Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC107297.1-201ENST00000459991 176 ntBASIC1.43□□□□□ -2.18
CLIP4Q8N3C7 AC023790.1-201ENST00000482174 347 ntBASIC1.43□□□□□ -2.18
CLIP4Q8N3C7 RNU6-237P-201ENST00000515985 71 ntBASIC1.43□□□□□ -2.18
CLIP4Q8N3C7 RNU6-970P-201ENST00000516312 107 ntBASIC1.43□□□□□ -2.18
CLIP4Q8N3C7 AC015688.6-201ENST00000577737 104 ntBASIC1.43□□□□□ -2.18
CLIP4Q8N3C7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.43□□□□□ -2.18
CLIP4Q8N3C7 Y_RNA.757-201ENST00000578934 114 ntBASIC1.43□□□□□ -2.18
CLIP4Q8N3C7 AL022345.2-201ENST00000606307 135 ntBASIC1.43□□□□□ -2.18
CLIP4Q8N3C7 MIR342-201ENST00000362212 99 ntBASIC1.42□□□□□ -2.18
CLIP4Q8N3C7 SNORD113-1-201ENST00000365321 69 ntBASIC1.42□□□□□ -2.18
CLIP4Q8N3C7 RNU6-1117P-201ENST00000384525 104 ntBASIC1.42□□□□□ -2.18
CLIP4Q8N3C7 RNA5SP236-201ENST00000516169 116 ntBASIC1.42□□□□□ -2.18
CLIP4Q8N3C7 RNU7-70P-201ENST00000516941 66 ntBASIC1.42□□□□□ -2.18
CLIP4Q8N3C7 SNORA74.3-201ENST00000517108 154 ntBASIC1.42□□□□□ -2.18
CLIP4Q8N3C7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.42□□□□□ -2.18
CLIP4Q8N3C7 MIR3683-201ENST00000580847 82 ntBASIC1.42□□□□□ -2.18
CLIP4Q8N3C7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.42□□□□□ -2.18
CLIP4Q8N3C7 MIR7974-201ENST00000615835 79 ntBASIC1.42□□□□□ -2.18
CLIP4Q8N3C7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 SNORD115-34-201ENST00000362441 82 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 SNORD115-12-201ENST00000362583 82 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 SNORD115-29-201ENST00000362834 82 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 SNORD115-9-201ENST00000362912 82 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 SNORD115-21-201ENST00000362963 81 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 SNORD115-14-201ENST00000363090 81 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 SNORD115-13-201ENST00000363358 82 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 SNORD115-41-201ENST00000363608 82 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 SNORD115-11-201ENST00000363616 82 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 SNORD115-5-201ENST00000363633 82 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 SNORD115-39-201ENST00000363694 82 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 SNORD115-4-201ENST00000363810 82 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 SNORD115-16-201ENST00000363887 82 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 SNORD115-6-201ENST00000363942 82 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 RNA5SP99-201ENST00000364020 114 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 SNORD115-42-201ENST00000364273 82 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 SNORD115-15-201ENST00000364809 81 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 SNORD115-1-201ENST00000364961 82 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 SNORD115-26-201ENST00000365067 82 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 SNORD115-10-201ENST00000365073 81 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 SNORD115-43-201ENST00000365503 82 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 SNORD115-36-201ENST00000365629 82 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 MIR653-201ENST00000385279 96 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 SNORD28B-201ENST00000390993 75 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 MIR934-201ENST00000401241 83 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 RNU6-322P-201ENST00000516010 103 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 RNU6-1234P-201ENST00000516877 103 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 AC090821.2-201ENST00000523552 176 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 AC090049.2-201ENST00000550377 109 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 SNORD115-40-201ENST00000606510 82 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.41□□□□□ -2.18
CLIP4Q8N3C7 Y_RNA.71-201ENST00000362892 104 ntBASIC1.4□□□□□ -2.19
CLIP4Q8N3C7 Y_RNA.114-201ENST00000363265 113 ntBASIC1.4□□□□□ -2.19
CLIP4Q8N3C7 MIR570-201ENST00000384917 97 ntBASIC1.4□□□□□ -2.19
CLIP4Q8N3C7 MIR1323-201ENST00000408090 73 ntBASIC1.4□□□□□ -2.19
CLIP4Q8N3C7 MIR1304-201ENST00000408243 91 ntBASIC1.4□□□□□ -2.19
CLIP4Q8N3C7 SNX2P2-201ENST00000424553 323 ntBASIC1.4□□□□□ -2.19
CLIP4Q8N3C7 Y_RNA.651-201ENST00000459380 103 ntBASIC1.4□□□□□ -2.19
CLIP4Q8N3C7 RNU7-80P-201ENST00000459562 61 ntBASIC1.4□□□□□ -2.19
CLIP4Q8N3C7 AL353997.5-201ENST00000618886 171 ntBASIC1.4□□□□□ -2.19
CLIP4Q8N3C7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
CLIP4Q8N3C7 MIR8063-201ENST00000621930 81 ntBASIC1.4□□□□□ -2.19
CLIP4Q8N3C7 AL596211.1-201ENST00000569873 2277 ntBASIC1.4□□□□□ -2.19
CLIP4Q8N3C7 Y_RNA.218-201ENST00000364218 104 ntBASIC1.39□□□□□ -2.19
CLIP4Q8N3C7 RNU1-133P-201ENST00000364867 167 ntBASIC1.39□□□□□ -2.19
CLIP4Q8N3C7 RNU6-80P-201ENST00000384195 107 ntBASIC1.39□□□□□ -2.19
CLIP4Q8N3C7 RNU6-22P-201ENST00000384355 107 ntBASIC1.39□□□□□ -2.19
CLIP4Q8N3C7 RNU6-1067P-201ENST00000384752 107 ntBASIC1.39□□□□□ -2.19
CLIP4Q8N3C7 RNU6-482P-201ENST00000391068 107 ntBASIC1.39□□□□□ -2.19
CLIP4Q8N3C7 AL451046.2-201ENST00000403074 277 ntBASIC1.39□□□□□ -2.19
CLIP4Q8N3C7 RNU7-67P-201ENST00000459003 62 ntBASIC1.39□□□□□ -2.19
CLIP4Q8N3C7 RPS29P24-201ENST00000486345 171 ntBASIC1.39□□□□□ -2.19
CLIP4Q8N3C7 RNU6-62P-201ENST00000516526 102 ntBASIC1.39□□□□□ -2.19
CLIP4Q8N3C7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.39□□□□□ -2.19
CLIP4Q8N3C7 BX248123.2-201ENST00000606318 124 ntBASIC1.39□□□□□ -2.19
CLIP4Q8N3C7 AC091932.4-201ENST00000623386 200 ntBASIC1.39□□□□□ -2.19
CLIP4Q8N3C7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CLIP4Q8N3C7 RNU6-235P-201ENST00000362644 107 ntBASIC1.38□□□□□ -2.19
CLIP4Q8N3C7 SNORD1A-201ENST00000364968 72 ntBASIC1.38□□□□□ -2.19
CLIP4Q8N3C7 RNA5SP190-201ENST00000365222 118 ntBASIC1.38□□□□□ -2.19
CLIP4Q8N3C7 Y_RNA.454-201ENST00000384224 113 ntBASIC1.38□□□□□ -2.19
CLIP4Q8N3C7 MIR520C-201ENST00000385005 87 ntBASIC1.38□□□□□ -2.19
CLIP4Q8N3C7 RNU6-955P-201ENST00000410497 104 ntBASIC1.38□□□□□ -2.19
CLIP4Q8N3C7 AL158147.1-201ENST00000443970 75 ntBASIC1.38□□□□□ -2.19
CLIP4Q8N3C7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.38□□□□□ -2.19
CLIP4Q8N3C7 RNU7-96P-201ENST00000459535 64 ntBASIC1.38□□□□□ -2.19
CLIP4Q8N3C7 RNU6-998P-201ENST00000515894 101 ntBASIC1.38□□□□□ -2.19
CLIP4Q8N3C7 RNU6-922P-201ENST00000516753 99 ntBASIC1.38□□□□□ -2.19
CLIP4Q8N3C7 RNU6-958P-201ENST00000516995 106 ntBASIC1.38□□□□□ -2.19
CLIP4Q8N3C7 MIR4764-201ENST00000580680 88 ntBASIC1.38□□□□□ -2.19
CLIP4Q8N3C7 MIR4285-201ENST00000581001 85 ntBASIC1.38□□□□□ -2.19
CLIP4Q8N3C7 AL513534.2-201ENST00000603836 250 ntBASIC1.38□□□□□ -2.19
CLIP4Q8N3C7 MIR4791-201ENST00000607666 84 ntBASIC1.38□□□□□ -2.19
CLIP4Q8N3C7 AL365222.1-201ENST00000614661 98 ntBASIC1.38□□□□□ -2.19
CLIP4Q8N3C7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.38□□□□□ -2.19
CLIP4Q8N3C7 MIR302B-201ENST00000362188 73 ntBASIC1.37□□□□□ -2.19
CLIP4Q8N3C7 MIR548I2-201ENST00000408348 149 ntBASIC1.37□□□□□ -2.19
CLIP4Q8N3C7 AL035398.1-201ENST00000430869 322 ntBASIC1.37□□□□□ -2.19
CLIP4Q8N3C7 RNU2-13P-201ENST00000515909 113 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 290.7 ms