Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.79□□□□□ -2.12
TIMP4Q99727 RPL23AP42-201ENST00000471152 471 ntBASIC1.79□□□□□ -2.12
TIMP4Q99727 COX6CP6-201ENST00000490840 228 ntBASIC1.79□□□□□ -2.12
TIMP4Q99727 RNA5SP481-201ENST00000516814 122 ntBASIC1.79□□□□□ -2.12
TIMP4Q99727 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.79□□□□□ -2.12
TIMP4Q99727 AC090821.2-201ENST00000523552 176 ntBASIC1.79□□□□□ -2.12
TIMP4Q99727 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.79□□□□□ -2.12
TIMP4Q99727 DEFB122-202ENST00000569013 197 ntBASIC1.79□□□□□ -2.12
TIMP4Q99727 AL096840.1-201ENST00000603287 93 ntBASIC1.79□□□□□ -2.12
TIMP4Q99727 SNRPGP19-201ENST00000603826 189 ntBASIC1.79□□□□□ -2.12
TIMP4Q99727 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.79□□□□□ -2.12
TIMP4Q99727 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.79□□□□□ -2.12
TIMP4Q99727 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
TIMP4Q99727 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.79□□□□□ -2.12
TIMP4Q99727 RNU6-755P-201ENST00000364400 103 ntBASIC1.78□□□□□ -2.12
TIMP4Q99727 RNU6-147P-201ENST00000383983 107 ntBASIC1.78□□□□□ -2.12
TIMP4Q99727 MIR452-201ENST00000385020 85 ntBASIC1.78□□□□□ -2.12
TIMP4Q99727 PGBD4P5-201ENST00000445958 426 ntBASIC1.78□□□□□ -2.12
TIMP4Q99727 AC099513.1-201ENST00000490423 301 ntBASIC1.78□□□□□ -2.12
TIMP4Q99727 MIR514B-201ENST00000516774 80 ntBASIC1.78□□□□□ -2.12
TIMP4Q99727 SNORA31.17-201ENST00000516953 127 ntBASIC1.78□□□□□ -2.12
TIMP4Q99727 AC015712.3-201ENST00000559380 164 ntBASIC1.78□□□□□ -2.12
TIMP4Q99727 AL627230.6-201ENST00000611129 280 ntBASIC1.78□□□□□ -2.12
TIMP4Q99727 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
TIMP4Q99727 SNORD115-34-201ENST00000362441 82 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 RNA5SP432-201ENST00000362480 116 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 RNA5SP276-201ENST00000362580 94 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 SNORD115-12-201ENST00000362583 82 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 SNORD115-29-201ENST00000362834 82 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 SNORD115-9-201ENST00000362912 82 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 SNORD115-21-201ENST00000362963 81 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 SNORD115-14-201ENST00000363090 81 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 SNORD115-13-201ENST00000363358 82 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 SNORD115-41-201ENST00000363608 82 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 SNORD115-11-201ENST00000363616 82 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 SNORD115-5-201ENST00000363633 82 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 SNORD115-39-201ENST00000363694 82 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 RNU6-414P-201ENST00000363705 104 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 SNORD115-4-201ENST00000363810 82 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 SNORD115-16-201ENST00000363887 82 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 SNORD115-6-201ENST00000363942 82 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 Y_RNA.198-201ENST00000364013 98 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 SNORD115-42-201ENST00000364273 82 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 SNORD115-15-201ENST00000364809 81 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 Y_RNA.298-201ENST00000364960 107 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 SNORD115-1-201ENST00000364961 82 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 SNORD115-26-201ENST00000365067 82 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 SNORD115-10-201ENST00000365073 81 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 SNORD115-43-201ENST00000365503 82 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 Y_RNA.370-201ENST00000365589 108 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 SNORD115-36-201ENST00000365629 82 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 MIR660-201ENST00000385235 97 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 MIR759-201ENST00000390224 91 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 MIR764-201ENST00000390811 85 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 RNU2-40P-201ENST00000410833 196 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 RNA5SP489-201ENST00000410986 109 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 RNU2-11P-201ENST00000459191 187 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 RNU7-45P-201ENST00000459460 63 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 AC107297.1-201ENST00000459991 176 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 RPS29P24-201ENST00000486345 171 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 RNU7-123P-201ENST00000515911 60 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 RNA5SP182-201ENST00000516064 82 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 RNU6-295P-201ENST00000516901 104 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 RNU6-958P-201ENST00000516995 106 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 MIR4287-201ENST00000579398 78 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 MIR4305-201ENST00000583252 102 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 SNORD115-40-201ENST00000606510 82 ntBASIC1.77□□□□□ -2.13
TIMP4Q99727 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
TIMP4Q99727 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
TIMP4Q99727 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TIMP4Q99727 MIR450A1-201ENST00000362262 91 ntBASIC1.76□□□□□ -2.13
TIMP4Q99727 Y_RNA.116-201ENST00000363292 103 ntBASIC1.76□□□□□ -2.13
TIMP4Q99727 SNORA63.5-201ENST00000363548 123 ntBASIC1.76□□□□□ -2.13
TIMP4Q99727 RNU6-457P-201ENST00000363999 107 ntBASIC1.76□□□□□ -2.13
TIMP4Q99727 Y_RNA.213-201ENST00000364178 111 ntBASIC1.76□□□□□ -2.13
TIMP4Q99727 RNU6-1104P-201ENST00000384723 104 ntBASIC1.76□□□□□ -2.13
TIMP4Q99727 MIR526A1-201ENST00000384897 85 ntBASIC1.76□□□□□ -2.13
TIMP4Q99727 SNORD12C-201ENST00000386307 89 ntBASIC1.76□□□□□ -2.13
TIMP4Q99727 MT-TI-201ENST00000387365 69 ntBASIC1.76□□□□□ -2.13
TIMP4Q99727 AL035398.1-201ENST00000430869 322 ntBASIC1.76□□□□□ -2.13
TIMP4Q99727 RNU7-67P-201ENST00000459003 62 ntBASIC1.76□□□□□ -2.13
TIMP4Q99727 RNU7-96P-201ENST00000459535 64 ntBASIC1.76□□□□□ -2.13
TIMP4Q99727 RNU6-998P-201ENST00000515894 101 ntBASIC1.76□□□□□ -2.13
TIMP4Q99727 RNU2-35P-201ENST00000516446 142 ntBASIC1.76□□□□□ -2.13
TIMP4Q99727 AC022523.2-201ENST00000561045 150 ntBASIC1.76□□□□□ -2.13
TIMP4Q99727 MIR3613-201ENST00000579844 87 ntBASIC1.76□□□□□ -2.13
TIMP4Q99727 FAM106DP-201ENST00000586416 501 ntBASIC1.76□□□□□ -2.13
TIMP4Q99727 uc_338.28-201ENST00000612082 187 ntBASIC1.76□□□□□ -2.13
TIMP4Q99727 AL513423.1-201ENST00000621695 132 ntBASIC1.76□□□□□ -2.13
TIMP4Q99727 SNORA1.2-201ENST00000365189 134 ntBASIC1.75□□□□□ -2.13
TIMP4Q99727 SNORD28B-201ENST00000390993 75 ntBASIC1.75□□□□□ -2.13
TIMP4Q99727 SNORA26.9-201ENST00000391322 122 ntBASIC1.75□□□□□ -2.13
TIMP4Q99727 SNORA31.4-201ENST00000516049 129 ntBASIC1.75□□□□□ -2.13
TIMP4Q99727 RNU6-412P-201ENST00000516434 106 ntBASIC1.75□□□□□ -2.13
TIMP4Q99727 MIR548AR-201ENST00000582191 57 ntBASIC1.75□□□□□ -2.13
TIMP4Q99727 uc_338.20-201ENST00000621563 178 ntBASIC1.75□□□□□ -2.13
TIMP4Q99727 AC106754.2-201ENST00000623006 233 ntBASIC1.75□□□□□ -2.13
TIMP4Q99727 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
TIMP4Q99727 RNU6-1107P-201ENST00000364817 104 ntBASIC1.74□□□□□ -2.13
TIMP4Q99727 MIR583-201ENST00000384846 75 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 252.4 ms