Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.94□□□□□ -2.26
DDX58O95786 Y_RNA.65-201ENST00000362846 100 ntBASIC0.93□□□□□ -2.26
DDX58O95786 Y_RNA.76-201ENST00000362931 109 ntBASIC0.93□□□□□ -2.26
DDX58O95786 SNORD45.3-201ENST00000363836 72 ntBASIC0.93□□□□□ -2.26
DDX58O95786 RNU6-484P-201ENST00000384016 107 ntBASIC0.93□□□□□ -2.26
DDX58O95786 Y_RNA.477-201ENST00000384352 108 ntBASIC0.93□□□□□ -2.26
DDX58O95786 Y_RNA.518-201ENST00000384552 113 ntBASIC0.93□□□□□ -2.26
DDX58O95786 RNU6-205P-201ENST00000390858 107 ntBASIC0.93□□□□□ -2.26
DDX58O95786 RNU6-381P-201ENST00000391259 108 ntBASIC0.93□□□□□ -2.26
DDX58O95786 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.93□□□□□ -2.26
DDX58O95786 RNU6-938P-201ENST00000411285 103 ntBASIC0.93□□□□□ -2.26
DDX58O95786 AF228730.3-201ENST00000436691 102 ntBASIC0.93□□□□□ -2.26
DDX58O95786 RPS29P24-201ENST00000486345 171 ntBASIC0.93□□□□□ -2.26
DDX58O95786 RNU7-53P-201ENST00000516705 60 ntBASIC0.93□□□□□ -2.26
DDX58O95786 AC133485.1-201ENST00000567176 124 ntBASIC0.93□□□□□ -2.26
DDX58O95786 AC138907.6-201ENST00000568401 126 ntBASIC0.93□□□□□ -2.26
DDX58O95786 MIR4714-201ENST00000580728 77 ntBASIC0.93□□□□□ -2.26
DDX58O95786 Y_RNA.7-201ENST00000362352 102 ntBASIC0.92□□□□□ -2.26
DDX58O95786 Y_RNA.133-201ENST00000363428 110 ntBASIC0.92□□□□□ -2.26
DDX58O95786 RNU6-728P-201ENST00000365375 104 ntBASIC0.92□□□□□ -2.26
DDX58O95786 RNU6-1189P-201ENST00000383958 107 ntBASIC0.92□□□□□ -2.26
DDX58O95786 AL138752.1-201ENST00000452964 351 ntBASIC0.92□□□□□ -2.26
DDX58O95786 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
DDX58O95786 Y_RNA.66-201ENST00000362862 102 ntBASIC0.91□□□□□ -2.26
DDX58O95786 RNU6-653P-201ENST00000363074 106 ntBASIC0.91□□□□□ -2.26
DDX58O95786 Y_RNA.308-201ENST00000365043 101 ntBASIC0.91□□□□□ -2.26
DDX58O95786 AL035398.1-201ENST00000430869 322 ntBASIC0.91□□□□□ -2.26
DDX58O95786 AL121914.1-201ENST00000450188 156 ntBASIC0.91□□□□□ -2.26
DDX58O95786 RNU6-561P-201ENST00000516222 102 ntBASIC0.91□□□□□ -2.26
DDX58O95786 RNY3P16-201ENST00000516338 101 ntBASIC0.91□□□□□ -2.26
DDX58O95786 MIR1-1-201ENST00000362147 71 ntBASIC0.9□□□□□ -2.27
DDX58O95786 RNU6-103P-201ENST00000363686 107 ntBASIC0.9□□□□□ -2.27
DDX58O95786 Y_RNA.168-201ENST00000363740 102 ntBASIC0.9□□□□□ -2.27
DDX58O95786 Y_RNA.410-201ENST00000383992 113 ntBASIC0.9□□□□□ -2.27
DDX58O95786 SNORA24-201ENST00000384096 131 ntBASIC0.9□□□□□ -2.27
DDX58O95786 RNU6-125P-201ENST00000384505 107 ntBASIC0.9□□□□□ -2.27
DDX58O95786 MIR568-201ENST00000385036 95 ntBASIC0.9□□□□□ -2.27
DDX58O95786 MIR100-201ENST00000385259 80 ntBASIC0.9□□□□□ -2.27
DDX58O95786 AC090844.1-201ENST00000422019 156 ntBASIC0.9□□□□□ -2.27
DDX58O95786 RNU6-1110P-201ENST00000516462 101 ntBASIC0.9□□□□□ -2.27
DDX58O95786 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.9□□□□□ -2.27
DDX58O95786 MIR4719-201ENST00000585233 84 ntBASIC0.9□□□□□ -2.27
DDX58O95786 AC023934.1-201ENST00000574529 2389 ntBASIC0.9□□□□□ -2.27
DDX58O95786 RNU6-1335P-201ENST00000365426 107 ntBASIC0.89□□□□□ -2.27
DDX58O95786 Y_RNA.393-201ENST00000383936 102 ntBASIC0.89□□□□□ -2.27
DDX58O95786 SNORD38B-201ENST00000384690 67 ntBASIC0.89□□□□□ -2.27
DDX58O95786 MIR508-201ENST00000384857 115 ntBASIC0.89□□□□□ -2.27
DDX58O95786 RNU6-493P-201ENST00000391321 108 ntBASIC0.89□□□□□ -2.27
DDX58O95786 RNU7-73P-201ENST00000458743 63 ntBASIC0.89□□□□□ -2.27
DDX58O95786 AL353765.1-201ENST00000605514 183 ntBASIC0.89□□□□□ -2.27
