Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 AC027279.3-201ENST00000625055 122 ntBASIC1.44□□□□□ -2.18
DDX43Q9NXZ2 MIR376A2-201ENST00000636782 80 ntBASIC1.44□□□□□ -2.18
DDX43Q9NXZ2 SNORA25.7-201ENST00000364375 127 ntBASIC1.43□□□□□ -2.18
DDX43Q9NXZ2 snoU2-30.1-201ENST00000365012 70 ntBASIC1.43□□□□□ -2.18
DDX43Q9NXZ2 Y_RNA.336-201ENST00000365307 109 ntBASIC1.43□□□□□ -2.18
DDX43Q9NXZ2 RNA5SP259-201ENST00000365541 109 ntBASIC1.43□□□□□ -2.18
DDX43Q9NXZ2 Y_RNA.542-201ENST00000384641 111 ntBASIC1.43□□□□□ -2.18
DDX43Q9NXZ2 MIR624-201ENST00000385217 97 ntBASIC1.43□□□□□ -2.18
DDX43Q9NXZ2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
DDX43Q9NXZ2 MIR513C-201ENST00000401352 84 ntBASIC1.43□□□□□ -2.18
DDX43Q9NXZ2 RNU6-955P-201ENST00000410497 104 ntBASIC1.43□□□□□ -2.18
DDX43Q9NXZ2 RNA5SP168-201ENST00000516642 112 ntBASIC1.43□□□□□ -2.18
DDX43Q9NXZ2 Y_RNA.714-201ENST00000517065 90 ntBASIC1.43□□□□□ -2.18
DDX43Q9NXZ2 AC090142.3-201ENST00000519012 385 ntBASIC1.43□□□□□ -2.18
DDX43Q9NXZ2 SNORA28-201ENST00000606769 126 ntBASIC1.43□□□□□ -2.18
DDX43Q9NXZ2 AP001340.1-201ENST00000624405 217 ntBASIC1.43□□□□□ -2.18
DDX43Q9NXZ2 RNU6-199P-201ENST00000362954 107 ntBASIC1.42□□□□□ -2.18
DDX43Q9NXZ2 RNU6-442P-201ENST00000383968 104 ntBASIC1.42□□□□□ -2.18
DDX43Q9NXZ2 RNU6-959P-201ENST00000384671 107 ntBASIC1.42□□□□□ -2.18
DDX43Q9NXZ2 MIR518E-201ENST00000385252 88 ntBASIC1.42□□□□□ -2.18
DDX43Q9NXZ2 SNORD37.2-201ENST00000391075 66 ntBASIC1.42□□□□□ -2.18
DDX43Q9NXZ2 SNORD77.3-201ENST00000391113 65 ntBASIC1.42□□□□□ -2.18
DDX43Q9NXZ2 AL034345.1-201ENST00000407768 123 ntBASIC1.42□□□□□ -2.18
DDX43Q9NXZ2 RNU6-938P-201ENST00000411285 103 ntBASIC1.42□□□□□ -2.18
DDX43Q9NXZ2 AF228730.3-201ENST00000436691 102 ntBASIC1.42□□□□□ -2.18
DDX43Q9NXZ2 RNU1-123P-201ENST00000458950 160 ntBASIC1.42□□□□□ -2.18
DDX43Q9NXZ2 RPL30P7-201ENST00000479312 323 ntBASIC1.42□□□□□ -2.18
DDX43Q9NXZ2 CYCTP-201ENST00000504253 315 ntBASIC1.42□□□□□ -2.18
DDX43Q9NXZ2 RNU6-1270P-201ENST00000517128 108 ntBASIC1.42□□□□□ -2.18
DDX43Q9NXZ2 AL353770.2-201ENST00000620024 78 ntBASIC1.42□□□□□ -2.18
DDX43Q9NXZ2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.42□□□□□ -2.18
DDX43Q9NXZ2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.42□□□□□ -2.18
DDX43Q9NXZ2 RNU6-833P-201ENST00000363486 107 ntBASIC1.41□□□□□ -2.18
DDX43Q9NXZ2 SNORD14E-201ENST00000364009 85 ntBASIC1.41□□□□□ -2.18
DDX43Q9NXZ2 Y_RNA.242-201ENST00000364473 110 ntBASIC1.41□□□□□ -2.18
DDX43Q9NXZ2 Y_RNA.280-201ENST00000364765 112 ntBASIC1.41□□□□□ -2.18
DDX43Q9NXZ2 Y_RNA.355-201ENST00000365462 98 ntBASIC1.41□□□□□ -2.18
DDX43Q9NXZ2 RNU6-1292P-201ENST00000383856 107 ntBASIC1.41□□□□□ -2.18
DDX43Q9NXZ2 Y_RNA.508-201ENST00000384502 114 ntBASIC1.41□□□□□ -2.18
DDX43Q9NXZ2 Y_RNA.547-201ENST00000384654 119 ntBASIC1.41□□□□□ -2.18
DDX43Q9NXZ2 MIR891A-201ENST00000401237 79 ntBASIC1.41□□□□□ -2.18
DDX43Q9NXZ2 MIR548O-201ENST00000408583 114 ntBASIC1.41□□□□□ -2.18
DDX43Q9NXZ2 PGBD4P5-201ENST00000445958 426 ntBASIC1.41□□□□□ -2.18
DDX43Q9NXZ2 RNU6-693P-201ENST00000516134 107 ntBASIC1.41□□□□□ -2.18
DDX43Q9NXZ2 RNA5SP236-201ENST00000516169 116 ntBASIC1.41□□□□□ -2.18
DDX43Q9NXZ2 RNU7-25P-201ENST00000516544 62 ntBASIC1.41□□□□□ -2.18
DDX43Q9NXZ2 Y_RNA.686-201ENST00000516548 134 ntBASIC1.41□□□□□ -2.18
DDX43Q9NXZ2 MIR3129-201ENST00000581095 76 ntBASIC1.41□□□□□ -2.18
DDX43Q9NXZ2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.41□□□□□ -2.18
DDX43Q9NXZ2 MIR7111-201ENST00000619751 72 ntBASIC1.41□□□□□ -2.18
DDX43Q9NXZ2 MIR26B-201ENST00000362251 77 ntBASIC1.4□□□□□ -2.19
DDX43Q9NXZ2 RNU6-1084P-201ENST00000362498 107 ntBASIC1.4□□□□□ -2.19
DDX43Q9NXZ2 Y_RNA.52-201ENST00000362760 96 ntBASIC1.4□□□□□ -2.19
DDX43Q9NXZ2 RNU6-508P-201ENST00000363231 103 ntBASIC1.4□□□□□ -2.19
DDX43Q9NXZ2 Y_RNA.116-201ENST00000363292 103 ntBASIC1.4□□□□□ -2.19
DDX43Q9NXZ2 Y_RNA.218-201ENST00000364218 104 ntBASIC1.4□□□□□ -2.19
DDX43Q9NXZ2 SNORA40-201ENST00000388090 126 ntBASIC1.4□□□□□ -2.19
DDX43Q9NXZ2 MIR548I2-201ENST00000408348 149 ntBASIC1.4□□□□□ -2.19
DDX43Q9NXZ2 RNA5SP127-201ENST00000411051 133 ntBASIC1.4□□□□□ -2.19
DDX43Q9NXZ2 AL606753.1-201ENST00000427435 87 ntBASIC1.4□□□□□ -2.19
DDX43Q9NXZ2 AC004223.1-201ENST00000479840 271 ntBASIC1.4□□□□□ -2.19
DDX43Q9NXZ2 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.4□□□□□ -2.19
DDX43Q9NXZ2 RNU4-57P-201ENST00000515980 135 ntBASIC1.4□□□□□ -2.19
DDX43Q9NXZ2 SCARNA15-202ENST00000516881 127 ntBASIC1.4□□□□□ -2.19
DDX43Q9NXZ2 AC131055.1-201ENST00000584626 316 ntBASIC1.4□□□□□ -2.19
DDX43Q9NXZ2 AL513423.1-201ENST00000621695 132 ntBASIC1.4□□□□□ -2.19
DDX43Q9NXZ2 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.4□□□□□ -2.19
DDX43Q9NXZ2 RNU6-915P-201ENST00000364943 103 ntBASIC1.39□□□□□ -2.19
DDX43Q9NXZ2 RNU6-163P-201ENST00000384396 106 ntBASIC1.39□□□□□ -2.19
DDX43Q9NXZ2 Y_RNA.584-201ENST00000391090 114 ntBASIC1.39□□□□□ -2.19
DDX43Q9NXZ2 HMGN2P32-201ENST00000444648 269 ntBASIC1.39□□□□□ -2.19
DDX43Q9NXZ2 RNU6-830P-201ENST00000516353 107 ntBASIC1.39□□□□□ -2.19
DDX43Q9NXZ2 SUMO2P16-201ENST00000519475 264 ntBASIC1.39□□□□□ -2.19
DDX43Q9NXZ2 AL512310.8-201ENST00000550183 120 ntBASIC1.39□□□□□ -2.19
DDX43Q9NXZ2 MIR6504-201ENST00000613520 61 ntBASIC1.39□□□□□ -2.19
DDX43Q9NXZ2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.38□□□□□ -2.19
DDX43Q9NXZ2 Y_RNA.37-201ENST00000362606 108 ntBASIC1.38□□□□□ -2.19
DDX43Q9NXZ2 Y_RNA.120-201ENST00000363304 110 ntBASIC1.38□□□□□ -2.19
DDX43Q9NXZ2 MIR526A1-201ENST00000384897 85 ntBASIC1.38□□□□□ -2.19
DDX43Q9NXZ2 MIR150-201ENST00000385048 84 ntBASIC1.38□□□□□ -2.19
DDX43Q9NXZ2 MIR660-201ENST00000385235 97 ntBASIC1.38□□□□□ -2.19
DDX43Q9NXZ2 SNORA40.6-201ENST00000391153 128 ntBASIC1.38□□□□□ -2.19
DDX43Q9NXZ2 MIR1276-201ENST00000408707 83 ntBASIC1.38□□□□□ -2.19
DDX43Q9NXZ2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.38□□□□□ -2.19
DDX43Q9NXZ2 AC015922.2-201ENST00000435593 184 ntBASIC1.38□□□□□ -2.19
DDX43Q9NXZ2 AC093850.1-201ENST00000454121 251 ntBASIC1.38□□□□□ -2.19
DDX43Q9NXZ2 RNU6-971P-201ENST00000516920 106 ntBASIC1.38□□□□□ -2.19
DDX43Q9NXZ2 CYP3A52P-201ENST00000563326 91 ntBASIC1.38□□□□□ -2.19
DDX43Q9NXZ2 MIR3660-201ENST00000584845 100 ntBASIC1.38□□□□□ -2.19
DDX43Q9NXZ2 AC091895.1-201ENST00000624494 256 ntBASIC1.38□□□□□ -2.19
DDX43Q9NXZ2 MTND5P32-201ENST00000560711 1802 ntBASIC1.38□□□□□ -2.19
DDX43Q9NXZ2 SNORD115-28-201ENST00000363931 81 ntBASIC1.37□□□□□ -2.19
DDX43Q9NXZ2 Y_RNA.651-201ENST00000459380 103 ntBASIC1.37□□□□□ -2.19
DDX43Q9NXZ2 RNU7-12P-201ENST00000516030 62 ntBASIC1.37□□□□□ -2.19
DDX43Q9NXZ2 SNORD36C-201ENST00000516733 66 ntBASIC1.37□□□□□ -2.19
DDX43Q9NXZ2 AP001328.1-201ENST00000528550 176 ntBASIC1.37□□□□□ -2.19
DDX43Q9NXZ2 MIR3121-201ENST00000579680 77 ntBASIC1.37□□□□□ -2.19
DDX43Q9NXZ2 MIR5197-201ENST00000583721 112 ntBASIC1.37□□□□□ -2.19
DDX43Q9NXZ2 AC134878.1-201ENST00000619901 243 ntBASIC1.37□□□□□ -2.19
DDX43Q9NXZ2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 207.3 ms