Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 MIR4452-201ENST00000583004 71 ntBASIC1.78□□□□□ -2.12
TOP3BO95985 Y_RNA.191-201ENST00000363972 113 ntBASIC1.77□□□□□ -2.13
TOP3BO95985 RNU6-147P-201ENST00000383983 107 ntBASIC1.77□□□□□ -2.13
TOP3BO95985 SNORD38C-201ENST00000384381 69 ntBASIC1.77□□□□□ -2.13
TOP3BO95985 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.77□□□□□ -2.13
TOP3BO95985 SNORA31.17-201ENST00000516953 127 ntBASIC1.77□□□□□ -2.13
TOP3BO95985 MIR3613-201ENST00000579844 87 ntBASIC1.77□□□□□ -2.13
TOP3BO95985 AC027279.3-201ENST00000625055 122 ntBASIC1.77□□□□□ -2.13
TOP3BO95985 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.77□□□□□ -2.13
TOP3BO95985 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
TOP3BO95985 ICE2P2-201ENST00000483823 2787 ntBASIC1.76□□□□□ -2.13
TOP3BO95985 AL442644.1-201ENST00000454390 3105 ntBASIC1.76□□□□□ -2.13
TOP3BO95985 RNU6-349P-201ENST00000362402 107 ntBASIC1.76□□□□□ -2.13
TOP3BO95985 RNU6-690P-201ENST00000365242 106 ntBASIC1.76□□□□□ -2.13
TOP3BO95985 MIR570-201ENST00000384917 97 ntBASIC1.76□□□□□ -2.13
TOP3BO95985 AL034345.1-201ENST00000407768 123 ntBASIC1.76□□□□□ -2.13
TOP3BO95985 AC087499.4-201ENST00000448505 178 ntBASIC1.76□□□□□ -2.13
TOP3BO95985 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.76□□□□□ -2.13
TOP3BO95985 COX6CP6-201ENST00000490840 228 ntBASIC1.76□□□□□ -2.13
TOP3BO95985 SNORA18.7-201ENST00000516910 131 ntBASIC1.76□□□□□ -2.13
TOP3BO95985 AL078603.1-201ENST00000603824 313 ntBASIC1.76□□□□□ -2.13
TOP3BO95985 AL512598.1-201ENST00000610158 273 ntBASIC1.76□□□□□ -2.13
TOP3BO95985 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.75□□□□□ -2.13
TOP3BO95985 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
TOP3BO95985 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
TOP3BO95985 RNU1-133P-201ENST00000364867 167 ntBASIC1.75□□□□□ -2.13
TOP3BO95985 RNU6-392P-201ENST00000364926 101 ntBASIC1.75□□□□□ -2.13
TOP3BO95985 RNA5SP363-201ENST00000365072 115 ntBASIC1.75□□□□□ -2.13
TOP3BO95985 RNU6-424P-201ENST00000384367 105 ntBASIC1.75□□□□□ -2.13
TOP3BO95985 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
TOP3BO95985 SNORA67.5-201ENST00000391036 107 ntBASIC1.75□□□□□ -2.13
TOP3BO95985 U8.16-201ENST00000391279 133 ntBASIC1.75□□□□□ -2.13
TOP3BO95985 RPL31P63-201ENST00000422565 375 ntBASIC1.75□□□□□ -2.13
TOP3BO95985 snoU13.27-201ENST00000459278 104 ntBASIC1.75□□□□□ -2.13
TOP3BO95985 RNU7-34P-201ENST00000459394 64 ntBASIC1.75□□□□□ -2.13
TOP3BO95985 RNU7-70P-201ENST00000516941 66 ntBASIC1.75□□□□□ -2.13
TOP3BO95985 MIR4709-201ENST00000577272 72 ntBASIC1.75□□□□□ -2.13
TOP3BO95985 AC024614.2-201ENST00000577584 372 ntBASIC1.75□□□□□ -2.13
TOP3BO95985 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.75□□□□□ -2.13
TOP3BO95985 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.74□□□□□ -2.13
TOP3BO95985 Y_RNA.281-201ENST00000364774 94 ntBASIC1.74□□□□□ -2.13
TOP3BO95985 Y_RNA.351-201ENST00000365436 96 ntBASIC1.74□□□□□ -2.13
TOP3BO95985 Y_RNA.374-201ENST00000365606 101 ntBASIC1.74□□□□□ -2.13
TOP3BO95985 RNY1P6-201ENST00000384193 109 ntBASIC1.74□□□□□ -2.13
TOP3BO95985 AC015922.2-201ENST00000435593 184 ntBASIC1.74□□□□□ -2.13
TOP3BO95985 RNU6-830P-201ENST00000516353 107 ntBASIC1.74□□□□□ -2.13
TOP3BO95985 RNA5SP168-201ENST00000516642 112 ntBASIC1.74□□□□□ -2.13
TOP3BO95985 RNY4P20-201ENST00000516678 93 ntBASIC1.74□□□□□ -2.13
TOP3BO95985 AC007012.1-201ENST00000567192 175 ntBASIC1.74□□□□□ -2.13
TOP3BO95985 AC022254.1-201ENST00000567857 235 ntBASIC1.74□□□□□ -2.13
