Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CDH3P22223 Y_RNA.83-201ENST00000363005 113 ntBASIC0.93□□□□□ -2.26
CDH3P22223 RNU6-379P-201ENST00000363813 104 ntBASIC0.93□□□□□ -2.26
CDH3P22223 RNU1-93P-201ENST00000364704 169 ntBASIC0.93□□□□□ -2.26
CDH3P22223 Y_RNA.274-201ENST00000364714 101 ntBASIC0.93□□□□□ -2.26
CDH3P22223 RNU6-275P-201ENST00000364910 107 ntBASIC0.93□□□□□ -2.26
CDH3P22223 Y_RNA.412-201ENST00000384001 104 ntBASIC0.93□□□□□ -2.26
CDH3P22223 Y_RNA.440-201ENST00000384120 114 ntBASIC0.93□□□□□ -2.26
CDH3P22223 RNU4-70P-201ENST00000384579 139 ntBASIC0.93□□□□□ -2.26
CDH3P22223 MT-TG-201ENST00000387429 68 ntBASIC0.93□□□□□ -2.26
CDH3P22223 RNU6-913P-201ENST00000390913 95 ntBASIC0.93□□□□□ -2.26
CDH3P22223 RNU6-613P-201ENST00000410412 108 ntBASIC0.93□□□□□ -2.26
CDH3P22223 RNU7-67P-201ENST00000459003 62 ntBASIC0.93□□□□□ -2.26
CDH3P22223 snoU13.16-201ENST00000459350 104 ntBASIC0.93□□□□□ -2.26
CDH3P22223 RNU6-958P-201ENST00000516995 106 ntBASIC0.93□□□□□ -2.26
CDH3P22223 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.93□□□□□ -2.26
CDH3P22223 AC036111.3-201ENST00000526389 112 ntBASIC0.93□□□□□ -2.26
CDH3P22223 AC023827.1-201ENST00000569247 97 ntBASIC0.93□□□□□ -2.26
CDH3P22223 AC131055.1-201ENST00000584626 316 ntBASIC0.93□□□□□ -2.26
CDH3P22223 AL365205.2-201ENST00000594586 68 ntBASIC0.93□□□□□ -2.26
CDH3P22223 AL020996.3-201ENST00000606617 222 ntBASIC0.93□□□□□ -2.26
CDH3P22223 U6.106-201ENST00000636360 105 ntBASIC0.93□□□□□ -2.26
CDH3P22223 RNU6-1189P-201ENST00000383958 107 ntBASIC0.92□□□□□ -2.26
CDH3P22223 Y_RNA.435-201ENST00000384095 112 ntBASIC0.92□□□□□ -2.26
CDH3P22223 Y_RNA.542-201ENST00000384641 111 ntBASIC0.92□□□□□ -2.26
CDH3P22223 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
CDH3P22223 RNA5SP95-201ENST00000410319 137 ntBASIC0.92□□□□□ -2.26
CDH3P22223 AC090844.1-201ENST00000422019 156 ntBASIC0.92□□□□□ -2.26
CDH3P22223 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.92□□□□□ -2.26
CDH3P22223 RNU7-73P-201ENST00000458743 63 ntBASIC0.92□□□□□ -2.26
CDH3P22223 MIR378D2-201ENST00000580636 98 ntBASIC0.92□□□□□ -2.26
CDH3P22223 Z83818.1-201ENST00000603584 150 ntBASIC0.92□□□□□ -2.26
CDH3P22223 AC078938.1-201ENST00000620993 318 ntBASIC0.92□□□□□ -2.26
CDH3P22223 Y_RNA.75-201ENST00000362927 97 ntBASIC0.91□□□□□ -2.26
CDH3P22223 RNU6-396P-201ENST00000365369 105 ntBASIC0.91□□□□□ -2.26
CDH3P22223 RNU6-643P-201ENST00000384018 107 ntBASIC0.91□□□□□ -2.26
CDH3P22223 RNU6-125P-201ENST00000384505 107 ntBASIC0.91□□□□□ -2.26
CDH3P22223 AL138752.1-201ENST00000452964 351 ntBASIC0.91□□□□□ -2.26
CDH3P22223 RNU6-998P-201ENST00000515894 101 ntBASIC0.91□□□□□ -2.26
CDH3P22223 MIR2115-201ENST00000516657 100 ntBASIC0.91□□□□□ -2.26
CDH3P22223 MIR5197-201ENST00000583721 112 ntBASIC0.91□□□□□ -2.26
CDH3P22223 AC141273.2-201ENST00000618989 130 ntBASIC0.91□□□□□ -2.26
CDH3P22223 MIR6767-201ENST00000637302 66 ntBASIC0.91□□□□□ -2.26
CDH3P22223 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
CDH3P22223 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
CDH3P22223 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CDH3P22223 Y_RNA.118-201ENST00000363300 101 ntBASIC0.9□□□□□ -2.27
CDH3P22223 Y_RNA.355-201ENST00000365462 98 ntBASIC0.9□□□□□ -2.27
CDH3P22223 MIR520E-201ENST00000384867 87 ntBASIC0.9□□□□□ -2.27
CDH3P22223 MIR200A-201ENST00000384875 90 ntBASIC0.9□□□□□ -2.27
CDH3P22223 MIR532-201ENST00000385025 91 ntBASIC0.9□□□□□ -2.27
CDH3P22223 MIR613-201ENST00000385248 95 ntBASIC0.9□□□□□ -2.27
CDH3P22223 RNU2-64P-201ENST00000411315 191 ntBASIC0.9□□□□□ -2.27
CDH3P22223 AL035398.1-201ENST00000430869 322 ntBASIC0.9□□□□□ -2.27
CDH3P22223 RNU7-96P-201ENST00000459535 64 ntBASIC0.9□□□□□ -2.27
CDH3P22223 SNORD116-25-201ENST00000516517 92 ntBASIC0.9□□□□□ -2.27
CDH3P22223 RNU6-388P-201ENST00000517012 105 ntBASIC0.9□□□□□ -2.27
CDH3P22223 RNU6-389P-201ENST00000517048 105 ntBASIC0.9□□□□□ -2.27
CDH3P22223 AC211469.2-201ENST00000605461 205 ntBASIC0.9□□□□□ -2.27
CDH3P22223 MIR8055-201ENST00000610739 97 ntBASIC0.9□□□□□ -2.27
CDH3P22223 MIR6857-201ENST00000613267 93 ntBASIC0.9□□□□□ -2.27
CDH3P22223 AC106800.4-201ENST00000614905 153 ntBASIC0.9□□□□□ -2.27
CDH3P22223 RNU6-1020P-201ENST00000363684 107 ntBASIC0.89□□□□□ -2.27
CDH3P22223 SNORD114-24-201ENST00000365029 72 ntBASIC0.89□□□□□ -2.27
CDH3P22223 RNU6-1292P-201ENST00000383856 107 ntBASIC0.89□□□□□ -2.27
CDH3P22223 MT-TN-201ENST00000387400 73 ntBASIC0.89□□□□□ -2.27
CDH3P22223 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.89□□□□□ -2.27
CDH3P22223 HMGN1P33-201ENST00000432945 451 ntBASIC0.89□□□□□ -2.27
CDH3P22223 RNU2-11P-201ENST00000459191 187 ntBASIC0.89□□□□□ -2.27
CDH3P22223 RNU7-53P-201ENST00000516705 60 ntBASIC0.89□□□□□ -2.27
CDH3P22223 AC022559.1-201ENST00000520905 205 ntBASIC0.89□□□□□ -2.27
CDH3P22223 MRPS18CP4-201ENST00000535821 231 ntBASIC0.89□□□□□ -2.27
CDH3P22223 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.88□□□□□ -2.27
CDH3P22223 SNORD113.3-201ENST00000364630 78 ntBASIC0.88□□□□□ -2.27
CDH3P22223 RNU6-1190P-201ENST00000410811 104 ntBASIC0.88□□□□□ -2.27
CDH3P22223 RPS29P1-201ENST00000465274 159 ntBASIC0.88□□□□□ -2.27
CDH3P22223 MIR4653-201ENST00000585107 83 ntBASIC0.88□□□□□ -2.27
CDH3P22223 RNU6-94P-201ENST00000607728 107 ntBASIC0.88□□□□□ -2.27
CDH3P22223 Z97988.1-201ENST00000637697 135 ntBASIC0.88□□□□□ -2.27
CDH3P22223 MIR377-201ENST00000362145 69 ntBASIC0.87□□□□□ -2.27
CDH3P22223 Y_RNA.168-201ENST00000363740 102 ntBASIC0.87□□□□□ -2.27
CDH3P22223 Y_RNA.233-201ENST00000364407 101 ntBASIC0.87□□□□□ -2.27
CDH3P22223 Y_RNA.297-201ENST00000364950 91 ntBASIC0.87□□□□□ -2.27
CDH3P22223 Y_RNA.476-201ENST00000384347 108 ntBASIC0.87□□□□□ -2.27
CDH3P22223 SNORA2B-201ENST00000384583 137 ntBASIC0.87□□□□□ -2.27
CDH3P22223 MIR942-201ENST00000401111 86 ntBASIC0.87□□□□□ -2.27
CDH3P22223 SNORD111-201ENST00000408139 94 ntBASIC0.87□□□□□ -2.27
CDH3P22223 MIR548I3-201ENST00000408378 149 ntBASIC0.87□□□□□ -2.27
CDH3P22223 AC244023.1-201ENST00000426884 112 ntBASIC0.87□□□□□ -2.27
CDH3P22223 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.87□□□□□ -2.27
CDH3P22223 RNU6-1219P-201ENST00000516143 112 ntBASIC0.87□□□□□ -2.27
CDH3P22223 AC242498.1-201ENST00000604134 111 ntBASIC0.87□□□□□ -2.27
CDH3P22223 MIR6734-201ENST00000621166 68 ntBASIC0.87□□□□□ -2.27
CDH3P22223 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CDH3P22223 MIR342-201ENST00000362212 99 ntBASIC0.86□□□□□ -2.27
CDH3P22223 RNU6-580P-201ENST00000365159 107 ntBASIC0.86□□□□□ -2.27
CDH3P22223 Y_RNA.515-201ENST00000384535 112 ntBASIC0.86□□□□□ -2.27
CDH3P22223 Y_RNA.552-201ENST00000384665 112 ntBASIC0.86□□□□□ -2.27
CDH3P22223 MIR146A-201ENST00000385201 99 ntBASIC0.86□□□□□ -2.27
CDH3P22223 RNU6-205P-201ENST00000390858 107 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms