Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 Y_RNA.49-201ENST00000362714 112 ntBASIC2.18□□□□□ -2.06
CCNFP41002 Y_RNA.531-201ENST00000384589 121 ntBASIC2.18□□□□□ -2.06
CCNFP41002 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CCNFP41002 AL451046.2-201ENST00000403074 277 ntBASIC2.18□□□□□ -2.06
CCNFP41002 RNA5SP425-201ENST00000410336 112 ntBASIC2.18□□□□□ -2.06
CCNFP41002 RNA5SP261-201ENST00000410536 106 ntBASIC2.18□□□□□ -2.06
CCNFP41002 POLR2J4-204ENST00000418424 324 ntBASIC2.18□□□□□ -2.06
CCNFP41002 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.18□□□□□ -2.06
CCNFP41002 HMGN1P33-201ENST00000432945 451 ntBASIC2.18□□□□□ -2.06
CCNFP41002 RNU7-43P-201ENST00000516554 64 ntBASIC2.18□□□□□ -2.06
CCNFP41002 DNAJC19P9-201ENST00000555084 351 ntBASIC2.18□□□□□ -2.06
CCNFP41002 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.18□□□□□ -2.06
CCNFP41002 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.18□□□□□ -2.06
CCNFP41002 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.18□□□□□ -2.06
CCNFP41002 Y_RNA.344-201ENST00000365381 112 ntBASIC2.17□□□□□ -2.06
CCNFP41002 MIR548D2-201ENST00000384955 97 ntBASIC2.17□□□□□ -2.06
CCNFP41002 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CCNFP41002 SNORA48.3-201ENST00000391081 134 ntBASIC2.17□□□□□ -2.06
CCNFP41002 AL161935.2-201ENST00000414627 60 ntBASIC2.17□□□□□ -2.06
CCNFP41002 RNU6-893P-201ENST00000458841 100 ntBASIC2.17□□□□□ -2.06
CCNFP41002 snoU13.23-201ENST00000458863 104 ntBASIC2.17□□□□□ -2.06
CCNFP41002 RPL39P34-201ENST00000477141 156 ntBASIC2.17□□□□□ -2.06
CCNFP41002 RNU6-922P-201ENST00000516753 99 ntBASIC2.17□□□□□ -2.06
CCNFP41002 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.17□□□□□ -2.06
CCNFP41002 AC008133.2-201ENST00000624540 351 ntBASIC2.17□□□□□ -2.06
CCNFP41002 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCNFP41002 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCNFP41002 SNORA24-201ENST00000384096 131 ntBASIC2.16□□□□□ -2.06
CCNFP41002 MIR221-201ENST00000385135 110 ntBASIC2.16□□□□□ -2.06
CCNFP41002 MIR1302-5-201ENST00000408164 150 ntBASIC2.16□□□□□ -2.06
CCNFP41002 RNU6-554P-201ENST00000410466 106 ntBASIC2.16□□□□□ -2.06
CCNFP41002 RNU7-73P-201ENST00000458743 63 ntBASIC2.16□□□□□ -2.06
CCNFP41002 RNA5SP33-201ENST00000516687 98 ntBASIC2.16□□□□□ -2.06
CCNFP41002 RNU6-1258P-201ENST00000516911 111 ntBASIC2.16□□□□□ -2.06
CCNFP41002 SNORA44.1-201ENST00000517031 108 ntBASIC2.16□□□□□ -2.06
CCNFP41002 MIR4679-2-201ENST00000578358 77 ntBASIC2.16□□□□□ -2.06
CCNFP41002 AL020996.3-201ENST00000606617 222 ntBASIC2.16□□□□□ -2.06
CCNFP41002 AC103810.8-201ENST00000607347 118 ntBASIC2.16□□□□□ -2.06
CCNFP41002 MIR6717-201ENST00000622747 73 ntBASIC2.16□□□□□ -2.06
CCNFP41002 RNU6-1014P-201ENST00000383940 103 ntBASIC2.15□□□□□ -2.07
CCNFP41002 RNU6-106P-201ENST00000384405 107 ntBASIC2.15□□□□□ -2.07
CCNFP41002 SNORA3.2-201ENST00000408221 125 ntBASIC2.15□□□□□ -2.07
CCNFP41002 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.15□□□□□ -2.07
CCNFP41002 AC025033.1-201ENST00000463883 194 ntBASIC2.15□□□□□ -2.07
CCNFP41002 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.15□□□□□ -2.07
CCNFP41002 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CCNFP41002 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CCNFP41002 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CCNFP41002 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CCNFP41002 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CCNFP41002 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCNFP41002 Y_RNA.163-201ENST00000363702 113 ntBASIC2.14□□□□□ -2.07
