Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RXRBP28702 ICE2P2-201ENST00000483823 2787 ntBASIC2.74□□□□□ -1.97
RXRBP28702 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RXRBP28702 RNU6-170P-201ENST00000362832 104 ntBASIC2.74□□□□□ -1.97
RXRBP28702 RNA5SP225-201ENST00000410874 135 ntBASIC2.74□□□□□ -1.97
RXRBP28702 AC004941.2-201ENST00000427009 228 ntBASIC2.74□□□□□ -1.97
RXRBP28702 MIR1270-201ENST00000459320 83 ntBASIC2.74□□□□□ -1.97
RXRBP28702 SNORA31.10-201ENST00000516482 106 ntBASIC2.74□□□□□ -1.97
RXRBP28702 U7.3-201ENST00000616123 62 ntBASIC2.74□□□□□ -1.97
RXRBP28702 MIR8054-201ENST00000620877 86 ntBASIC2.74□□□□□ -1.97
RXRBP28702 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.74□□□□□ -1.97
RXRBP28702 AC021613.1-201ENST00000623880 111 ntBASIC2.74□□□□□ -1.97
RXRBP28702 AC091304.10-201ENST00000641554 121 ntBASIC2.74□□□□□ -1.97
RXRBP28702 AC080100.1-201ENST00000624239 5356 ntBASIC2.73□□□□□ -1.97
RXRBP28702 MIR21-201ENST00000362134 72 ntBASIC2.73□□□□□ -1.97
RXRBP28702 Y_RNA.507-201ENST00000384500 99 ntBASIC2.73□□□□□ -1.97
RXRBP28702 AC022254.1-201ENST00000567857 235 ntBASIC2.73□□□□□ -1.97
RXRBP28702 MIR203B-201ENST00000636080 86 ntBASIC2.73□□□□□ -1.97
RXRBP28702 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RXRBP28702 Y_RNA.241-201ENST00000364470 117 ntBASIC2.72□□□□□ -1.97
RXRBP28702 RNU4-67P-201ENST00000364569 141 ntBASIC2.72□□□□□ -1.97
RXRBP28702 Y_RNA.327-201ENST00000365201 102 ntBASIC2.72□□□□□ -1.97
RXRBP28702 RNU6-1124P-201ENST00000384169 107 ntBASIC2.72□□□□□ -1.97
RXRBP28702 RNU6-679P-201ENST00000391003 106 ntBASIC2.72□□□□□ -1.97
RXRBP28702 SNORA48.3-201ENST00000391081 134 ntBASIC2.72□□□□□ -1.97
RXRBP28702 RNU6-733P-201ENST00000410759 104 ntBASIC2.72□□□□□ -1.97
RXRBP28702 RNU7-96P-201ENST00000459535 64 ntBASIC2.72□□□□□ -1.97
RXRBP28702 AC022137.1-201ENST00000483735 151 ntBASIC2.72□□□□□ -1.97
RXRBP28702 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.72□□□□□ -1.97
RXRBP28702 RNU6-162P-201ENST00000516228 103 ntBASIC2.72□□□□□ -1.97
RXRBP28702 RNA5SP402-201ENST00000517148 110 ntBASIC2.72□□□□□ -1.97
RXRBP28702 AC090821.2-201ENST00000523552 176 ntBASIC2.72□□□□□ -1.97
RXRBP28702 MIR4303-201ENST00000581299 66 ntBASIC2.72□□□□□ -1.97
RXRBP28702 MIR4777-201ENST00000583710 86 ntBASIC2.72□□□□□ -1.97
RXRBP28702 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RXRBP28702 SNORD115-34-201ENST00000362441 82 ntBASIC2.71□□□□□ -1.98
RXRBP28702 SNORD115-12-201ENST00000362583 82 ntBASIC2.71□□□□□ -1.98
RXRBP28702 SNORD115-29-201ENST00000362834 82 ntBASIC2.71□□□□□ -1.98
RXRBP28702 SNORD115-9-201ENST00000362912 82 ntBASIC2.71□□□□□ -1.98
RXRBP28702 SNORD115-21-201ENST00000362963 81 ntBASIC2.71□□□□□ -1.98
RXRBP28702 SNORD115-14-201ENST00000363090 81 ntBASIC2.71□□□□□ -1.98
RXRBP28702 SNORD115-13-201ENST00000363358 82 ntBASIC2.71□□□□□ -1.98
RXRBP28702 SNORD115-41-201ENST00000363608 82 ntBASIC2.71□□□□□ -1.98
RXRBP28702 SNORD115-11-201ENST00000363616 82 ntBASIC2.71□□□□□ -1.98
RXRBP28702 SNORD115-5-201ENST00000363633 82 ntBASIC2.71□□□□□ -1.98
RXRBP28702 SNORD115-39-201ENST00000363694 82 ntBASIC2.71□□□□□ -1.98
RXRBP28702 Y_RNA.171-201ENST00000363760 102 ntBASIC2.71□□□□□ -1.98
RXRBP28702 SNORD115-4-201ENST00000363810 82 ntBASIC2.71□□□□□ -1.98
RXRBP28702 SNORD115-16-201ENST00000363887 82 ntBASIC2.71□□□□□ -1.98
RXRBP28702 SNORD115-6-201ENST00000363942 82 ntBASIC2.71□□□□□ -1.98
RXRBP28702 SNORD115-42-201ENST00000364273 82 ntBASIC2.71□□□□□ -1.98
RXRBP28702 SNORD115-15-201ENST00000364809 81 ntBASIC2.71□□□□□ -1.98
RXRBP28702 RNU6-392P-201ENST00000364926 101 ntBASIC2.71□□□□□ -1.98
RXRBP28702 SNORD115-1-201ENST00000364961 82 ntBASIC2.71□□□□□ -1.98
RXRBP28702 SNORD115-26-201ENST00000365067 82 ntBASIC2.71□□□□□ -1.98
RXRBP28702 SNORD115-10-201ENST00000365073 81 ntBASIC2.71□□□□□ -1.98
RXRBP28702 SNORD115-43-201ENST00000365503 82 ntBASIC2.71□□□□□ -1.98
RXRBP28702 SNORD115-36-201ENST00000365629 82 ntBASIC2.71□□□□□ -1.98
RXRBP28702 RNU6-787P-201ENST00000384032 107 ntBASIC2.71□□□□□ -1.98
RXRBP28702 SNORA67.5-201ENST00000391036 107 ntBASIC2.71□□□□□ -1.98
RXRBP28702 AL451046.2-201ENST00000403074 277 ntBASIC2.71□□□□□ -1.98
RXRBP28702 AL022718.1-201ENST00000412004 84 ntBASIC2.71□□□□□ -1.98
RXRBP28702 AL035398.1-201ENST00000430869 322 ntBASIC2.71□□□□□ -1.98
RXRBP28702 STAG3L5P-204ENST00000443759 179 ntBASIC2.71□□□□□ -1.98
RXRBP28702 RNU7-45P-201ENST00000459460 63 ntBASIC2.71□□□□□ -1.98
RXRBP28702 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.71□□□□□ -1.98
RXRBP28702 Y_RNA.73-201ENST00000362910 113 ntBASIC2.7□□□□□ -1.98
RXRBP28702 Y_RNA.155-201ENST00000363632 101 ntBASIC2.7□□□□□ -1.98
RXRBP28702 SNORA4.2-201ENST00000365313 147 ntBASIC2.7□□□□□ -1.98
RXRBP28702 RNU6-675P-201ENST00000384236 104 ntBASIC2.7□□□□□ -1.98
RXRBP28702 SNORD38C-201ENST00000384381 69 ntBASIC2.7□□□□□ -1.98
RXRBP28702 RNU6-972P-201ENST00000391208 107 ntBASIC2.7□□□□□ -1.98
RXRBP28702 RNA5SP181-201ENST00000410246 98 ntBASIC2.7□□□□□ -1.98
RXRBP28702 SUMO1P4-201ENST00000429430 302 ntBASIC2.7□□□□□ -1.98
RXRBP28702 AC015922.2-201ENST00000435593 184 ntBASIC2.7□□□□□ -1.98
RXRBP28702 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.7□□□□□ -1.98
RXRBP28702 RNU7-95P-201ENST00000459222 64 ntBASIC2.7□□□□□ -1.98
RXRBP28702 SNORA31.15-201ENST00000516771 132 ntBASIC2.7□□□□□ -1.98
RXRBP28702 RNU7-181P-201ENST00000517234 74 ntBASIC2.7□□□□□ -1.98
RXRBP28702 AC027279.3-201ENST00000625055 122 ntBASIC2.7□□□□□ -1.98
RXRBP28702 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RXRBP28702 Y_RNA.10-201ENST00000362371 110 ntBASIC2.69□□□□□ -1.98
RXRBP28702 RNU6-409P-201ENST00000384114 104 ntBASIC2.69□□□□□ -1.98
RXRBP28702 MIR1255A-201ENST00000408338 113 ntBASIC2.69□□□□□ -1.98
RXRBP28702 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.69□□□□□ -1.98
RXRBP28702 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.69□□□□□ -1.98
RXRBP28702 RNU2-11P-201ENST00000459191 187 ntBASIC2.69□□□□□ -1.98
RXRBP28702 RNU2-13P-201ENST00000515909 113 ntBASIC2.69□□□□□ -1.98
RXRBP28702 AL049779.4-201ENST00000604500 156 ntBASIC2.69□□□□□ -1.98
RXRBP28702 SNORD115-2-201ENST00000362842 82 ntBASIC2.68□□□□□ -1.98
RXRBP28702 RNU6-60P-201ENST00000364792 103 ntBASIC2.68□□□□□ -1.98
RXRBP28702 SNORD115-20-201ENST00000365099 82 ntBASIC2.68□□□□□ -1.98
RXRBP28702 Y_RNA.470-201ENST00000384307 117 ntBASIC2.68□□□□□ -1.98
RXRBP28702 RNU6-163P-201ENST00000384396 106 ntBASIC2.68□□□□□ -1.98
RXRBP28702 RNU4-69P-201ENST00000410677 143 ntBASIC2.68□□□□□ -1.98
RXRBP28702 HSPE1P9-201ENST00000440046 311 ntBASIC2.68□□□□□ -1.98
RXRBP28702 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.68□□□□□ -1.98
RXRBP28702 AC026271.5-201ENST00000577873 130 ntBASIC2.68□□□□□ -1.98
RXRBP28702 FO624990.1-201ENST00000636373 85 ntBASIC2.68□□□□□ -1.98
RXRBP28702 MIR6841-201ENST00000637129 72 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 251.7 ms