Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 RNU2-70P-201ENST00000410718 179 ntBASIC0.79□□□□□ -2.28
CCDC63Q8NA47 RNU7-67P-201ENST00000459003 62 ntBASIC0.79□□□□□ -2.28
CCDC63Q8NA47 AC107297.1-201ENST00000459991 176 ntBASIC0.79□□□□□ -2.28
CCDC63Q8NA47 AC134878.1-201ENST00000619901 243 ntBASIC0.79□□□□□ -2.28
CCDC63Q8NA47 Y_RNA.23-201ENST00000362496 106 ntBASIC0.78□□□□□ -2.28
CCDC63Q8NA47 Y_RNA.54-201ENST00000362766 105 ntBASIC0.78□□□□□ -2.28
CCDC63Q8NA47 Y_RNA.288-201ENST00000364854 92 ntBASIC0.78□□□□□ -2.28
CCDC63Q8NA47 RNU4-17P-201ENST00000365598 141 ntBASIC0.78□□□□□ -2.28
CCDC63Q8NA47 SNORA27-201ENST00000384323 126 ntBASIC0.78□□□□□ -2.28
CCDC63Q8NA47 SNORD89-201ENST00000390981 114 ntBASIC0.78□□□□□ -2.28
CCDC63Q8NA47 AC244023.1-201ENST00000426884 112 ntBASIC0.78□□□□□ -2.28
CCDC63Q8NA47 RNU7-73P-201ENST00000458743 63 ntBASIC0.78□□□□□ -2.28
CCDC63Q8NA47 U7.7-201ENST00000459276 60 ntBASIC0.78□□□□□ -2.28
CCDC63Q8NA47 snoU13.21-201ENST00000459368 105 ntBASIC0.78□□□□□ -2.28
CCDC63Q8NA47 MTND1P19-201ENST00000511780 315 ntBASIC0.78□□□□□ -2.28
CCDC63Q8NA47 Y_RNA.668-201ENST00000516233 93 ntBASIC0.78□□□□□ -2.28
CCDC63Q8NA47 RNU6-958P-201ENST00000516995 106 ntBASIC0.78□□□□□ -2.28
CCDC63Q8NA47 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.78□□□□□ -2.28
CCDC63Q8NA47 AC242498.1-201ENST00000604134 111 ntBASIC0.78□□□□□ -2.28
CCDC63Q8NA47 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
CCDC63Q8NA47 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CCDC63Q8NA47 RNU6-369P-201ENST00000362515 102 ntBASIC0.77□□□□□ -2.29
CCDC63Q8NA47 Y_RNA.292-201ENST00000364904 97 ntBASIC0.77□□□□□ -2.29
CCDC63Q8NA47 SNORA1-201ENST00000384107 130 ntBASIC0.77□□□□□ -2.29
CCDC63Q8NA47 RNU6-205P-201ENST00000390858 107 ntBASIC0.77□□□□□ -2.29
CCDC63Q8NA47 SNORA26-201ENST00000391286 122 ntBASIC0.77□□□□□ -2.29
CCDC63Q8NA47 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.77□□□□□ -2.29
CCDC63Q8NA47 RNU6-1132P-201ENST00000459214 107 ntBASIC0.77□□□□□ -2.29
CCDC63Q8NA47 RPS29P24-201ENST00000486345 171 ntBASIC0.77□□□□□ -2.29
CCDC63Q8NA47 AL353765.1-201ENST00000605514 183 ntBASIC0.77□□□□□ -2.29
CCDC63Q8NA47 MIR8055-201ENST00000610739 97 ntBASIC0.77□□□□□ -2.29
CCDC63Q8NA47 MIR376A2-201ENST00000636782 80 ntBASIC0.77□□□□□ -2.29
CCDC63Q8NA47 Y_RNA.262-201ENST00000364641 102 ntBASIC0.76□□□□□ -2.29
