Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 SNORD115-12-201ENST00000362583 82 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 SNORD115-29-201ENST00000362834 82 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 SNORD115-9-201ENST00000362912 82 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 SNORD115-21-201ENST00000362963 81 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 SNORD115-14-201ENST00000363090 81 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 SNORD115-13-201ENST00000363358 82 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 SNORD115-41-201ENST00000363608 82 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 SNORD115-11-201ENST00000363616 82 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 SNORD115-5-201ENST00000363633 82 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 SNORD115-39-201ENST00000363694 82 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 SNORD115-4-201ENST00000363810 82 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 SNORD115-16-201ENST00000363887 82 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 SNORD115-6-201ENST00000363942 82 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 SNORD115-42-201ENST00000364273 82 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 SNORD115-15-201ENST00000364809 81 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 SNORD115-1-201ENST00000364961 82 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 SNORD115-26-201ENST00000365067 82 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 SNORD115-10-201ENST00000365073 81 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 SNORD115-43-201ENST00000365503 82 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 SNORD115-36-201ENST00000365629 82 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
RTF1Q92541 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 Y_RNA.690-201ENST00000516603 95 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 SNORA31.24-201ENST00000517232 57 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 SUMO2P16-201ENST00000519475 264 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 SNORA77B-201ENST00000578179 125 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 SNORD115-40-201ENST00000606510 82 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.99□□□□□ -2.09
RTF1Q92541 MIR513A1-201ENST00000385138 129 ntBASIC1.98□□□□□ -2.09
RTF1Q92541 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.98□□□□□ -2.09
RTF1Q92541 RNU7-95P-201ENST00000459222 64 ntBASIC1.98□□□□□ -2.09
RTF1Q92541 RNU6-971P-201ENST00000516920 106 ntBASIC1.98□□□□□ -2.09
RTF1Q92541 MIR3121-201ENST00000579680 77 ntBASIC1.98□□□□□ -2.09
RTF1Q92541 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.98□□□□□ -2.09
RTF1Q92541 AC103810.8-201ENST00000607347 118 ntBASIC1.98□□□□□ -2.09
RTF1Q92541 ICE2P2-201ENST00000483823 2787 ntBASIC1.98□□□□□ -2.09
RTF1Q92541 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.97□□□□□ -2.09
RTF1Q92541 MIR653-201ENST00000385279 96 ntBASIC1.97□□□□□ -2.09
RTF1Q92541 RNU6-1211P-201ENST00000459179 105 ntBASIC1.97□□□□□ -2.09
RTF1Q92541 SNORA18.7-201ENST00000516910 131 ntBASIC1.97□□□□□ -2.09
RTF1Q92541 FAM106DP-201ENST00000586416 501 ntBASIC1.97□□□□□ -2.09
RTF1Q92541 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.97□□□□□ -2.09
RTF1Q92541 Y_RNA.241-201ENST00000364470 117 ntBASIC1.96□□□□□ -2.1
RTF1Q92541 Y_RNA.280-201ENST00000364765 112 ntBASIC1.96□□□□□ -2.1
RTF1Q92541 RNU6-80P-201ENST00000384195 107 ntBASIC1.96□□□□□ -2.1
RTF1Q92541 SNORA27-201ENST00000384323 126 ntBASIC1.96□□□□□ -2.1
RTF1Q92541 MIR1304-201ENST00000408243 91 ntBASIC1.96□□□□□ -2.1
RTF1Q92541 MIR548I2-201ENST00000408348 149 ntBASIC1.96□□□□□ -2.1
RTF1Q92541 SNORD123-201ENST00000459473 70 ntBASIC1.96□□□□□ -2.1
RTF1Q92541 RNU7-80P-201ENST00000459562 61 ntBASIC1.96□□□□□ -2.1
RTF1Q92541 AC107297.1-201ENST00000459991 176 ntBASIC1.96□□□□□ -2.1
RTF1Q92541 RNU6-917P-201ENST00000516294 104 ntBASIC1.96□□□□□ -2.1
RTF1Q92541 RNU6-62P-201ENST00000516526 102 ntBASIC1.96□□□□□ -2.1
RTF1Q92541 RNU6-113P-201ENST00000516653 101 ntBASIC1.96□□□□□ -2.1
RTF1Q92541 RNU7-181P-201ENST00000517234 74 ntBASIC1.96□□□□□ -2.1
RTF1Q92541 AC090049.2-201ENST00000550377 109 ntBASIC1.96□□□□□ -2.1
RTF1Q92541 AC015688.6-201ENST00000577737 104 ntBASIC1.96□□□□□ -2.1
RTF1Q92541 RNU6-309P-201ENST00000364573 106 ntBASIC1.95□□□□□ -2.1
RTF1Q92541 RNU6-22P-201ENST00000384355 107 ntBASIC1.95□□□□□ -2.1
RTF1Q92541 AL354695.1-201ENST00000427935 228 ntBASIC1.95□□□□□ -2.1
RTF1Q92541 RPS26P48-201ENST00000491713 339 ntBASIC1.95□□□□□ -2.1
RTF1Q92541 RNU6-1053P-201ENST00000515930 101 ntBASIC1.95□□□□□ -2.1
RTF1Q92541 SNORA44.1-201ENST00000517031 108 ntBASIC1.95□□□□□ -2.1
RTF1Q92541 SNORA74.3-201ENST00000517108 154 ntBASIC1.95□□□□□ -2.1
RTF1Q92541 AL022345.2-201ENST00000606307 135 ntBASIC1.95□□□□□ -2.1
RTF1Q92541 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RTF1Q92541 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.94□□□□□ -2.1
RTF1Q92541 Y_RNA.218-201ENST00000364218 104 ntBASIC1.94□□□□□ -2.1
RTF1Q92541 RNA5SP259-201ENST00000365541 109 ntBASIC1.94□□□□□ -2.1
RTF1Q92541 Y_RNA.370-201ENST00000365589 108 ntBASIC1.94□□□□□ -2.1
RTF1Q92541 Y_RNA.454-201ENST00000384224 113 ntBASIC1.94□□□□□ -2.1
RTF1Q92541 AC008267.6-201ENST00000441664 139 ntBASIC1.94□□□□□ -2.1
RTF1Q92541 AC009474.2-201ENST00000451383 136 ntBASIC1.94□□□□□ -2.1
RTF1Q92541 RNU7-96P-201ENST00000459535 64 ntBASIC1.94□□□□□ -2.1
RTF1Q92541 AC023790.1-201ENST00000482174 347 ntBASIC1.94□□□□□ -2.1
RTF1Q92541 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.94□□□□□ -2.1
RTF1Q92541 RNU6-322P-201ENST00000516010 103 ntBASIC1.94□□□□□ -2.1
RTF1Q92541 RNU6-479P-201ENST00000516348 105 ntBASIC1.94□□□□□ -2.1
RTF1Q92541 RNU1-92P-201ENST00000517017 135 ntBASIC1.94□□□□□ -2.1
RTF1Q92541 AC090821.2-201ENST00000523552 176 ntBASIC1.94□□□□□ -2.1
RTF1Q92541 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.94□□□□□ -2.1
RTF1Q92541 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.94□□□□□ -2.1
RTF1Q92541 AC106754.2-201ENST00000623006 233 ntBASIC1.94□□□□□ -2.1
RTF1Q92541 ZNF209P-201ENST00000593450 2304 ntBASIC1.94□□□□□ -2.1
RTF1Q92541 Y_RNA.71-201ENST00000362892 104 ntBASIC1.93□□□□□ -2.1
RTF1Q92541 Y_RNA.114-201ENST00000363265 113 ntBASIC1.93□□□□□ -2.1
RTF1Q92541 Y_RNA.351-201ENST00000365436 96 ntBASIC1.93□□□□□ -2.1
RTF1Q92541 MIR30A-201ENST00000385092 71 ntBASIC1.93□□□□□ -2.1
RTF1Q92541 Y_RNA.651-201ENST00000459380 103 ntBASIC1.93□□□□□ -2.1
RTF1Q92541 RPS29P24-201ENST00000486345 171 ntBASIC1.93□□□□□ -2.1
RTF1Q92541 RNU2-13P-201ENST00000515909 113 ntBASIC1.93□□□□□ -2.1
RTF1Q92541 RNU7-70P-201ENST00000516941 66 ntBASIC1.93□□□□□ -2.1
RTF1Q92541 MIR548AR-201ENST00000582191 57 ntBASIC1.93□□□□□ -2.1
RTF1Q92541 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.92□□□□□ -2.1
RTF1Q92541 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.92□□□□□ -2.1
RTF1Q92541 RNU6-647P-201ENST00000364243 107 ntBASIC1.92□□□□□ -2.1
RTF1Q92541 SNORD116-14-201ENST00000383894 92 ntBASIC1.92□□□□□ -2.1
RTF1Q92541 SNORD116-17-201ENST00000383929 92 ntBASIC1.92□□□□□ -2.1
RTF1Q92541 SNORA70.7-201ENST00000384159 133 ntBASIC1.92□□□□□ -2.1
RTF1Q92541 SNORD116-15-201ENST00000384445 92 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 264.1 ms