Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 RPS26P48-201ENST00000491713 339 ntBASIC2.58□□□□□ -2
GRIN3BO60391 RPL23AP63-201ENST00000498752 471 ntBASIC2.58□□□□□ -2
GRIN3BO60391 RNU6-857P-201ENST00000515893 110 ntBASIC2.58□□□□□ -2
GRIN3BO60391 AC022523.2-201ENST00000561045 150 ntBASIC2.58□□□□□ -2
GRIN3BO60391 AC022254.1-201ENST00000567857 235 ntBASIC2.58□□□□□ -2
GRIN3BO60391 BX248123.2-201ENST00000606318 124 ntBASIC2.58□□□□□ -2
GRIN3BO60391 U1.36-201ENST00000620684 176 ntBASIC2.58□□□□□ -2
GRIN3BO60391 RNU6-296P-201ENST00000384608 107 ntBASIC2.57□□□□□ -2
GRIN3BO60391 RNA5SP181-201ENST00000410246 98 ntBASIC2.57□□□□□ -2
GRIN3BO60391 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.57□□□□□ -2
GRIN3BO60391 RNU2-13P-201ENST00000515909 113 ntBASIC2.57□□□□□ -2
GRIN3BO60391 RNA5SP481-201ENST00000516814 122 ntBASIC2.57□□□□□ -2
GRIN3BO60391 MIR548Z-201ENST00000584743 97 ntBASIC2.57□□□□□ -2
GRIN3BO60391 SNORA4.2-201ENST00000365313 147 ntBASIC2.56□□□□□ -2
GRIN3BO60391 MIR548D2-201ENST00000384955 97 ntBASIC2.56□□□□□ -2
GRIN3BO60391 RNU6-938P-201ENST00000411285 103 ntBASIC2.56□□□□□ -2
GRIN3BO60391 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.56□□□□□ -2
GRIN3BO60391 RNU7-61P-201ENST00000515897 61 ntBASIC2.56□□□□□ -2
GRIN3BO60391 SNORA25.15-201ENST00000516487 89 ntBASIC2.56□□□□□ -2
GRIN3BO60391 SNORA31.25-201ENST00000517242 134 ntBASIC2.56□□□□□ -2
GRIN3BO60391 RNA5SP437-201ENST00000517249 129 ntBASIC2.56□□□□□ -2
GRIN3BO60391 RNU6-1116P-201ENST00000517269 99 ntBASIC2.56□□□□□ -2
GRIN3BO60391 MIR4666B-201ENST00000578142 81 ntBASIC2.56□□□□□ -2
GRIN3BO60391 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.56□□□□□ -2
GRIN3BO60391 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.56□□□□□ -2
GRIN3BO60391 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.55□□□□□ -2
GRIN3BO60391 RNU6-349P-201ENST00000362402 107 ntBASIC2.55□□□□□ -2
GRIN3BO60391 SNORA2.2-201ENST00000365473 135 ntBASIC2.55□□□□□ -2
GRIN3BO60391 U8.16-201ENST00000391279 133 ntBASIC2.55□□□□□ -2
GRIN3BO60391 AL445685.2-201ENST00000422551 342 ntBASIC2.55□□□□□ -2
GRIN3BO60391 RNA5SP168-201ENST00000516642 112 ntBASIC2.55□□□□□ -2
GRIN3BO60391 RNU6-267P-201ENST00000516714 103 ntBASIC2.55□□□□□ -2
GRIN3BO60391 AP003484.1-201ENST00000530974 250 ntBASIC2.55□□□□□ -2
GRIN3BO60391 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
GRIN3BO60391 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
GRIN3BO60391 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
GRIN3BO60391 RNY3P2-201ENST00000362918 102 ntBASIC2.54□□□□□ -2
GRIN3BO60391 RNU6-1099P-201ENST00000363533 107 ntBASIC2.54□□□□□ -2
GRIN3BO60391 RNY1P1-201ENST00000364372 112 ntBASIC2.54□□□□□ -2
GRIN3BO60391 Y_RNA.440-201ENST00000384120 114 ntBASIC2.54□□□□□ -2
GRIN3BO60391 SNORA67.5-201ENST00000391036 107 ntBASIC2.54□□□□□ -2
GRIN3BO60391 RNU6-644P-201ENST00000391155 98 ntBASIC2.54□□□□□ -2
GRIN3BO60391 RNU2-7P-201ENST00000410794 178 ntBASIC2.54□□□□□ -2
GRIN3BO60391 SCARNA23-201ENST00000516060 130 ntBASIC2.54□□□□□ -2
GRIN3BO60391 SNORD36C-201ENST00000516733 66 ntBASIC2.54□□□□□ -2
GRIN3BO60391 MIR4529-201ENST00000578110 78 ntBASIC2.54□□□□□ -2
GRIN3BO60391 MIR5588-201ENST00000581890 63 ntBASIC2.54□□□□□ -2
GRIN3BO60391 AC245884.12-201ENST00000615364 59 ntBASIC2.54□□□□□ -2
GRIN3BO60391 AL162726.3-218ENST00000636401 95 ntBASIC2.54□□□□□ -2
GRIN3BO60391 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
GRIN3BO60391 SNORA3A-201ENST00000364113 130 ntBASIC2.53□□□□□ -2
GRIN3BO60391 RNU6-219P-201ENST00000364728 107 ntBASIC2.53□□□□□ -2
GRIN3BO60391 AL627390.1-201ENST00000396055 340 ntBASIC2.53□□□□□ -2
GRIN3BO60391 RNA5SP450-201ENST00000411206 102 ntBASIC2.53□□□□□ -2
GRIN3BO60391 AC015922.2-201ENST00000435593 184 ntBASIC2.53□□□□□ -2
GRIN3BO60391 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.53□□□□□ -2
GRIN3BO60391 RNU6-162P-201ENST00000516228 103 ntBASIC2.53□□□□□ -2
GRIN3BO60391 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.53□□□□□ -2
GRIN3BO60391 DNAJC19P9-201ENST00000555084 351 ntBASIC2.53□□□□□ -2
GRIN3BO60391 AL049779.4-201ENST00000604500 156 ntBASIC2.53□□□□□ -2
GRIN3BO60391 AL137847.3-201ENST00000611521 109 ntBASIC2.53□□□□□ -2
GRIN3BO60391 U7.3-201ENST00000616123 62 ntBASIC2.53□□□□□ -2
GRIN3BO60391 AC012531.4-201ENST00000616509 177 ntBASIC2.53□□□□□ -2
GRIN3BO60391 AL513423.1-201ENST00000621695 132 ntBASIC2.53□□□□□ -2
GRIN3BO60391 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
GRIN3BO60391 Y_RNA.213-201ENST00000364178 111 ntBASIC2.52□□□□□ -2.01
GRIN3BO60391 RNU1-133P-201ENST00000364867 167 ntBASIC2.52□□□□□ -2.01
GRIN3BO60391 Y_RNA.298-201ENST00000364960 107 ntBASIC2.52□□□□□ -2.01
GRIN3BO60391 RNU6-402P-201ENST00000410678 103 ntBASIC2.52□□□□□ -2.01
GRIN3BO60391 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.52□□□□□ -2.01
GRIN3BO60391 AL353813.1-201ENST00000440700 253 ntBASIC2.52□□□□□ -2.01
GRIN3BO60391 RNU7-171P-201ENST00000459581 62 ntBASIC2.52□□□□□ -2.01
GRIN3BO60391 RNU6-795P-201ENST00000516323 103 ntBASIC2.52□□□□□ -2.01
GRIN3BO60391 RNU6-1018P-201ENST00000516577 106 ntBASIC2.52□□□□□ -2.01
GRIN3BO60391 SUMO2P16-201ENST00000519475 264 ntBASIC2.52□□□□□ -2.01
GRIN3BO60391 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.52□□□□□ -2.01
GRIN3BO60391 MIR4709-201ENST00000577272 72 ntBASIC2.52□□□□□ -2.01
GRIN3BO60391 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.52□□□□□ -2.01
GRIN3BO60391 AC080100.1-201ENST00000624239 5356 ntBASIC2.51□□□□□ -2.01
GRIN3BO60391 RNA5SP325-201ENST00000363756 130 ntBASIC2.51□□□□□ -2.01
GRIN3BO60391 AL451046.2-201ENST00000403074 277 ntBASIC2.51□□□□□ -2.01
GRIN3BO60391 snoU13.27-201ENST00000459278 104 ntBASIC2.51□□□□□ -2.01
GRIN3BO60391 RNU7-80P-201ENST00000459562 61 ntBASIC2.51□□□□□ -2.01
GRIN3BO60391 RNU7-123P-201ENST00000515911 60 ntBASIC2.51□□□□□ -2.01
GRIN3BO60391 RNU7-12P-201ENST00000516030 62 ntBASIC2.51□□□□□ -2.01
GRIN3BO60391 DEFB131E-201ENST00000532329 154 ntBASIC2.51□□□□□ -2.01
GRIN3BO60391 AC002984.1-201ENST00000591692 448 ntBASIC2.51□□□□□ -2.01
GRIN3BO60391 Y_RNA.783-201ENST00000613546 102 ntBASIC2.51□□□□□ -2.01
GRIN3BO60391 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.51□□□□□ -2.01
GRIN3BO60391 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
GRIN3BO60391 SNORD114-26-201ENST00000363543 72 ntBASIC2.5□□□□□ -2.01
GRIN3BO60391 RNA5SP100-201ENST00000410903 110 ntBASIC2.5□□□□□ -2.01
GRIN3BO60391 RNA5SP59-201ENST00000410922 110 ntBASIC2.5□□□□□ -2.01
GRIN3BO60391 RNU7-193P-201ENST00000516723 65 ntBASIC2.5□□□□□ -2.01
GRIN3BO60391 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.5□□□□□ -2.01
GRIN3BO60391 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.5□□□□□ -2.01
GRIN3BO60391 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.5□□□□□ -2.01
GRIN3BO60391 AC021506.2-201ENST00000612354 169 ntBASIC2.5□□□□□ -2.01
GRIN3BO60391 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.5□□□□□ -2.01
GRIN3BO60391 AC091304.10-201ENST00000641554 121 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 187.3 ms