Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 AL356320.1-201ENST00000429616 163 ntBASIC1.9□□□□□ -2.11
FOXRED1Q96CU9 RNU6-717P-201ENST00000459076 104 ntBASIC1.9□□□□□ -2.11
FOXRED1Q96CU9 RNU7-164P-201ENST00000459221 62 ntBASIC1.9□□□□□ -2.11
FOXRED1Q96CU9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.9□□□□□ -2.11
FOXRED1Q96CU9 DNAJC19P9-201ENST00000555084 351 ntBASIC1.9□□□□□ -2.11
FOXRED1Q96CU9 SNORA77B-201ENST00000578179 125 ntBASIC1.9□□□□□ -2.11
FOXRED1Q96CU9 MIR4764-201ENST00000580680 88 ntBASIC1.9□□□□□ -2.11
FOXRED1Q96CU9 MIR4305-201ENST00000583252 102 ntBASIC1.9□□□□□ -2.11
FOXRED1Q96CU9 AL513534.2-201ENST00000603836 250 ntBASIC1.9□□□□□ -2.11
FOXRED1Q96CU9 AL590808.1-201ENST00000618696 141 ntBASIC1.9□□□□□ -2.11
FOXRED1Q96CU9 WWP1P1-201ENST00000466609 2769 ntBASIC1.89□□□□□ -2.11
FOXRED1Q96CU9 RNU6-1325P-201ENST00000364905 105 ntBASIC1.89□□□□□ -2.11
FOXRED1Q96CU9 SNORD20-201ENST00000384550 80 ntBASIC1.89□□□□□ -2.11
FOXRED1Q96CU9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
FOXRED1Q96CU9 RNU7-73P-201ENST00000458743 63 ntBASIC1.89□□□□□ -2.11
FOXRED1Q96CU9 Y_RNA.649-201ENST00000459077 103 ntBASIC1.89□□□□□ -2.11
FOXRED1Q96CU9 RPL23AP94-201ENST00000512518 302 ntBASIC1.89□□□□□ -2.11
FOXRED1Q96CU9 SNORD33.1-201ENST00000516213 88 ntBASIC1.89□□□□□ -2.11
FOXRED1Q96CU9 AC015688.6-201ENST00000577737 104 ntBASIC1.89□□□□□ -2.11
FOXRED1Q96CU9 AL357312.1-201ENST00000603879 298 ntBASIC1.89□□□□□ -2.11
FOXRED1Q96CU9 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.89□□□□□ -2.11
FOXRED1Q96CU9 AC021613.1-201ENST00000623880 111 ntBASIC1.89□□□□□ -2.11
FOXRED1Q96CU9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
FOXRED1Q96CU9 Y_RNA.213-201ENST00000364178 111 ntBASIC1.88□□□□□ -2.11
FOXRED1Q96CU9 RNU4-16P-201ENST00000364737 141 ntBASIC1.88□□□□□ -2.11
FOXRED1Q96CU9 Y_RNA.298-201ENST00000364960 107 ntBASIC1.88□□□□□ -2.11
FOXRED1Q96CU9 RNA5SP138-201ENST00000365098 114 ntBASIC1.88□□□□□ -2.11
FOXRED1Q96CU9 MIR30A-201ENST00000385092 71 ntBASIC1.88□□□□□ -2.11
FOXRED1Q96CU9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
FOXRED1Q96CU9 AL022718.1-201ENST00000412004 84 ntBASIC1.88□□□□□ -2.11
FOXRED1Q96CU9 snoU13.9-201ENST00000458927 103 ntBASIC1.88□□□□□ -2.11
FOXRED1Q96CU9 snoU13.16-201ENST00000459350 104 ntBASIC1.88□□□□□ -2.11
FOXRED1Q96CU9 RNU6-919P-201ENST00000516731 104 ntBASIC1.88□□□□□ -2.11
FOXRED1Q96CU9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
FOXRED1Q96CU9 AC008133.2-201ENST00000624540 351 ntBASIC1.88□□□□□ -2.11
FOXRED1Q96CU9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.87□□□□□ -2.11
FOXRED1Q96CU9 RNA5SP289-201ENST00000362332 137 ntBASIC1.87□□□□□ -2.11
FOXRED1Q96CU9 RNU6-215P-201ENST00000365169 102 ntBASIC1.87□□□□□ -2.11
FOXRED1Q96CU9 MIR570-201ENST00000384917 97 ntBASIC1.87□□□□□ -2.11
FOXRED1Q96CU9 RNU6-1319P-201ENST00000390855 104 ntBASIC1.87□□□□□ -2.11
FOXRED1Q96CU9 RNU6-747P-201ENST00000390928 104 ntBASIC1.87□□□□□ -2.11
FOXRED1Q96CU9 RNU6-241P-201ENST00000391148 104 ntBASIC1.87□□□□□ -2.11
FOXRED1Q96CU9 RNU6-177P-201ENST00000411257 104 ntBASIC1.87□□□□□ -2.11
FOXRED1Q96CU9 MTATP6P29-201ENST00000415057 132 ntBASIC1.87□□□□□ -2.11
FOXRED1Q96CU9 RNA5SP281-201ENST00000516504 135 ntBASIC1.87□□□□□ -2.11
FOXRED1Q96CU9 RNY4P20-201ENST00000516678 93 ntBASIC1.87□□□□□ -2.11
FOXRED1Q96CU9 AL096840.1-201ENST00000603287 93 ntBASIC1.87□□□□□ -2.11
FOXRED1Q96CU9 AC103810.8-201ENST00000607347 118 ntBASIC1.87□□□□□ -2.11
FOXRED1Q96CU9 uc_338.20-201ENST00000621563 178 ntBASIC1.87□□□□□ -2.11
FOXRED1Q96CU9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
