Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC103810.9-201ENST00000606688 112 ntBASIC0.95□□□□□ -2.26
LDB1Q86U70 AC062037.2-201ENST00000610137 73 ntBASIC0.95□□□□□ -2.26
LDB1Q86U70 AC106800.4-201ENST00000614905 153 ntBASIC0.95□□□□□ -2.26
LDB1Q86U70 Y_RNA.20-201ENST00000362479 113 ntBASIC0.94□□□□□ -2.26
LDB1Q86U70 RNU6-728P-201ENST00000365375 104 ntBASIC0.94□□□□□ -2.26
LDB1Q86U70 Y_RNA.478-201ENST00000384358 107 ntBASIC0.94□□□□□ -2.26
LDB1Q86U70 SNORD111-201ENST00000408139 94 ntBASIC0.94□□□□□ -2.26
LDB1Q86U70 MIR1276-201ENST00000408707 83 ntBASIC0.94□□□□□ -2.26
LDB1Q86U70 PDCD5P2-201ENST00000507570 312 ntBASIC0.94□□□□□ -2.26
LDB1Q86U70 SNORA18.4-201ENST00000516440 124 ntBASIC0.94□□□□□ -2.26
LDB1Q86U70 AC036111.3-201ENST00000526389 112 ntBASIC0.94□□□□□ -2.26
LDB1Q86U70 RNU6-654P-201ENST00000364373 107 ntBASIC0.93□□□□□ -2.26
LDB1Q86U70 SNORD113.3-201ENST00000364630 78 ntBASIC0.93□□□□□ -2.26
LDB1Q86U70 RNY4P28-201ENST00000365281 93 ntBASIC0.93□□□□□ -2.26
LDB1Q86U70 Y_RNA.410-201ENST00000383992 113 ntBASIC0.93□□□□□ -2.26
LDB1Q86U70 RNU6-574P-201ENST00000384265 107 ntBASIC0.93□□□□□ -2.26
LDB1Q86U70 RNU6-196P-201ENST00000384315 107 ntBASIC0.93□□□□□ -2.26
LDB1Q86U70 SNORA27-201ENST00000384323 126 ntBASIC0.93□□□□□ -2.26
LDB1Q86U70 SNORD58.1-201ENST00000391313 66 ntBASIC0.93□□□□□ -2.26
LDB1Q86U70 SNORA79-201ENST00000408376 140 ntBASIC0.93□□□□□ -2.26
LDB1Q86U70 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.93□□□□□ -2.26
LDB1Q86U70 RNU6-197P-201ENST00000516680 100 ntBASIC0.93□□□□□ -2.26
LDB1Q86U70 RNU6-958P-201ENST00000516995 106 ntBASIC0.93□□□□□ -2.26
LDB1Q86U70 Y_RNA.65-201ENST00000362846 100 ntBASIC0.92□□□□□ -2.26
LDB1Q86U70 RNU6-702P-201ENST00000364982 107 ntBASIC0.92□□□□□ -2.26
LDB1Q86U70 RNA5SP247-201ENST00000411181 105 ntBASIC0.92□□□□□ -2.26
LDB1Q86U70 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.92□□□□□ -2.26
LDB1Q86U70 POLR2J4-204ENST00000418424 324 ntBASIC0.92□□□□□ -2.26
LDB1Q86U70 AF228730.3-201ENST00000436691 102 ntBASIC0.92□□□□□ -2.26
LDB1Q86U70 RPS29P24-201ENST00000486345 171 ntBASIC0.92□□□□□ -2.26
LDB1Q86U70 Y_RNA.673-201ENST00000516306 88 ntBASIC0.92□□□□□ -2.26
LDB1Q86U70 SNORD36C-201ENST00000516733 66 ntBASIC0.92□□□□□ -2.26
LDB1Q86U70 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.92□□□□□ -2.26
LDB1Q86U70 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
LDB1Q86U70 MIR96-201ENST00000362288 78 ntBASIC0.91□□□□□ -2.26
LDB1Q86U70 Y_RNA.269-201ENST00000364685 89 ntBASIC0.91□□□□□ -2.26
LDB1Q86U70 Y_RNA.308-201ENST00000365043 101 ntBASIC0.91□□□□□ -2.26
LDB1Q86U70 SNORA2B-201ENST00000384583 137 ntBASIC0.91□□□□□ -2.26
LDB1Q86U70 Y_RNA.539-201ENST00000384635 107 ntBASIC0.91□□□□□ -2.26
LDB1Q86U70 MIR499A-201ENST00000384903 122 ntBASIC0.91□□□□□ -2.26
LDB1Q86U70 MT-TN-201ENST00000387400 73 ntBASIC0.91□□□□□ -2.26
LDB1Q86U70 RNU7-73P-201ENST00000458743 63 ntBASIC0.91□□□□□ -2.26
LDB1Q86U70 MTND1P19-201ENST00000511780 315 ntBASIC0.91□□□□□ -2.26
LDB1Q86U70 RNU7-53P-201ENST00000516705 60 ntBASIC0.91□□□□□ -2.26
LDB1Q86U70 MIR4698-201ENST00000577795 80 ntBASIC0.91□□□□□ -2.26
LDB1Q86U70 MIR4744-201ENST00000581563 82 ntBASIC0.91□□□□□ -2.26
LDB1Q86U70 MIR4503-201ENST00000582187 83 ntBASIC0.91□□□□□ -2.26
LDB1Q86U70 AL020996.3-201ENST00000606617 222 ntBASIC0.91□□□□□ -2.26
LDB1Q86U70 MIR6504-201ENST00000613520 61 ntBASIC0.91□□□□□ -2.26
LDB1Q86U70 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.91□□□□□ -2.26