TOP3BO95985 MIR4713-201ENST00000582691 75 ntBASIC1.74□□□□□ -2.13
TOP3BO95985 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
TOP3BO95985 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
TOP3BO95985 RNU6-1298P-201ENST00000362456 101 ntBASIC1.73□□□□□ -2.13
TOP3BO95985 RNU6-833P-201ENST00000363486 107 ntBASIC1.73□□□□□ -2.13
TOP3BO95985 RNU6-1031P-201ENST00000384773 107 ntBASIC1.73□□□□□ -2.13
TOP3BO95985 RNU6-360P-201ENST00000390944 104 ntBASIC1.73□□□□□ -2.13
TOP3BO95985 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.73□□□□□ -2.13
TOP3BO95985 RNU7-80P-201ENST00000459562 61 ntBASIC1.73□□□□□ -2.13
TOP3BO95985 RNA5SP102-201ENST00000516865 106 ntBASIC1.73□□□□□ -2.13
TOP3BO95985 MIR4679-2-201ENST00000578358 77 ntBASIC1.73□□□□□ -2.13
TOP3BO95985 AC021443.1-201ENST00000604478 211 ntBASIC1.73□□□□□ -2.13
TOP3BO95985 AL645939.4-201ENST00000604495 135 ntBASIC1.73□□□□□ -2.13
TOP3BO95985 uc_338.28-201ENST00000612082 187 ntBASIC1.73□□□□□ -2.13
TOP3BO95985 AC091932.4-201ENST00000623386 200 ntBASIC1.73□□□□□ -2.13
TOP3BO95985 Y_RNA.198-201ENST00000364013 98 ntBASIC1.72□□□□□ -2.13
TOP3BO95985 SNORD114-22-201ENST00000365423 72 ntBASIC1.72□□□□□ -2.13
TOP3BO95985 Y_RNA.454-201ENST00000384224 113 ntBASIC1.72□□□□□ -2.13
TOP3BO95985 Y_RNA.549-201ENST00000384657 102 ntBASIC1.72□□□□□ -2.13
TOP3BO95985 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.72□□□□□ -2.13
TOP3BO95985 RNU6-412P-201ENST00000516434 106 ntBASIC1.72□□□□□ -2.13
TOP3BO95985 Y_RNA.241-201ENST00000364470 117 ntBASIC1.71□□□□□ -2.14
TOP3BO95985 RNU6-1107P-201ENST00000364817 104 ntBASIC1.71□□□□□ -2.14
TOP3BO95985 Y_RNA.298-201ENST00000364960 107 ntBASIC1.71□□□□□ -2.14
TOP3BO95985 SNORA27-201ENST00000384323 126 ntBASIC1.71□□□□□ -2.14
TOP3BO95985 SNORD12C-201ENST00000386307 89 ntBASIC1.71□□□□□ -2.14
TOP3BO95985 U8.17-201ENST00000391292 132 ntBASIC1.71□□□□□ -2.14
TOP3BO95985 SNX2P2-201ENST00000424553 323 ntBASIC1.71□□□□□ -2.14
TOP3BO95985 AL031737.1-201ENST00000450125 223 ntBASIC1.71□□□□□ -2.14
TOP3BO95985 RNU7-12P-201ENST00000516030 62 ntBASIC1.71□□□□□ -2.14
TOP3BO95985 SUMO2P16-201ENST00000519475 264 ntBASIC1.71□□□□□ -2.14
TOP3BO95985 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.71□□□□□ -2.14
TOP3BO95985 AL596211.1-201ENST00000569873 2277 ntBASIC1.71□□□□□ -2.14
TOP3BO95985 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
TOP3BO95985 MIR342-201ENST00000362212 99 ntBASIC1.7□□□□□ -2.14
TOP3BO95985 MIR450A1-201ENST00000362262 91 ntBASIC1.7□□□□□ -2.14
TOP3BO95985 SNORD115-34-201ENST00000362441 82 ntBASIC1.7□□□□□ -2.14
TOP3BO95985 SNORD115-12-201ENST00000362583 82 ntBASIC1.7□□□□□ -2.14
TOP3BO95985 SNORD115-29-201ENST00000362834 82 ntBASIC1.7□□□□□ -2.14
TOP3BO95985 SNORD115-9-201ENST00000362912 82 ntBASIC1.7□□□□□ -2.14
TOP3BO95985 SNORD115-21-201ENST00000362963 81 ntBASIC1.7□□□□□ -2.14
TOP3BO95985 Y_RNA.85-201ENST00000363014 111 ntBASIC1.7□□□□□ -2.14
TOP3BO95985 SNORD115-14-201ENST00000363090 81 ntBASIC1.7□□□□□ -2.14
TOP3BO95985 SNORD115-13-201ENST00000363358 82 ntBASIC1.7□□□□□ -2.14
TOP3BO95985 SNORD115-41-201ENST00000363608 82 ntBASIC1.7□□□□□ -2.14
TOP3BO95985 SNORD115-11-201ENST00000363616 82 ntBASIC1.7□□□□□ -2.14
TOP3BO95985 SNORD115-5-201ENST00000363633 82 ntBASIC1.7□□□□□ -2.14
TOP3BO95985 SNORD115-39-201ENST00000363694 82 ntBASIC1.7□□□□□ -2.14
TOP3BO95985 SNORD115-4-201ENST00000363810 82 ntBASIC1.7□□□□□ -2.14
TOP3BO95985 SNORD115-16-201ENST00000363887 82 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 221.8 ms