FOXRED1Q96CU9 AC092881.1-201ENST00000638218 2733 ntBASIC1.86□□□□□ -2.11
FOXRED1Q96CU9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
FOXRED1Q96CU9 SNORD33-201ENST00000362761 85 ntBASIC1.86□□□□□ -2.11
FOXRED1Q96CU9 Y_RNA.198-201ENST00000364013 98 ntBASIC1.86□□□□□ -2.11
FOXRED1Q96CU9 MIR221-201ENST00000385135 110 ntBASIC1.86□□□□□ -2.11
FOXRED1Q96CU9 RNA5SP425-201ENST00000410336 112 ntBASIC1.86□□□□□ -2.11
FOXRED1Q96CU9 RNA5SP364-201ENST00000516938 78 ntBASIC1.86□□□□□ -2.11
FOXRED1Q96CU9 MIR5002-201ENST00000584713 97 ntBASIC1.86□□□□□ -2.11
FOXRED1Q96CU9 HSPE1P19-201ENST00000603327 295 ntBASIC1.86□□□□□ -2.11
FOXRED1Q96CU9 MIR8063-201ENST00000621930 81 ntBASIC1.86□□□□□ -2.11
FOXRED1Q96CU9 MIR6873-201ENST00000622788 63 ntBASIC1.86□□□□□ -2.11
FOXRED1Q96CU9 AC064859.1-201ENST00000624741 174 ntBASIC1.86□□□□□ -2.11
FOXRED1Q96CU9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
FOXRED1Q96CU9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
FOXRED1Q96CU9 SNORD116-21-201ENST00000384507 92 ntBASIC1.85□□□□□ -2.11
FOXRED1Q96CU9 RNA5SP338-201ENST00000410495 85 ntBASIC1.85□□□□□ -2.11
FOXRED1Q96CU9 HMGN2P19-201ENST00000425149 265 ntBASIC1.85□□□□□ -2.11
FOXRED1Q96CU9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.85□□□□□ -2.11
FOXRED1Q96CU9 RNU6-922P-201ENST00000516753 99 ntBASIC1.85□□□□□ -2.11
FOXRED1Q96CU9 MIR6129-201ENST00000616087 109 ntBASIC1.85□□□□□ -2.11
FOXRED1Q96CU9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.85□□□□□ -2.11
FOXRED1Q96CU9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
FOXRED1Q96CU9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
FOXRED1Q96CU9 RNA5SP144-201ENST00000410846 116 ntBASIC1.84□□□□□ -2.11
FOXRED1Q96CU9 AL035461.1-201ENST00000421490 332 ntBASIC1.84□□□□□ -2.11
FOXRED1Q96CU9 RNU7-123P-201ENST00000515911 60 ntBASIC1.84□□□□□ -2.11
FOXRED1Q96CU9 SNORD111.1-201ENST00000516421 86 ntBASIC1.84□□□□□ -2.11
FOXRED1Q96CU9 MIR1273D-201ENST00000577266 86 ntBASIC1.84□□□□□ -2.11
FOXRED1Q96CU9 AL020996.3-201ENST00000606617 222 ntBASIC1.84□□□□□ -2.11
FOXRED1Q96CU9 GHRLOS.1-201ENST00000610995 70 ntBASIC1.84□□□□□ -2.11
FOXRED1Q96CU9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.83□□□□□ -2.12
FOXRED1Q96CU9 Y_RNA.81-201ENST00000362997 102 ntBASIC1.83□□□□□ -2.12
FOXRED1Q96CU9 RNU6-880P-201ENST00000384526 107 ntBASIC1.83□□□□□ -2.12
FOXRED1Q96CU9 MIR548A1-201ENST00000385041 97 ntBASIC1.83□□□□□ -2.12
FOXRED1Q96CU9 HSPE1P24-201ENST00000450782 238 ntBASIC1.83□□□□□ -2.12
FOXRED1Q96CU9 HMGN2P23-201ENST00000456759 269 ntBASIC1.83□□□□□ -2.12
FOXRED1Q96CU9 RNU7-45P-201ENST00000459460 63 ntBASIC1.83□□□□□ -2.12
FOXRED1Q96CU9 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.83□□□□□ -2.12
FOXRED1Q96CU9 MIR3198-2-201ENST00000577868 80 ntBASIC1.83□□□□□ -2.12
FOXRED1Q96CU9 MIR6717-201ENST00000622747 73 ntBASIC1.83□□□□□ -2.12
FOXRED1Q96CU9 MIR4251-201ENST00000635819 61 ntBASIC1.83□□□□□ -2.12
FOXRED1Q96CU9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
FOXRED1Q96CU9 RNY4P6-201ENST00000363667 96 ntBASIC1.82□□□□□ -2.12
FOXRED1Q96CU9 RNA5SP48-201ENST00000363969 126 ntBASIC1.82□□□□□ -2.12
FOXRED1Q96CU9 SNORA1.1-201ENST00000364671 133 ntBASIC1.82□□□□□ -2.12
FOXRED1Q96CU9 MIR676-201ENST00000390702 67 ntBASIC1.82□□□□□ -2.12
FOXRED1Q96CU9 RNU6-913P-201ENST00000390913 95 ntBASIC1.82□□□□□ -2.12
FOXRED1Q96CU9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.82□□□□□ -2.12
FOXRED1Q96CU9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
FOXRED1Q96CU9 RPL23AP42-201ENST00000471152 471 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 199.2 ms