DDX58O95786 AC104465.1-201ENST00000611365 139 ntBASIC0.89□□□□□ -2.27
DDX58O95786 SNORD38B-202ENST00000625943 69 ntBASIC0.89□□□□□ -2.27
DDX58O95786 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
DDX58O95786 MIR302B-201ENST00000362188 73 ntBASIC0.88□□□□□ -2.27
DDX58O95786 MIR605-201ENST00000385078 83 ntBASIC0.88□□□□□ -2.27
DDX58O95786 MT-TN-201ENST00000387400 73 ntBASIC0.88□□□□□ -2.27
DDX58O95786 RNU6-913P-201ENST00000390913 95 ntBASIC0.88□□□□□ -2.27
DDX58O95786 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.88□□□□□ -2.27
DDX58O95786 RNU2-11P-201ENST00000459191 187 ntBASIC0.88□□□□□ -2.27
DDX58O95786 AC113410.1-201ENST00000505029 247 ntBASIC0.88□□□□□ -2.27
DDX58O95786 MIR4744-201ENST00000581563 82 ntBASIC0.88□□□□□ -2.27
DDX58O95786 MIR4264-201ENST00000583520 66 ntBASIC0.88□□□□□ -2.27
DDX58O95786 MIR4653-201ENST00000585107 83 ntBASIC0.88□□□□□ -2.27
DDX58O95786 AL590095.2-201ENST00000604136 117 ntBASIC0.88□□□□□ -2.27
DDX58O95786 Y_RNA.23-201ENST00000362496 106 ntBASIC0.87□□□□□ -2.27
DDX58O95786 RNA5SP325-201ENST00000363756 130 ntBASIC0.87□□□□□ -2.27
DDX58O95786 SNORA1.1-201ENST00000364671 133 ntBASIC0.87□□□□□ -2.27
DDX58O95786 RNU6-923P-201ENST00000364753 107 ntBASIC0.87□□□□□ -2.27
DDX58O95786 SNORA1-201ENST00000384107 130 ntBASIC0.87□□□□□ -2.27
DDX58O95786 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
DDX58O95786 SNORD77.3-201ENST00000391113 65 ntBASIC0.87□□□□□ -2.27
DDX58O95786 SNORD99-201ENST00000408612 74 ntBASIC0.87□□□□□ -2.27
DDX58O95786 RNU7-96P-201ENST00000459535 64 ntBASIC0.87□□□□□ -2.27
DDX58O95786 MIR3129-201ENST00000581095 76 ntBASIC0.87□□□□□ -2.27
DDX58O95786 Y_RNA.205-201ENST00000364128 113 ntBASIC0.86□□□□□ -2.27
DDX58O95786 RNU6-934P-201ENST00000365154 107 ntBASIC0.86□□□□□ -2.27
DDX58O95786 Y_RNA.350-201ENST00000365409 98 ntBASIC0.86□□□□□ -2.27
DDX58O95786 Y_RNA.351-201ENST00000365436 96 ntBASIC0.86□□□□□ -2.27
DDX58O95786 Y_RNA.562-201ENST00000384695 113 ntBASIC0.86□□□□□ -2.27
DDX58O95786 MIR216A-201ENST00000385063 110 ntBASIC0.86□□□□□ -2.27
DDX58O95786 HMGN1P33-201ENST00000432945 451 ntBASIC0.86□□□□□ -2.27
DDX58O95786 Y_RNA.797-201ENST00000515977 94 ntBASIC0.86□□□□□ -2.27
DDX58O95786 RN7SL793P-201ENST00000583259 296 ntBASIC0.86□□□□□ -2.27
DDX58O95786 RNU2-4P-201ENST00000606190 192 ntBASIC0.86□□□□□ -2.27
DDX58O95786 AC062037.2-201ENST00000610137 73 ntBASIC0.86□□□□□ -2.27
DDX58O95786 U4.1-201ENST00000620349 87 ntBASIC0.86□□□□□ -2.27
DDX58O95786 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
DDX58O95786 RNY4P28-201ENST00000365281 93 ntBASIC0.85□□□□□ -2.27
DDX58O95786 Y_RNA.440-201ENST00000384120 114 ntBASIC0.85□□□□□ -2.27
DDX58O95786 RNU6-196P-201ENST00000384315 107 ntBASIC0.85□□□□□ -2.27
DDX58O95786 RNY1P4-201ENST00000384595 115 ntBASIC0.85□□□□□ -2.27
DDX58O95786 SNORD83.1-201ENST00000411362 77 ntBASIC0.85□□□□□ -2.27
DDX58O95786 AC244023.1-201ENST00000426884 112 ntBASIC0.85□□□□□ -2.27
DDX58O95786 RNU7-62P-201ENST00000458856 62 ntBASIC0.85□□□□□ -2.27
DDX58O95786 RNU6-998P-201ENST00000515894 101 ntBASIC0.85□□□□□ -2.27
DDX58O95786 MIR3128-201ENST00000581957 66 ntBASIC0.85□□□□□ -2.27
DDX58O95786 AC097639.2-201ENST00000603159 172 ntBASIC0.85□□□□□ -2.27
DDX58O95786 AC242498.1-201ENST00000604134 111 ntBASIC0.85□□□□□ -2.27
DDX58O95786 AC011921.3-201ENST00000605540 361 ntBASIC0.85□□□□□ -2.27
DDX58O95786 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms