LMO4P61968 MIR548A3-201ENST00000385297 97 ntBASIC1.24□□□□□ -2.21
LMO4P61968 AC009474.2-201ENST00000451383 136 ntBASIC1.24□□□□□ -2.21
LMO4P61968 TRMT112P2-201ENST00000512910 132 ntBASIC1.24□□□□□ -2.21
LMO4P61968 SNORA18.7-201ENST00000516910 131 ntBASIC1.24□□□□□ -2.21
LMO4P61968 AL121890.5-201ENST00000620848 304 ntBASIC1.24□□□□□ -2.21
LMO4P61968 AL513423.1-201ENST00000621695 132 ntBASIC1.24□□□□□ -2.21
LMO4P61968 ZNF209P-201ENST00000593450 2304 ntBASIC1.24□□□□□ -2.21
LMO4P61968 RNU6-349P-201ENST00000362402 107 ntBASIC1.23□□□□□ -2.21
LMO4P61968 Y_RNA.241-201ENST00000364470 117 ntBASIC1.23□□□□□ -2.21
LMO4P61968 RNU6-690P-201ENST00000365242 106 ntBASIC1.23□□□□□ -2.21
LMO4P61968 Y_RNA.351-201ENST00000365436 96 ntBASIC1.23□□□□□ -2.21
LMO4P61968 SNORD116-21-201ENST00000384507 92 ntBASIC1.23□□□□□ -2.21
LMO4P61968 MIR660-201ENST00000385235 97 ntBASIC1.23□□□□□ -2.21
LMO4P61968 PGBD4P5-201ENST00000445958 426 ntBASIC1.23□□□□□ -2.21
LMO4P61968 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.23□□□□□ -2.21
LMO4P61968 SNORA31.4-201ENST00000516049 129 ntBASIC1.23□□□□□ -2.21
LMO4P61968 RNU7-70P-201ENST00000516941 66 ntBASIC1.23□□□□□ -2.21
LMO4P61968 RNU7-181P-201ENST00000517234 74 ntBASIC1.23□□□□□ -2.21
LMO4P61968 AC090821.2-201ENST00000523552 176 ntBASIC1.23□□□□□ -2.21
LMO4P61968 MIR4778-201ENST00000577635 80 ntBASIC1.23□□□□□ -2.21
LMO4P61968 AC091932.4-201ENST00000623386 200 ntBASIC1.23□□□□□ -2.21
LMO4P61968 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.23□□□□□ -2.21
LMO4P61968 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.22□□□□□ -2.21
LMO4P61968 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
LMO4P61968 SNORD115-34-201ENST00000362441 82 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORD115-12-201ENST00000362583 82 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORD115-29-201ENST00000362834 82 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORD115-9-201ENST00000362912 82 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORD115-21-201ENST00000362963 81 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORD115-14-201ENST00000363090 81 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORD115-13-201ENST00000363358 82 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORD115-41-201ENST00000363608 82 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORD115-11-201ENST00000363616 82 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORD115-5-201ENST00000363633 82 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORD115-39-201ENST00000363694 82 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORA7.1-201ENST00000363750 139 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORD115-4-201ENST00000363810 82 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORD115-16-201ENST00000363887 82 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORD115-6-201ENST00000363942 82 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORD115-42-201ENST00000364273 82 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORD115-15-201ENST00000364809 81 ntBASIC1.22□□□□□ -2.21
LMO4P61968 RNU1-133P-201ENST00000364867 167 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORD115-1-201ENST00000364961 82 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORD115-26-201ENST00000365067 82 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORD115-10-201ENST00000365073 81 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORD115-43-201ENST00000365503 82 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORD115-36-201ENST00000365629 82 ntBASIC1.22□□□□□ -2.21
LMO4P61968 RNY1P6-201ENST00000384193 109 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORA27-201ENST00000384323 126 ntBASIC1.22□□□□□ -2.21
LMO4P61968 Y_RNA.528-201ENST00000384575 108 ntBASIC1.22□□□□□ -2.21
LMO4P61968 MIR526A1-201ENST00000384897 85 ntBASIC1.22□□□□□ -2.21
LMO4P61968 MIR452-201ENST00000385020 85 ntBASIC1.22□□□□□ -2.21
LMO4P61968 MIR548A1-201ENST00000385041 97 ntBASIC1.22□□□□□ -2.21
LMO4P61968 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.22□□□□□ -2.21
LMO4P61968 U8.17-201ENST00000391292 132 ntBASIC1.22□□□□□ -2.21
LMO4P61968 MIR1304-201ENST00000408243 91 ntBASIC1.22□□□□□ -2.21
LMO4P61968 AC004965.1-201ENST00000413033 213 ntBASIC1.22□□□□□ -2.21
LMO4P61968 AC063976.4-201ENST00000421971 163 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNX2P2-201ENST00000424553 323 ntBASIC1.22□□□□□ -2.21
LMO4P61968 AL354695.1-201ENST00000427935 228 ntBASIC1.22□□□□□ -2.21
LMO4P61968 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.22□□□□□ -2.21
LMO4P61968 Y_RNA.649-201ENST00000459077 103 ntBASIC1.22□□□□□ -2.21
LMO4P61968 RNU6-970P-201ENST00000516312 107 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORA77B-201ENST00000578179 125 ntBASIC1.22□□□□□ -2.21
LMO4P61968 HSPE1P19-201ENST00000603327 295 ntBASIC1.22□□□□□ -2.21
LMO4P61968 SNORD115-40-201ENST00000606510 82 ntBASIC1.22□□□□□ -2.21
LMO4P61968 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.22□□□□□ -2.21
LMO4P61968 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
LMO4P61968 AL596211.1-201ENST00000569873 2277 ntBASIC1.21□□□□□ -2.22
LMO4P61968 MIR342-201ENST00000362212 99 ntBASIC1.21□□□□□ -2.22
LMO4P61968 MIR337-201ENST00000362281 93 ntBASIC1.21□□□□□ -2.22
LMO4P61968 RNY1P10-201ENST00000363268 113 ntBASIC1.21□□□□□ -2.22
LMO4P61968 RNU4-16P-201ENST00000364737 141 ntBASIC1.21□□□□□ -2.22
LMO4P61968 RNU6-880P-201ENST00000384526 107 ntBASIC1.21□□□□□ -2.22
LMO4P61968 RNA5SP136-201ENST00000410906 107 ntBASIC1.21□□□□□ -2.22
LMO4P61968 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.21□□□□□ -2.22
LMO4P61968 RNU7-80P-201ENST00000459562 61 ntBASIC1.21□□□□□ -2.22
LMO4P61968 PDCD5P2-201ENST00000507570 312 ntBASIC1.21□□□□□ -2.22
LMO4P61968 RNU6-998P-201ENST00000515894 101 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 229.1 ms