Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
RNF111Q6ZNA4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
RNF111Q6ZNA4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RNF111Q6ZNA4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RNF111Q6ZNA4 MIR449A-201ENST00000362113 91 ntBASIC2.26□□□□□ -2.05
RNF111Q6ZNA4 SNORA22.1-201ENST00000362701 134 ntBASIC2.26□□□□□ -2.05
RNF111Q6ZNA4 RNA5SP393-201ENST00000363423 117 ntBASIC2.26□□□□□ -2.05
RNF111Q6ZNA4 RNU6-457P-201ENST00000363999 107 ntBASIC2.26□□□□□ -2.05
RNF111Q6ZNA4 SNORA3A-201ENST00000364113 130 ntBASIC2.26□□□□□ -2.05
RNF111Q6ZNA4 Y_RNA.507-201ENST00000384500 99 ntBASIC2.26□□□□□ -2.05
RNF111Q6ZNA4 RNU6-913P-201ENST00000390913 95 ntBASIC2.26□□□□□ -2.05
RNF111Q6ZNA4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.26□□□□□ -2.05
RNF111Q6ZNA4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.26□□□□□ -2.05
RNF111Q6ZNA4 AL513328.1-201ENST00000446460 224 ntBASIC2.26□□□□□ -2.05
RNF111Q6ZNA4 RNA5SP24-201ENST00000516478 95 ntBASIC2.26□□□□□ -2.05
RNF111Q6ZNA4 MIR3152-201ENST00000579801 74 ntBASIC2.26□□□□□ -2.05
RNF111Q6ZNA4 FAM106DP-201ENST00000586416 501 ntBASIC2.26□□□□□ -2.05
RNF111Q6ZNA4 U1.36-201ENST00000620684 176 ntBASIC2.26□□□□□ -2.05
RNF111Q6ZNA4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
RNF111Q6ZNA4 MIR424-201ENST00000362227 98 ntBASIC2.25□□□□□ -2.05
RNF111Q6ZNA4 RNU6-661P-201ENST00000362409 107 ntBASIC2.25□□□□□ -2.05
RNF111Q6ZNA4 Y_RNA.155-201ENST00000363632 101 ntBASIC2.25□□□□□ -2.05
RNF111Q6ZNA4 SNORD114-30-201ENST00000364448 72 ntBASIC2.25□□□□□ -2.05
RNF111Q6ZNA4 Y_RNA.470-201ENST00000384307 117 ntBASIC2.25□□□□□ -2.05
RNF111Q6ZNA4 RNA5SP338-201ENST00000410495 85 ntBASIC2.25□□□□□ -2.05
RNF111Q6ZNA4 RNU4-69P-201ENST00000410677 143 ntBASIC2.25□□□□□ -2.05
RNF111Q6ZNA4 RNA5SP100-201ENST00000410903 110 ntBASIC2.25□□□□□ -2.05
RNF111Q6ZNA4 RNA5SP59-201ENST00000410922 110 ntBASIC2.25□□□□□ -2.05
RNF111Q6ZNA4 RNA5SP450-201ENST00000411206 102 ntBASIC2.25□□□□□ -2.05
RNF111Q6ZNA4 RNU2-13P-201ENST00000515909 113 ntBASIC2.25□□□□□ -2.05
RNF111Q6ZNA4 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.25□□□□□ -2.05
RNF111Q6ZNA4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.25□□□□□ -2.05
RNF111Q6ZNA4 DEFB131E-201ENST00000532329 154 ntBASIC2.25□□□□□ -2.05
RNF111Q6ZNA4 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.25□□□□□ -2.05
RNF111Q6ZNA4 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.25□□□□□ -2.05
RNF111Q6ZNA4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
RNF111Q6ZNA4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
RNF111Q6ZNA4 SNORD73B-201ENST00000364394 72 ntBASIC2.24□□□□□ -2.05