CCNFP41002 SNORA1.1-201ENST00000364671 133 ntBASIC2.14□□□□□ -2.07
CCNFP41002 RNA5SP160-201ENST00000364866 120 ntBASIC2.14□□□□□ -2.07
CCNFP41002 SNORA26.6-201ENST00000391256 115 ntBASIC2.14□□□□□ -2.07
CCNFP41002 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.14□□□□□ -2.07
CCNFP41002 RPL39P25-201ENST00000449384 154 ntBASIC2.14□□□□□ -2.07
CCNFP41002 snoU13.16-201ENST00000459350 104 ntBASIC2.14□□□□□ -2.07
CCNFP41002 RNU6-168P-201ENST00000516189 101 ntBASIC2.14□□□□□ -2.07
CCNFP41002 SNORA77B-201ENST00000578179 125 ntBASIC2.14□□□□□ -2.07
CCNFP41002 MIR6873-201ENST00000622788 63 ntBASIC2.14□□□□□ -2.07
CCNFP41002 RNA5SP89-201ENST00000410300 108 ntBASIC2.13□□□□□ -2.07
CCNFP41002 RPS3AP1-201ENST00000413190 320 ntBASIC2.13□□□□□ -2.07
CCNFP41002 RPS23P4-201ENST00000487908 423 ntBASIC2.13□□□□□ -2.07
CCNFP41002 AC068339.1-201ENST00000526965 141 ntBASIC2.13□□□□□ -2.07
CCNFP41002 AL096840.1-201ENST00000603287 93 ntBASIC2.13□□□□□ -2.07
CCNFP41002 uc_338.20-201ENST00000621563 178 ntBASIC2.13□□□□□ -2.07
CCNFP41002 MIR8063-201ENST00000621930 81 ntBASIC2.13□□□□□ -2.07
CCNFP41002 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CCNFP41002 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CCNFP41002 U8.6-201ENST00000364939 135 ntBASIC2.12□□□□□ -2.07
CCNFP41002 RNU6-32P-201ENST00000383948 107 ntBASIC2.12□□□□□ -2.07
CCNFP41002 RNU6-756P-201ENST00000383997 107 ntBASIC2.12□□□□□ -2.07
CCNFP41002 SNORA32-201ENST00000384072 121 ntBASIC2.12□□□□□ -2.07
CCNFP41002 SNORA51.5-201ENST00000384126 131 ntBASIC2.12□□□□□ -2.07
CCNFP41002 RNU6-13P-201ENST00000384248 107 ntBASIC2.12□□□□□ -2.07
CCNFP41002 Y_RNA.470-201ENST00000384307 117 ntBASIC2.12□□□□□ -2.07
CCNFP41002 RNU6-12P-201ENST00000384604 107 ntBASIC2.12□□□□□ -2.07
CCNFP41002 RNU6-41P-201ENST00000384741 107 ntBASIC2.12□□□□□ -2.07
CCNFP41002 RNU6-482P-201ENST00000391068 107 ntBASIC2.12□□□□□ -2.07
CCNFP41002 RPL23AP42-201ENST00000471152 471 ntBASIC2.12□□□□□ -2.07
CCNFP41002 RNU7-41P-201ENST00000515917 61 ntBASIC2.12□□□□□ -2.07
CCNFP41002 RNU6-947P-201ENST00000516264 106 ntBASIC2.12□□□□□ -2.07
CCNFP41002 MIR514B-201ENST00000516774 80 ntBASIC2.12□□□□□ -2.07
CCNFP41002 RNA5SP364-201ENST00000516938 78 ntBASIC2.12□□□□□ -2.07
CCNFP41002 MIR1273D-201ENST00000577266 86 ntBASIC2.12□□□□□ -2.07
CCNFP41002 MIR4648-201ENST00000580107 72 ntBASIC2.12□□□□□ -2.07
CCNFP41002 MIR4251-201ENST00000635819 61 ntBASIC2.12□□□□□ -2.07
CCNFP41002 Y_RNA.309-201ENST00000365046 111 ntBASIC2.11□□□□□ -2.07
CCNFP41002 Y_RNA.495-201ENST00000384435 112 ntBASIC2.11□□□□□ -2.07
CCNFP41002 MIR30A-201ENST00000385092 71 ntBASIC2.11□□□□□ -2.07
CCNFP41002 MIR653-201ENST00000385279 96 ntBASIC2.11□□□□□ -2.07
CCNFP41002 RNU6-816P-201ENST00000390914 107 ntBASIC2.11□□□□□ -2.07
CCNFP41002 RNU6-1268P-201ENST00000391214 107 ntBASIC2.11□□□□□ -2.07
CCNFP41002 RNU6-1239P-201ENST00000391310 107 ntBASIC2.11□□□□□ -2.07
CCNFP41002 HMGN2P19-201ENST00000425149 265 ntBASIC2.11□□□□□ -2.07
CCNFP41002 AC113410.1-201ENST00000505029 247 ntBASIC2.11□□□□□ -2.07
CCNFP41002 SNORD111.1-201ENST00000516421 86 ntBASIC2.11□□□□□ -2.07
CCNFP41002 MIR5009-201ENST00000578736 100 ntBASIC2.11□□□□□ -2.07
CCNFP41002 MIR548AE2-201ENST00000583456 67 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 186.5 ms