Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 RNU6-295P-201ENST00000516901 104 ntBASIC1.99□□□□□ -2.09
PTPN1P18031 MIR4299-201ENST00000577899 72 ntBASIC1.99□□□□□ -2.09
PTPN1P18031 MIR4305-201ENST00000583252 102 ntBASIC1.99□□□□□ -2.09
PTPN1P18031 AC243994.1-201ENST00000618627 109 ntBASIC1.99□□□□□ -2.09
PTPN1P18031 AC021613.1-201ENST00000623880 111 ntBASIC1.99□□□□□ -2.09
PTPN1P18031 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
PTPN1P18031 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
PTPN1P18031 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PTPN1P18031 RNA5SP99-201ENST00000364020 114 ntBASIC1.98□□□□□ -2.09
PTPN1P18031 RNA5SP259-201ENST00000365541 109 ntBASIC1.98□□□□□ -2.09
PTPN1P18031 MIR570-201ENST00000384917 97 ntBASIC1.98□□□□□ -2.09
PTPN1P18031 RNY4P18-201ENST00000391107 89 ntBASIC1.98□□□□□ -2.09
PTPN1P18031 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.98□□□□□ -2.09
PTPN1P18031 RNU7-123P-201ENST00000515911 60 ntBASIC1.98□□□□□ -2.09
PTPN1P18031 RNU6-322P-201ENST00000516010 103 ntBASIC1.98□□□□□ -2.09
PTPN1P18031 RNU7-43P-201ENST00000516554 64 ntBASIC1.98□□□□□ -2.09
PTPN1P18031 MIR4791-201ENST00000607666 84 ntBASIC1.98□□□□□ -2.09
PTPN1P18031 MIR6845-201ENST00000613182 61 ntBASIC1.98□□□□□ -2.09
PTPN1P18031 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.98□□□□□ -2.09
PTPN1P18031 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.98□□□□□ -2.09
PTPN1P18031 AL391516.1-201ENST00000554380 2449 ntBASIC1.97□□□□□ -2.09
PTPN1P18031 Y_RNA.35-201ENST00000362601 101 ntBASIC1.97□□□□□ -2.09
PTPN1P18031 Y_RNA.198-201ENST00000364013 98 ntBASIC1.97□□□□□ -2.09
PTPN1P18031 Y_RNA.213-201ENST00000364178 111 ntBASIC1.97□□□□□ -2.09
PTPN1P18031 RNU6-880P-201ENST00000384526 107 ntBASIC1.97□□□□□ -2.09
PTPN1P18031 Y_RNA.537-201ENST00000384626 109 ntBASIC1.97□□□□□ -2.09
PTPN1P18031 MIR653-201ENST00000385279 96 ntBASIC1.97□□□□□ -2.09
PTPN1P18031 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.97□□□□□ -2.09
PTPN1P18031 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.97□□□□□ -2.09
PTPN1P18031 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
PTPN1P18031 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
PTPN1P18031 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
PTPN1P18031 SNORA26.9-201ENST00000391322 122 ntBASIC1.96□□□□□ -2.1
PTPN1P18031 RNU7-45P-201ENST00000459460 63 ntBASIC1.96□□□□□ -2.1
PTPN1P18031 RNU2-35P-201ENST00000516446 142 ntBASIC1.96□□□□□ -2.1
PTPN1P18031 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.96□□□□□ -2.1
PTPN1P18031 AL627230.6-201ENST00000611129 280 ntBASIC1.96□□□□□ -2.1
PTPN1P18031 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
PTPN1P18031 SNORA51.10-201ENST00000384418 136 ntBASIC1.95□□□□□ -2.1
PTPN1P18031 MIR759-201ENST00000390224 91 ntBASIC1.95□□□□□ -2.1
PTPN1P18031 AL451046.2-201ENST00000403074 277 ntBASIC1.95□□□□□ -2.1
PTPN1P18031 RNA5SP144-201ENST00000410846 116 ntBASIC1.95□□□□□ -2.1
PTPN1P18031 RNU7-73P-201ENST00000458743 63 ntBASIC1.95□□□□□ -2.1
PTPN1P18031 SNORA77B-201ENST00000578179 125 ntBASIC1.95□□□□□ -2.1
PTPN1P18031 MIR4764-201ENST00000580680 88 ntBASIC1.95□□□□□ -2.1
PTPN1P18031 AL096840.1-201ENST00000603287 93 ntBASIC1.95□□□□□ -2.1
PTPN1P18031 MIR8074-201ENST00000615081 81 ntBASIC1.95□□□□□ -2.1
PTPN1P18031 MIR520C-201ENST00000385005 87 ntBASIC1.94□□□□□ -2.1
PTPN1P18031 MIR9-3-201ENST00000385084 90 ntBASIC1.94□□□□□ -2.1
PTPN1P18031 RNU6-1319P-201ENST00000390855 104 ntBASIC1.94□□□□□ -2.1