CCDC63Q8NA47 RNU6-392P-201ENST00000364926 101 ntBASIC0.76□□□□□ -2.29
CCDC63Q8NA47 MIR1827-201ENST00000408549 66 ntBASIC0.76□□□□□ -2.29
CCDC63Q8NA47 MIR548H3-201ENST00000408771 118 ntBASIC0.76□□□□□ -2.29
CCDC63Q8NA47 RNU6-994P-201ENST00000410507 111 ntBASIC0.76□□□□□ -2.29
CCDC63Q8NA47 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.76□□□□□ -2.29
CCDC63Q8NA47 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.76□□□□□ -2.29
CCDC63Q8NA47 RNU6-1110P-201ENST00000516462 101 ntBASIC0.76□□□□□ -2.29
CCDC63Q8NA47 MIR4264-201ENST00000583520 66 ntBASIC0.76□□□□□ -2.29
CCDC63Q8NA47 Y_RNA.162-201ENST00000363683 102 ntBASIC0.75□□□□□ -2.29
CCDC63Q8NA47 Y_RNA.199-201ENST00000364014 102 ntBASIC0.75□□□□□ -2.29
CCDC63Q8NA47 RNY4P28-201ENST00000365281 93 ntBASIC0.75□□□□□ -2.29
CCDC63Q8NA47 Y_RNA.440-201ENST00000384120 114 ntBASIC0.75□□□□□ -2.29
CCDC63Q8NA47 Y_RNA.539-201ENST00000384635 107 ntBASIC0.75□□□□□ -2.29
CCDC63Q8NA47 SNORD77.3-201ENST00000391113 65 ntBASIC0.75□□□□□ -2.29
CCDC63Q8NA47 SNORD58.1-201ENST00000391313 66 ntBASIC0.75□□□□□ -2.29
CCDC63Q8NA47 HMGN1P33-201ENST00000432945 451 ntBASIC0.75□□□□□ -2.29
CCDC63Q8NA47 MTND5P15-201ENST00000434246 349 ntBASIC0.75□□□□□ -2.29
CCDC63Q8NA47 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.75□□□□□ -2.29
CCDC63Q8NA47 AC113410.1-201ENST00000505029 247 ntBASIC0.75□□□□□ -2.29
CCDC63Q8NA47 AC108729.3-201ENST00000513484 108 ntBASIC0.75□□□□□ -2.29
CCDC63Q8NA47 RNU6-1045P-201ENST00000516321 107 ntBASIC0.75□□□□□ -2.29
CCDC63Q8NA47 RNY3P16-201ENST00000516338 101 ntBASIC0.75□□□□□ -2.29
CCDC63Q8NA47 MIR4719-201ENST00000585233 84 ntBASIC0.75□□□□□ -2.29
CCDC63Q8NA47 AL359821.1-201ENST00000605519 182 ntBASIC0.75□□□□□ -2.29
CCDC63Q8NA47 Z97988.1-201ENST00000637697 135 ntBASIC0.75□□□□□ -2.29
CCDC63Q8NA47 Y_RNA.410-201ENST00000383992 113 ntBASIC0.74□□□□□ -2.29
CCDC63Q8NA47 Y_RNA.556-201ENST00000384677 113 ntBASIC0.74□□□□□ -2.29
CCDC63Q8NA47 RNU6-1190P-201ENST00000410811 104 ntBASIC0.74□□□□□ -2.29
CCDC63Q8NA47 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.74□□□□□ -2.29
CCDC63Q8NA47 RNU6-998P-201ENST00000515894 101 ntBASIC0.74□□□□□ -2.29
CCDC63Q8NA47 AP000753.3-201ENST00000604083 169 ntBASIC0.74□□□□□ -2.29
CCDC63Q8NA47 uc_338.6-201ENST00000613544 171 ntBASIC0.74□□□□□ -2.29
CCDC63Q8NA47 7SK.10-201ENST00000621414 298 ntBASIC0.74□□□□□ -2.29
CCDC63Q8NA47 AC023934.1-201ENST00000574529 2389 ntBASIC0.73□□□□□ -2.29
CCDC63Q8NA47 SNORD114-27-201ENST00000363766 70 ntBASIC0.73□□□□□ -2.29
CCDC63Q8NA47 RNU6-1189P-201ENST00000383958 107 ntBASIC0.73□□□□□ -2.29
CCDC63Q8NA47 SNORD99-201ENST00000408612 74 ntBASIC0.73□□□□□ -2.29
CCDC63Q8NA47 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.73□□□□□ -2.29
CCDC63Q8NA47 RNU4-43P-201ENST00000410628 137 ntBASIC0.73□□□□□ -2.29
CCDC63Q8NA47 AL138752.1-201ENST00000452964 351 ntBASIC0.73□□□□□ -2.29
CCDC63Q8NA47 RNU7-96P-201ENST00000459535 64 ntBASIC0.73□□□□□ -2.29
CCDC63Q8NA47 RNU7-53P-201ENST00000516705 60 ntBASIC0.73□□□□□ -2.29
CCDC63Q8NA47 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
CCDC63Q8NA47 RNU6-103P-201ENST00000363686 107 ntBASIC0.72□□□□□ -2.29
CCDC63Q8NA47 SNORD27-201ENST00000363981 72 ntBASIC0.72□□□□□ -2.29
CCDC63Q8NA47 Y_RNA.269-201ENST00000364685 89 ntBASIC0.72□□□□□ -2.29
CCDC63Q8NA47 RNU6-728P-201ENST00000365375 104 ntBASIC0.72□□□□□ -2.29
CCDC63Q8NA47 Y_RNA.477-201ENST00000384352 108 ntBASIC0.72□□□□□ -2.29
CCDC63Q8NA47 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.72□□□□□ -2.29
CCDC63Q8NA47 AC067940.1-201ENST00000458411 300 ntBASIC0.72□□□□□ -2.29
CCDC63Q8NA47 Y_RNA.680-201ENST00000516441 93 ntBASIC0.72□□□□□ -2.29
CCDC63Q8NA47 RNU6-113P-201ENST00000516653 101 ntBASIC0.72□□□□□ -2.29
CCDC63Q8NA47 MIR3973-201ENST00000579824 107 ntBASIC0.72□□□□□ -2.29
CCDC63Q8NA47 AC025627.3-201ENST00000582078 182 ntBASIC0.72□□□□□ -2.29
CCDC63Q8NA47 MIR4769-201ENST00000584126 77 ntBASIC0.72□□□□□ -2.29
CCDC63Q8NA47 AC099654.10-201ENST00000640395 161 ntBASIC0.72□□□□□ -2.29
CCDC63Q8NA47 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.71□□□□□ -2.3
CCDC63Q8NA47 Y_RNA.20-201ENST00000362479 113 ntBASIC0.71□□□□□ -2.3
CCDC63Q8NA47 Y_RNA.308-201ENST00000365043 101 ntBASIC0.71□□□□□ -2.3
CCDC63Q8NA47 RNU6-110P-201ENST00000384508 104 ntBASIC0.71□□□□□ -2.3
CCDC63Q8NA47 MIR548I3-201ENST00000408378 149 ntBASIC0.71□□□□□ -2.3
CCDC63Q8NA47 RNU6-602P-201ENST00000411155 105 ntBASIC0.71□□□□□ -2.3
CCDC63Q8NA47 SNORD83.1-201ENST00000411362 77 ntBASIC0.71□□□□□ -2.3
CCDC63Q8NA47 RPS26P5-201ENST00000418544 335 ntBASIC0.71□□□□□ -2.3
CCDC63Q8NA47 RNU2-11P-201ENST00000459191 187 ntBASIC0.71□□□□□ -2.3
CCDC63Q8NA47 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.71□□□□□ -2.3
CCDC63Q8NA47 Y_RNA.673-201ENST00000516306 88 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 269.2 ms