LDB1Q86U70 Y_RNA.168-201ENST00000363740 102 ntBASIC0.9□□□□□ -2.27
LDB1Q86U70 Y_RNA.193-201ENST00000363979 102 ntBASIC0.9□□□□□ -2.27
LDB1Q86U70 RNU6-1189P-201ENST00000383958 107 ntBASIC0.9□□□□□ -2.27
LDB1Q86U70 RNU4-43P-201ENST00000410628 137 ntBASIC0.9□□□□□ -2.27
LDB1Q86U70 RNU6-1023P-201ENST00000516137 106 ntBASIC0.9□□□□□ -2.27
LDB1Q86U70 RNU6-561P-201ENST00000516222 102 ntBASIC0.9□□□□□ -2.27
LDB1Q86U70 RNY3P16-201ENST00000516338 101 ntBASIC0.9□□□□□ -2.27
LDB1Q86U70 RNA5SP255-201ENST00000516370 107 ntBASIC0.9□□□□□ -2.27
LDB1Q86U70 MIR3128-201ENST00000581957 66 ntBASIC0.9□□□□□ -2.27
LDB1Q86U70 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.9□□□□□ -2.27
LDB1Q86U70 AP000753.3-201ENST00000604083 169 ntBASIC0.9□□□□□ -2.27
LDB1Q86U70 MIR377-201ENST00000362145 69 ntBASIC0.89□□□□□ -2.27
LDB1Q86U70 Y_RNA.226-201ENST00000364337 114 ntBASIC0.89□□□□□ -2.27
LDB1Q86U70 RNU1-36P-201ENST00000365130 165 ntBASIC0.89□□□□□ -2.27
LDB1Q86U70 Y_RNA.452-201ENST00000384202 108 ntBASIC0.89□□□□□ -2.27
LDB1Q86U70 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
LDB1Q86U70 RNA5SP95-201ENST00000410319 137 ntBASIC0.89□□□□□ -2.27
LDB1Q86U70 RNU6-994P-201ENST00000410507 111 ntBASIC0.89□□□□□ -2.27
LDB1Q86U70 AL035398.1-201ENST00000430869 322 ntBASIC0.89□□□□□ -2.27
LDB1Q86U70 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.89□□□□□ -2.27
LDB1Q86U70 AC067940.1-201ENST00000458411 300 ntBASIC0.89□□□□□ -2.27
LDB1Q86U70 RNU7-96P-201ENST00000459535 64 ntBASIC0.89□□□□□ -2.27
LDB1Q86U70 RNU4-71P-201ENST00000516258 113 ntBASIC0.89□□□□□ -2.27
LDB1Q86U70 MIR3973-201ENST00000579824 107 ntBASIC0.89□□□□□ -2.27
LDB1Q86U70 MIR6767-201ENST00000637302 66 ntBASIC0.89□□□□□ -2.27
LDB1Q86U70 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
LDB1Q86U70 Y_RNA.7-201ENST00000362352 102 ntBASIC0.88□□□□□ -2.27
LDB1Q86U70 Y_RNA.23-201ENST00000362496 106 ntBASIC0.88□□□□□ -2.27
LDB1Q86U70 RNU1-93P-201ENST00000364704 169 ntBASIC0.88□□□□□ -2.27
LDB1Q86U70 SNORA20.1-201ENST00000364790 130 ntBASIC0.88□□□□□ -2.27
LDB1Q86U70 RNU6-493P-201ENST00000391321 108 ntBASIC0.88□□□□□ -2.27
LDB1Q86U70 MIR1287-201ENST00000408492 90 ntBASIC0.88□□□□□ -2.27
LDB1Q86U70 Y_RNA.626-201ENST00000411288 95 ntBASIC0.88□□□□□ -2.27
LDB1Q86U70 RPS3AP1-201ENST00000413190 320 ntBASIC0.88□□□□□ -2.27
LDB1Q86U70 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.88□□□□□ -2.27
LDB1Q86U70 AL121914.1-201ENST00000450188 156 ntBASIC0.88□□□□□ -2.27
LDB1Q86U70 U7.7-201ENST00000459276 60 ntBASIC0.88□□□□□ -2.27
LDB1Q86U70 RNU6-113P-201ENST00000516653 101 ntBASIC0.88□□□□□ -2.27
LDB1Q86U70 MIR3149-201ENST00000584629 83 ntBASIC0.88□□□□□ -2.27
LDB1Q86U70 RNU6-94P-201ENST00000607728 107 ntBASIC0.88□□□□□ -2.27
LDB1Q86U70 7SK.10-201ENST00000621414 298 ntBASIC0.88□□□□□ -2.27
LDB1Q86U70 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
LDB1Q86U70 Y_RNA.121-201ENST00000363309 113 ntBASIC0.87□□□□□ -2.27
LDB1Q86U70 Y_RNA.191-201ENST00000363972 113 ntBASIC0.87□□□□□ -2.27
LDB1Q86U70 SNORA1-201ENST00000384107 130 ntBASIC0.87□□□□□ -2.27
LDB1Q86U70 Y_RNA.440-201ENST00000384120 114 ntBASIC0.87□□□□□ -2.27
LDB1Q86U70 RNU6-463P-201ENST00000384340 107 ntBASIC0.87□□□□□ -2.27
LDB1Q86U70 RNU6-125P-201ENST00000384505 107 ntBASIC0.87□□□□□ -2.27
LDB1Q86U70 Y_RNA.542-201ENST00000384641 111 ntBASIC0.87□□□□□ -2.27
LDB1Q86U70 RNU6-578P-201ENST00000390980 103 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 326.8 ms