PTPN1P18031 RNU6-747P-201ENST00000390928 104 ntBASIC1.94□□□□□ -2.1
PTPN1P18031 RNU6-241P-201ENST00000391148 104 ntBASIC1.94□□□□□ -2.1
PTPN1P18031 SUMO2P12-201ENST00000405924 140 ntBASIC1.94□□□□□ -2.1
PTPN1P18031 RNU6-177P-201ENST00000411257 104 ntBASIC1.94□□□□□ -2.1
PTPN1P18031 AL022718.1-201ENST00000412004 84 ntBASIC1.94□□□□□ -2.1
PTPN1P18031 AC063976.4-201ENST00000421971 163 ntBASIC1.94□□□□□ -2.1
PTPN1P18031 RPS29P11-201ENST00000496507 171 ntBASIC1.94□□□□□ -2.1
PTPN1P18031 RNU6-548P-201ENST00000517083 115 ntBASIC1.94□□□□□ -2.1
PTPN1P18031 DNAJC19P9-201ENST00000555084 351 ntBASIC1.94□□□□□ -2.1
PTPN1P18031 AC007012.1-201ENST00000567192 175 ntBASIC1.94□□□□□ -2.1
PTPN1P18031 MIR3152-201ENST00000579801 74 ntBASIC1.94□□□□□ -2.1
PTPN1P18031 AC012493.3-201ENST00000604494 112 ntBASIC1.94□□□□□ -2.1
PTPN1P18031 AC008133.2-201ENST00000624540 351 ntBASIC1.94□□□□□ -2.1
PTPN1P18031 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
PTPN1P18031 SNORA16.1-201ENST00000364597 132 ntBASIC1.93□□□□□ -2.1
PTPN1P18031 SNORA22-201ENST00000383907 134 ntBASIC1.93□□□□□ -2.1
PTPN1P18031 MIR676-201ENST00000390702 67 ntBASIC1.93□□□□□ -2.1
PTPN1P18031 RNU6-913P-201ENST00000390913 95 ntBASIC1.93□□□□□ -2.1
PTPN1P18031 RNU6-482P-201ENST00000391068 107 ntBASIC1.93□□□□□ -2.1
PTPN1P18031 RNA5SP261-201ENST00000410536 106 ntBASIC1.93□□□□□ -2.1
PTPN1P18031 AC015688.6-201ENST00000577737 104 ntBASIC1.93□□□□□ -2.1
PTPN1P18031 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.93□□□□□ -2.1
PTPN1P18031 AL020996.3-201ENST00000606617 222 ntBASIC1.93□□□□□ -2.1
PTPN1P18031 SNORA63.4-201ENST00000362763 126 ntBASIC1.92□□□□□ -2.1
PTPN1P18031 RNU6-1104P-201ENST00000384723 104 ntBASIC1.92□□□□□ -2.1
PTPN1P18031 POLR2J4-204ENST00000418424 324 ntBASIC1.92□□□□□ -2.1
PTPN1P18031 RNU6-893P-201ENST00000458841 100 ntBASIC1.92□□□□□ -2.1
PTPN1P18031 RN7SL274P-201ENST00000492268 272 ntBASIC1.92□□□□□ -2.1
PTPN1P18031 PDCD5P2-201ENST00000507570 312 ntBASIC1.92□□□□□ -2.1
PTPN1P18031 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.92□□□□□ -2.1
PTPN1P18031 AC022523.2-201ENST00000561045 150 ntBASIC1.92□□□□□ -2.1
PTPN1P18031 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.92□□□□□ -2.1
PTPN1P18031 AL353997.5-201ENST00000618886 171 ntBASIC1.92□□□□□ -2.1
PTPN1P18031 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
PTPN1P18031 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
PTPN1P18031 AP000648.3-201ENST00000623539 4507 ntBASIC1.91□□□□□ -2.1
PTPN1P18031 RNY4P6-201ENST00000363667 96 ntBASIC1.91□□□□□ -2.1
PTPN1P18031 MT-TI-201ENST00000387365 69 ntBASIC1.91□□□□□ -2.1
PTPN1P18031 SNORA26.6-201ENST00000391256 115 ntBASIC1.91□□□□□ -2.1
PTPN1P18031 RNU6-1190P-201ENST00000410811 104 ntBASIC1.91□□□□□ -2.1
PTPN1P18031 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.91□□□□□ -2.1
PTPN1P18031 snoU13.16-201ENST00000459350 104 ntBASIC1.91□□□□□ -2.1
PTPN1P18031 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.91□□□□□ -2.1
PTPN1P18031 AC103810.8-201ENST00000607347 118 ntBASIC1.91□□□□□ -2.1
PTPN1P18031 RNU6-755P-201ENST00000364400 103 ntBASIC1.9□□□□□ -2.11
PTPN1P18031 RNU6-153P-201ENST00000364422 104 ntBASIC1.9□□□□□ -2.11
PTPN1P18031 RNU6-412P-201ENST00000516434 106 ntBASIC1.9□□□□□ -2.11
PTPN1P18031 RNU6-922P-201ENST00000516753 99 ntBASIC1.9□□□□□ -2.11
PTPN1P18031 AC004812.1-201ENST00000540773 146 ntBASIC1.9□□□□□ -2.11
PTPN1P18031 AL513534.2-201ENST00000603836 250 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 1292.5 ms