Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.11□□□□□ -2.07
SYNE4Q8N205 RNU6-168P-201ENST00000516189 101 ntBASIC2.11□□□□□ -2.07
SYNE4Q8N205 RNA5SP170-201ENST00000517150 101 ntBASIC2.11□□□□□ -2.07
SYNE4Q8N205 AC084364.2-201ENST00000546924 395 ntBASIC2.11□□□□□ -2.07
SYNE4Q8N205 MIR4679-2-201ENST00000578358 77 ntBASIC2.11□□□□□ -2.07
SYNE4Q8N205 AC069114.2-201ENST00000604699 304 ntBASIC2.11□□□□□ -2.07
SYNE4Q8N205 MIR8054-201ENST00000620877 86 ntBASIC2.11□□□□□ -2.07
SYNE4Q8N205 MIR4679-1-201ENST00000637619 75 ntBASIC2.11□□□□□ -2.07
SYNE4Q8N205 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE4Q8N205 AL596028.1-201ENST00000326971 197 ntBASIC2.1□□□□□ -2.07
SYNE4Q8N205 RNU6-349P-201ENST00000362402 107 ntBASIC2.1□□□□□ -2.07
SYNE4Q8N205 SNORD115-28-201ENST00000363931 81 ntBASIC2.1□□□□□ -2.07
SYNE4Q8N205 SNORD14E-201ENST00000364009 85 ntBASIC2.1□□□□□ -2.07
SYNE4Q8N205 SNORA2.2-201ENST00000365473 135 ntBASIC2.1□□□□□ -2.07
SYNE4Q8N205 RNU6-442P-201ENST00000383968 104 ntBASIC2.1□□□□□ -2.07
SYNE4Q8N205 RNU6-440P-201ENST00000390882 105 ntBASIC2.1□□□□□ -2.07
SYNE4Q8N205 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.1□□□□□ -2.07
SYNE4Q8N205 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.1□□□□□ -2.07
SYNE4Q8N205 RNU7-94P-201ENST00000459576 63 ntBASIC2.1□□□□□ -2.07
SYNE4Q8N205 AC055731.1-201ENST00000474387 401 ntBASIC2.1□□□□□ -2.07
SYNE4Q8N205 AC114811.1-201ENST00000507207 168 ntBASIC2.1□□□□□ -2.07
SYNE4Q8N205 RNU2-19P-201ENST00000517288 84 ntBASIC2.1□□□□□ -2.07
SYNE4Q8N205 MIR4529-201ENST00000578110 78 ntBASIC2.1□□□□□ -2.07
SYNE4Q8N205 AC078899.2-201ENST00000595282 212 ntBASIC2.1□□□□□ -2.07
SYNE4Q8N205 AC015726.2-201ENST00000620112 122 ntBASIC2.1□□□□□ -2.07
SYNE4Q8N205 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.1□□□□□ -2.07
SYNE4Q8N205 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE4Q8N205 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE4Q8N205 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SYNE4Q8N205 Y_RNA.43-201ENST00000362670 111 ntBASIC2.09□□□□□ -2.07
SYNE4Q8N205 SNORA16B-201ENST00000364674 135 ntBASIC2.09□□□□□ -2.07
SYNE4Q8N205 Y_RNA.265-201ENST00000364677 108 ntBASIC2.09□□□□□ -2.07
SYNE4Q8N205 RNU6-392P-201ENST00000364926 101 ntBASIC2.09□□□□□ -2.07
SYNE4Q8N205 SNORD48-201ENST00000364953 64 ntBASIC2.09□□□□□ -2.07
SYNE4Q8N205 snoU2-30.1-201ENST00000365012 70 ntBASIC2.09□□□□□ -2.07
SYNE4Q8N205 RNU6-1189P-201ENST00000383958 107 ntBASIC2.09□□□□□ -2.07
SYNE4Q8N205 Y_RNA.440-201ENST00000384120 114 ntBASIC2.09□□□□□ -2.07
SYNE4Q8N205 Y_RNA.494-201ENST00000384432 111 ntBASIC2.09□□□□□ -2.07
SYNE4Q8N205 MIR802-201ENST00000390235 94 ntBASIC2.09□□□□□ -2.07
SYNE4Q8N205 RNA5SP489-201ENST00000410986 109 ntBASIC2.09□□□□□ -2.07
SYNE4Q8N205 RNY4P20-201ENST00000516678 93 ntBASIC2.09□□□□□ -2.07
SYNE4Q8N205 AC007012.1-201ENST00000567192 175 ntBASIC2.09□□□□□ -2.07
SYNE4Q8N205 AC134878.1-201ENST00000619901 243 ntBASIC2.09□□□□□ -2.07
SYNE4Q8N205 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SYNE4Q8N205 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SYNE4Q8N205 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
SYNE4Q8N205 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.08□□□□□ -2.08
SYNE4Q8N205 RNU6-1255P-201ENST00000363434 112 ntBASIC2.08□□□□□ -2.08
SYNE4Q8N205 RNA5SP37-201ENST00000365420 130 ntBASIC2.08□□□□□ -2.08
SYNE4Q8N205 RNU11-5P-201ENST00000391216 129 ntBASIC2.08□□□□□ -2.08
SYNE4Q8N205 RPS26P48-201ENST00000491713 339 ntBASIC2.08□□□□□ -2.08
SYNE4Q8N205 RNA5SP220-201ENST00000516298 104 ntBASIC2.08□□□□□ -2.08
SYNE4Q8N205 MIR514B-201ENST00000516774 80 ntBASIC2.08□□□□□ -2.08
SYNE4Q8N205 AC022523.2-201ENST00000561045 150 ntBASIC2.08□□□□□ -2.08
SYNE4Q8N205 SUB1P4-201ENST00000566062 339 ntBASIC2.08□□□□□ -2.08
SYNE4Q8N205 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.08□□□□□ -2.08
SYNE4Q8N205 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.08□□□□□ -2.08
SYNE4Q8N205 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
SYNE4Q8N205 RNU6-1019P-201ENST00000364424 107 ntBASIC2.07□□□□□ -2.08
SYNE4Q8N205 Y_RNA.281-201ENST00000364774 94 ntBASIC2.07□□□□□ -2.08
SYNE4Q8N205 RNU6-1104P-201ENST00000384723 104 ntBASIC2.07□□□□□ -2.08
SYNE4Q8N205 MIR570-201ENST00000384917 97 ntBASIC2.07□□□□□ -2.08
SYNE4Q8N205 RNA5SP482-201ENST00000391269 118 ntBASIC2.07□□□□□ -2.08
SYNE4Q8N205 RNU6-830P-201ENST00000516353 107 ntBASIC2.07□□□□□ -2.08
SYNE4Q8N205 Y_RNA.714-201ENST00000517065 90 ntBASIC2.07□□□□□ -2.08
SYNE4Q8N205 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.07□□□□□ -2.08
SYNE4Q8N205 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE4Q8N205 RNU1-42P-201ENST00000364033 160 ntBASIC2.06□□□□□ -2.08
SYNE4Q8N205 RNU4-16P-201ENST00000364737 141 ntBASIC2.06□□□□□ -2.08
SYNE4Q8N205 RNU6-1107P-201ENST00000364817 104 ntBASIC2.06□□□□□ -2.08
SYNE4Q8N205 RNU6-690P-201ENST00000365242 106 ntBASIC2.06□□□□□ -2.08
SYNE4Q8N205 Y_RNA.410-201ENST00000383992 113 ntBASIC2.06□□□□□ -2.08
SYNE4Q8N205 Y_RNA.495-201ENST00000384435 112 ntBASIC2.06□□□□□ -2.08
SYNE4Q8N205 SNORD12C-201ENST00000386307 89 ntBASIC2.06□□□□□ -2.08
SYNE4Q8N205 U8.16-201ENST00000391279 133 ntBASIC2.06□□□□□ -2.08
SYNE4Q8N205 HMGN2P38-201ENST00000423806 265 ntBASIC2.06□□□□□ -2.08
SYNE4Q8N205 AC009474.2-201ENST00000451383 136 ntBASIC2.06□□□□□ -2.08
SYNE4Q8N205 RNU6-113P-201ENST00000516653 101 ntBASIC2.06□□□□□ -2.08
SYNE4Q8N205 AP003484.1-201ENST00000530974 250 ntBASIC2.06□□□□□ -2.08
SYNE4Q8N205 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE4Q8N205 Y_RNA.85-201ENST00000363014 111 ntBASIC2.05□□□□□ -2.08
SYNE4Q8N205 HMGN2P19-201ENST00000425149 265 ntBASIC2.05□□□□□ -2.08
SYNE4Q8N205 COX6CP6-201ENST00000490840 228 ntBASIC2.05□□□□□ -2.08
SYNE4Q8N205 AC091932.4-201ENST00000623386 200 ntBASIC2.05□□□□□ -2.08
SYNE4Q8N205 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE4Q8N205 RNU6-112P-201ENST00000363599 104 ntBASIC2.04□□□□□ -2.08
SYNE4Q8N205 SNORA63D-201ENST00000364359 132 ntBASIC2.04□□□□□ -2.08
SYNE4Q8N205 RNU6-60P-201ENST00000364792 103 ntBASIC2.04□□□□□ -2.08
SYNE4Q8N205 Y_RNA.336-201ENST00000365307 109 ntBASIC2.04□□□□□ -2.08
SYNE4Q8N205 RNU6-163P-201ENST00000384396 106 ntBASIC2.04□□□□□ -2.08
SYNE4Q8N205 SNORA51.10-201ENST00000384418 136 ntBASIC2.04□□□□□ -2.08
SYNE4Q8N205 RNU6-296P-201ENST00000384608 107 ntBASIC2.04□□□□□ -2.08
SYNE4Q8N205 SUMO2P12-201ENST00000405924 140 ntBASIC2.04□□□□□ -2.08
SYNE4Q8N205 MIR1323-201ENST00000408090 73 ntBASIC2.04□□□□□ -2.08
SYNE4Q8N205 RNA5SP136-201ENST00000410906 107 ntBASIC2.04□□□□□ -2.08
SYNE4Q8N205 AL031737.1-201ENST00000450125 223 ntBASIC2.04□□□□□ -2.08
SYNE4Q8N205 RNU7-123P-201ENST00000515911 60 ntBASIC2.04□□□□□ -2.08
SYNE4Q8N205 RNU2-35P-201ENST00000516446 142 ntBASIC2.04□□□□□ -2.08
SYNE4Q8N205 RNA5SP102-201ENST00000516865 106 ntBASIC2.04□□□□□ -2.08
SYNE4Q8N205 RNA5SP437-201ENST00000517249 129 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms