Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MIR204-201ENST00000385200 110 ntBASIC-1.23□□□□□ -2.61
CXCL1P09341 RNU2-14P-201ENST00000411053 191 ntBASIC-1.23□□□□□ -2.61
CXCL1P09341 SPINT5P-201ENST00000448174 155 ntBASIC-1.23□□□□□ -2.61
CXCL1P09341 MTND3P3-201ENST00000505004 126 ntBASIC-1.23□□□□□ -2.61
CXCL1P09341 MIR548H5-201ENST00000580314 60 ntBASIC-1.23□□□□□ -2.61
CXCL1P09341 AC087588.2-201ENST00000617667 426 ntBASIC-1.23□□□□□ -2.61
CXCL1P09341 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.24□□□□□ -2.61
CXCL1P09341 RNA5SP133-201ENST00000363368 119 ntBASIC-1.24□□□□□ -2.61
CXCL1P09341 MIR9-2-201ENST00000384838 87 ntBASIC-1.24□□□□□ -2.61
CXCL1P09341 RNU6-1050P-201ENST00000410388 107 ntBASIC-1.24□□□□□ -2.61
CXCL1P09341 AF228730.3-201ENST00000436691 102 ntBASIC-1.24□□□□□ -2.61
CXCL1P09341 RNU6-956P-201ENST00000458868 103 ntBASIC-1.24□□□□□ -2.61
CXCL1P09341 RNU7-74P-201ENST00000459104 62 ntBASIC-1.24□□□□□ -2.61
CXCL1P09341 SCARNA17-201ENST00000516183 144 ntBASIC-1.24□□□□□ -2.61
CXCL1P09341 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.24□□□□□ -2.61
CXCL1P09341 RNU6-881P-201ENST00000516813 102 ntBASIC-1.24□□□□□ -2.61
CXCL1P09341 RNU6-273P-201ENST00000516937 96 ntBASIC-1.24□□□□□ -2.61
CXCL1P09341 MIR4659A-201ENST00000580269 81 ntBASIC-1.24□□□□□ -2.61
CXCL1P09341 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.24□□□□□ -2.61
CXCL1P09341 uc_338.10-201ENST00000621872 182 ntBASIC-1.24□□□□□ -2.61
CXCL1P09341 MIR342-201ENST00000362212 99 ntBASIC-1.25□□□□□ -2.61
CXCL1P09341 RNU6-801P-201ENST00000364087 105 ntBASIC-1.25□□□□□ -2.61
CXCL1P09341 RNU4-36P-201ENST00000364294 144 ntBASIC-1.25□□□□□ -2.61
CXCL1P09341 SNORD114-15-201ENST00000364687 72 ntBASIC-1.25□□□□□ -2.61
CXCL1P09341 SNORD114-29-201ENST00000364819 70 ntBASIC-1.25□□□□□ -2.61
CXCL1P09341 SNORA18-201ENST00000384416 132 ntBASIC-1.25□□□□□ -2.61
CXCL1P09341 AC100767.1-201ENST00000528178 123 ntBASIC-1.25□□□□□ -2.61
CXCL1P09341 AP003733.2-201ENST00000529409 171 ntBASIC-1.25□□□□□ -2.61
CXCL1P09341 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.25□□□□□ -2.61
CXCL1P09341 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.25□□□□□ -2.61
CXCL1P09341 RNU7-10P-201ENST00000607194 63 ntBASIC-1.25□□□□□ -2.61
CXCL1P09341 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1.25□□□□□ -2.61
CXCL1P09341 DLEU2_1.2-201ENST00000614667 120 ntBASIC-1.25□□□□□ -2.61
CXCL1P09341 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.26□□□□□ -2.61
CXCL1P09341 RNU6-449P-201ENST00000383914 107 ntBASIC-1.26□□□□□ -2.61
CXCL1P09341 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.26□□□□□ -2.61
CXCL1P09341 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.26□□□□□ -2.61
CXCL1P09341 MTND5P5-201ENST00000503764 376 ntBASIC-1.26□□□□□ -2.61
CXCL1P09341 RNU6-307P-201ENST00000516743 106 ntBASIC-1.26□□□□□ -2.61
CXCL1P09341 RNU6-365P-201ENST00000517113 106 ntBASIC-1.26□□□□□ -2.61
CXCL1P09341 AL049861.1-201ENST00000603130 150 ntBASIC-1.26□□□□□ -2.61
CXCL1P09341 AC011476.5-201ENST00000615594 130 ntBASIC-1.26□□□□□ -2.61
CXCL1P09341 AC124864.2-201ENST00000624736 186 ntBASIC-1.26□□□□□ -2.61
CXCL1P09341 AC099654.14-201ENST00000638599 341 ntBASIC-1.26□□□□□ -2.61
CXCL1P09341 RNU6-899P-201ENST00000363947 107 ntBASIC-1.27□□□□□ -2.61
CXCL1P09341 RNU1-141P-201ENST00000364623 158 ntBASIC-1.27□□□□□ -2.61
CXCL1P09341 RNU6-483P-201ENST00000384088 108 ntBASIC-1.27□□□□□ -2.61
CXCL1P09341 RNU6-831P-201ENST00000384548 107 ntBASIC-1.27□□□□□ -2.61
CXCL1P09341 SNORA20-201ENST00000384662 132 ntBASIC-1.27□□□□□ -2.61
CXCL1P09341 MTND2P9-201ENST00000422293 931 ntBASIC-1.27□□□□□ -2.61
CXCL1P09341 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-1.27□□□□□ -2.61
CXCL1P09341 RNU7-80P-201ENST00000459562 61 ntBASIC-1.27□□□□□ -2.61
CXCL1P09341 SNORA27.4-201ENST00000516650 95 ntBASIC-1.27□□□□□ -2.61
CXCL1P09341 RNU6-175P-201ENST00000516896 107 ntBASIC-1.27□□□□□ -2.61
CXCL1P09341 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.27□□□□□ -2.61
CXCL1P09341 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.27□□□□□ -2.61
CXCL1P09341 RNU6-502P-201ENST00000362419 108 ntBASIC-1.28□□□□□ -2.61
CXCL1P09341 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.28□□□□□ -2.61
CXCL1P09341 SNORA22.1-201ENST00000362701 134 ntBASIC-1.28□□□□□ -2.61
CXCL1P09341 Y_RNA.77-201ENST00000362962 107 ntBASIC-1.28□□□□□ -2.61
CXCL1P09341 RNU6-99P-201ENST00000364721 107 ntBASIC-1.28□□□□□ -2.61
CXCL1P09341 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.28□□□□□ -2.61
CXCL1P09341 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.28□□□□□ -2.61
CXCL1P09341 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.28□□□□□ -2.61
CXCL1P09341 RNU6-900P-201ENST00000384498 102 ntBASIC-1.28□□□□□ -2.61
CXCL1P09341 RNU6-1156P-201ENST00000410365 100 ntBASIC-1.28□□□□□ -2.61
CXCL1P09341 AC019235.1-201ENST00000503847 207 ntBASIC-1.28□□□□□ -2.61
CXCL1P09341 RNU6-1314P-201ENST00000517139 104 ntBASIC-1.28□□□□□ -2.61
CXCL1P09341 MIR4790-201ENST00000577799 79 ntBASIC-1.28□□□□□ -2.61
CXCL1P09341 MIR3920-201ENST00000581751 86 ntBASIC-1.28□□□□□ -2.61
CXCL1P09341 AC073114.1-201ENST00000612027 490 ntBASIC-1.28□□□□□ -2.61
CXCL1P09341 AC069503.3-201ENST00000618674 145 ntBASIC-1.28□□□□□ -2.61
CXCL1P09341 AC022960.3-201ENST00000619794 441 ntBASIC-1.28□□□□□ -2.61
CXCL1P09341 U6.109-201ENST00000636749 87 ntBASIC-1.28□□□□□ -2.61
CXCL1P09341 TPTEP1-208ENST00000636884 213 ntBASIC-1.28□□□□□ -2.61
CXCL1P09341 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.29□□□□□ -2.62
CXCL1P09341 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.29□□□□□ -2.62
CXCL1P09341 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.29□□□□□ -2.62
CXCL1P09341 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.29□□□□□ -2.62
CXCL1P09341 RNU6-373P-201ENST00000411247 98 ntBASIC-1.29□□□□□ -2.62
CXCL1P09341 AC009161.1-201ENST00000417306 376 ntBASIC-1.29□□□□□ -2.62
CXCL1P09341 MIR4280-201ENST00000582178 76 ntBASIC-1.29□□□□□ -2.62
CXCL1P09341 AC090617.10-201ENST00000624308 134 ntBASIC-1.29□□□□□ -2.62
CXCL1P09341 MTND5P26-201ENST00000426018 1752 ntBASIC-1.29□□□□□ -2.62
CXCL1P09341 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.3□□□□□ -2.62
CXCL1P09341 MIR539-201ENST00000365690 78 ntBASIC-1.3□□□□□ -2.62
CXCL1P09341 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.3□□□□□ -2.62
CXCL1P09341 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.3□□□□□ -2.62
CXCL1P09341 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.3□□□□□ -2.62
CXCL1P09341 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.3□□□□□ -2.62
CXCL1P09341 MIR6851-201ENST00000617060 67 ntBASIC-1.3□□□□□ -2.62
CXCL1P09341 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.31□□□□□ -2.62
CXCL1P09341 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.31□□□□□ -2.62
CXCL1P09341 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.31□□□□□ -2.62
CXCL1P09341 MIR599-201ENST00000385069 95 ntBASIC-1.31□□□□□ -2.62
CXCL1P09341 RNU6-308P-201ENST00000390957 107 ntBASIC-1.31□□□□□ -2.62
CXCL1P09341 AC097635.1-201ENST00000450678 155 ntBASIC-1.31□□□□□ -2.62
CXCL1P09341 RNU7-79P-201ENST00000516082 62 ntBASIC-1.31□□□□□ -2.62
CXCL1P09341 MIR4473-201ENST00000583731 91 ntBASIC-1.31□□□□□ -2.62
CXCL1P09341 RN7SKP299-201ENST00000606679 301 ntBASIC-1.31□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 197.3 ms