Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.35□□□□□ -2.63
GTF2A1P52655 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.35□□□□□ -2.63
GTF2A1P52655 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.35□□□□□ -2.63
GTF2A1P52655 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.35□□□□□ -2.63
GTF2A1P52655 MIR1244-1-201ENST00000612829 85 ntBASIC-1.35□□□□□ -2.63
GTF2A1P52655 AC069503.3-201ENST00000618674 145 ntBASIC-1.35□□□□□ -2.63
GTF2A1P52655 MIR1244-3-201ENST00000635744 85 ntBASIC-1.35□□□□□ -2.63
GTF2A1P52655 MIR1244-2-201ENST00000636449 85 ntBASIC-1.35□□□□□ -2.63
GTF2A1P52655 MIR1244-4-202ENST00000636813 85 ntBASIC-1.35□□□□□ -2.63
GTF2A1P52655 MIR6086-201ENST00000638065 55 ntBASIC-1.35□□□□□ -2.63
GTF2A1P52655 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.35□□□□□ -2.63
GTF2A1P52655 RNY1P2-201ENST00000364820 117 ntBASIC-1.36□□□□□ -2.63
GTF2A1P52655 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.36□□□□□ -2.63
GTF2A1P52655 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.36□□□□□ -2.63
GTF2A1P52655 AL365203.2-201ENST00000423444 196 ntBASIC-1.36□□□□□ -2.63
GTF2A1P52655 AC024067.1-201ENST00000426199 223 ntBASIC-1.36□□□□□ -2.63
GTF2A1P52655 RNU7-74P-201ENST00000459104 62 ntBASIC-1.36□□□□□ -2.63
GTF2A1P52655 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.36□□□□□ -2.63
GTF2A1P52655 SNORD77.4-201ENST00000516158 81 ntBASIC-1.36□□□□□ -2.63
GTF2A1P52655 MTND3P12-201ENST00000559068 328 ntBASIC-1.36□□□□□ -2.63
GTF2A1P52655 MIR378F-201ENST00000578143 78 ntBASIC-1.36□□□□□ -2.63
GTF2A1P52655 MIR4662B-201ENST00000579498 81 ntBASIC-1.36□□□□□ -2.63
GTF2A1P52655 MIR548AE1-201ENST00000583292 70 ntBASIC-1.36□□□□□ -2.63
GTF2A1P52655 AL049861.1-201ENST00000603130 150 ntBASIC-1.36□□□□□ -2.63
GTF2A1P52655 AC011476.5-201ENST00000615594 130 ntBASIC-1.36□□□□□ -2.63
GTF2A1P52655 SNORA22.1-201ENST00000362701 134 ntBASIC-1.37□□□□□ -2.63
GTF2A1P52655 SNORD81.1-201ENST00000363064 77 ntBASIC-1.37□□□□□ -2.63
GTF2A1P52655 SNORD115-44-201ENST00000365391 82 ntBASIC-1.37□□□□□ -2.63
GTF2A1P52655 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.37□□□□□ -2.63
GTF2A1P52655 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.37□□□□□ -2.63
GTF2A1P52655 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.37□□□□□ -2.63
GTF2A1P52655 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.37□□□□□ -2.63
GTF2A1P52655 RNA5SP470-201ENST00000516463 106 ntBASIC-1.37□□□□□ -2.63
GTF2A1P52655 MIR4324-201ENST00000584846 72 ntBASIC-1.37□□□□□ -2.63
GTF2A1P52655 AC092794.2-201ENST00000620933 563 ntBASIC-1.37□□□□□ -2.63
GTF2A1P52655 MTND5P18-201ENST00000445624 1801 ntBASIC-1.38□□□□□ -2.63
GTF2A1P52655 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.38□□□□□ -2.63
GTF2A1P52655 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.38□□□□□ -2.63
GTF2A1P52655 RNY3P5-201ENST00000384127 102 ntBASIC-1.38□□□□□ -2.63
GTF2A1P52655 AC097635.1-201ENST00000450678 155 ntBASIC-1.38□□□□□ -2.63
GTF2A1P52655 AP000676.1-201ENST00000533307 52 ntBASIC-1.38□□□□□ -2.63
GTF2A1P52655 YWHAEP2-201ENST00000580066 112 ntBASIC-1.38□□□□□ -2.63
GTF2A1P52655 MIR6738-201ENST00000619620 64 ntBASIC-1.38□□□□□ -2.63
GTF2A1P52655 Z69908.1-201ENST00000622603 247 ntBASIC-1.38□□□□□ -2.63
GTF2A1P52655 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 RNU6-154P-201ENST00000384306 106 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 RNY3P4-201ENST00000384428 101 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 RNU6-24P-201ENST00000384440 107 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 SNORD78.2-201ENST00000391076 69 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 SEPT14P3-201ENST00000439401 183 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 AL732372.2-207ENST00000445840 183 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 SEPT14P2-201ENST00000453405 183 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 MIR2053-201ENST00000459295 91 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 SEPT14P4-201ENST00000513445 186 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 RNU7-79P-201ENST00000516082 62 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 RNU6-864P-201ENST00000516256 108 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 RNU6-1088P-201ENST00000516850 104 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 RNU6-273P-201ENST00000516937 96 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 FO082796.1-201ENST00000523795 183 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 MTND5P40-201ENST00000559945 246 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 MIR3179-1-201ENST00000578940 84 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 MIR3179-2-201ENST00000579107 84 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 MIR3179-3-201ENST00000579566 84 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 RNU7-10P-201ENST00000607194 63 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 MIR3179-4-201ENST00000617599 84 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 MIR3662-201ENST00000637030 95 ntBASIC-1.39□□□□□ -2.63
GTF2A1P52655 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.4□□□□□ -2.63
GTF2A1P52655 RNU6-1085P-201ENST00000363576 107 ntBASIC-1.4□□□□□ -2.63
GTF2A1P52655 RNU6-801P-201ENST00000364087 105 ntBASIC-1.4□□□□□ -2.63
GTF2A1P52655 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.4□□□□□ -2.63
GTF2A1P52655 RNU6-30P-201ENST00000384561 107 ntBASIC-1.4□□□□□ -2.63
GTF2A1P52655 AC093423.1-201ENST00000440817 142 ntBASIC-1.4□□□□□ -2.63
GTF2A1P52655 snoU13.19-201ENST00000459148 104 ntBASIC-1.4□□□□□ -2.63
GTF2A1P52655 snoU13.11-201ENST00000459219 104 ntBASIC-1.4□□□□□ -2.63
GTF2A1P52655 RN7SKP19-201ENST00000516016 252 ntBASIC-1.4□□□□□ -2.63
GTF2A1P52655 AC100767.1-201ENST00000528178 123 ntBASIC-1.4□□□□□ -2.63
GTF2A1P52655 MIR3145-201ENST00000580727 82 ntBASIC-1.4□□□□□ -2.63
GTF2A1P52655 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.41□□□□□ -2.64
GTF2A1P52655 SNORA75-201ENST00000384158 137 ntBASIC-1.41□□□□□ -2.64
GTF2A1P52655 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.41□□□□□ -2.64
GTF2A1P52655 SNORA20-201ENST00000384662 132 ntBASIC-1.41□□□□□ -2.64
GTF2A1P52655 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.41□□□□□ -2.64
GTF2A1P52655 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.41□□□□□ -2.64
GTF2A1P52655 snoU13.13-201ENST00000458842 104 ntBASIC-1.41□□□□□ -2.64
GTF2A1P52655 RNU7-55P-201ENST00000459426 62 ntBASIC-1.41□□□□□ -2.64
GTF2A1P52655 TRAJ51-201ENST00000504127 63 ntBASIC-1.41□□□□□ -2.64
GTF2A1P52655 RNU7-13P-201ENST00000516413 62 ntBASIC-1.41□□□□□ -2.64
GTF2A1P52655 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.41□□□□□ -2.64
GTF2A1P52655 MIR4659A-201ENST00000580269 81 ntBASIC-1.41□□□□□ -2.64
GTF2A1P52655 AC091932.4-201ENST00000623386 200 ntBASIC-1.41□□□□□ -2.64
GTF2A1P52655 RNU6-308P-201ENST00000390957 107 ntBASIC-1.42□□□□□ -2.64
GTF2A1P52655 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-1.42□□□□□ -2.64
GTF2A1P52655 RNU6-365P-201ENST00000517113 106 ntBASIC-1.42□□□□□ -2.64
GTF2A1P52655 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.42□□□□□ -2.64
GTF2A1P52655 AC140658.3-201ENST00000567603 271 ntBASIC-1.42□□□□□ -2.64
GTF2A1P52655 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.42□□□□□ -2.64
GTF2A1P52655 MIR376A2-201ENST00000636782 80 ntBASIC-1.42□□□□□ -2.64
GTF2A1P52655 AC099654.14-201ENST00000638599 341 ntBASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 256.4 ms