RNF111Q6ZNA4 RNU6-893P-201ENST00000458841 100 ntBASIC2.24□□□□□ -2.05
RNF111Q6ZNA4 AC234781.5-201ENST00000508429 271 ntBASIC2.24□□□□□ -2.05
RNF111Q6ZNA4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.24□□□□□ -2.05
RNF111Q6ZNA4 RNA5SP33-201ENST00000516687 98 ntBASIC2.24□□□□□ -2.05
RNF111Q6ZNA4 RNU7-193P-201ENST00000516723 65 ntBASIC2.24□□□□□ -2.05
RNF111Q6ZNA4 SNORA31.17-201ENST00000516953 127 ntBASIC2.24□□□□□ -2.05
RNF111Q6ZNA4 AC121758.2-201ENST00000553271 193 ntBASIC2.24□□□□□ -2.05
RNF111Q6ZNA4 MIR6717-201ENST00000622747 73 ntBASIC2.24□□□□□ -2.05
RNF111Q6ZNA4 AC064859.1-201ENST00000624741 174 ntBASIC2.24□□□□□ -2.05
RNF111Q6ZNA4 MIR1291-201ENST00000627649 87 ntBASIC2.24□□□□□ -2.05
RNF111Q6ZNA4 MIR6841-201ENST00000637129 72 ntBASIC2.24□□□□□ -2.05
RNF111Q6ZNA4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RNF111Q6ZNA4 RNU4-82P-201ENST00000362443 140 ntBASIC2.23□□□□□ -2.05
RNF111Q6ZNA4 SNORD115-19-201ENST00000363098 82 ntBASIC2.23□□□□□ -2.05
RNF111Q6ZNA4 SNORD115-18-201ENST00000363293 82 ntBASIC2.23□□□□□ -2.05
RNF111Q6ZNA4 RNU4-36P-201ENST00000364294 144 ntBASIC2.23□□□□□ -2.05
RNF111Q6ZNA4 SNORD115-17-201ENST00000364612 82 ntBASIC2.23□□□□□ -2.05
RNF111Q6ZNA4 Y_RNA.299-201ENST00000364973 94 ntBASIC2.23□□□□□ -2.05
RNF111Q6ZNA4 SNORA24-201ENST00000384096 131 ntBASIC2.23□□□□□ -2.05
RNF111Q6ZNA4 RNY1P7-201ENST00000384743 110 ntBASIC2.23□□□□□ -2.05
RNF111Q6ZNA4 SNORA26.6-201ENST00000391256 115 ntBASIC2.23□□□□□ -2.05
RNF111Q6ZNA4 RPS3AP1-201ENST00000413190 320 ntBASIC2.23□□□□□ -2.05
RNF111Q6ZNA4 MTATP8P2-201ENST00000435212 202 ntBASIC2.23□□□□□ -2.05
RNF111Q6ZNA4 SNORA31.25-201ENST00000517242 134 ntBASIC2.23□□□□□ -2.05
RNF111Q6ZNA4 DNAJC19P9-201ENST00000555084 351 ntBASIC2.23□□□□□ -2.05
RNF111Q6ZNA4 MIR548AE2-201ENST00000583456 67 ntBASIC2.23□□□□□ -2.05
RNF111Q6ZNA4 AL020996.3-201ENST00000606617 222 ntBASIC2.23□□□□□ -2.05
RNF111Q6ZNA4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.22□□□□□ -2.05
RNF111Q6ZNA4 RNY3P2-201ENST00000362918 102 ntBASIC2.22□□□□□ -2.05
RNF111Q6ZNA4 RNU4-67P-201ENST00000364569 141 ntBASIC2.22□□□□□ -2.05
RNF111Q6ZNA4 RNA5SP261-201ENST00000410536 106 ntBASIC2.22□□□□□ -2.05
RNF111Q6ZNA4 HMGN1P33-201ENST00000432945 451 ntBASIC2.22□□□□□ -2.05
RNF111Q6ZNA4 RPL23AP6-201ENST00000446637 472 ntBASIC2.22□□□□□ -2.05
RNF111Q6ZNA4 RNU7-73P-201ENST00000458743 63 ntBASIC2.22□□□□□ -2.05
RNF111Q6ZNA4 AC026436.1-201ENST00000510537 270 ntBASIC2.22□□□□□ -2.05
RNF111Q6ZNA4 AC016717.2-201ENST00000609089 5141 ntBASIC2.22□□□□□ -2.05
RNF111Q6ZNA4 SNORD115-2-201ENST00000362842 82 ntBASIC2.21□□□□□ -2.06
RNF111Q6ZNA4 RNU6-363P-201ENST00000362895 105 ntBASIC2.21□□□□□ -2.06
RNF111Q6ZNA4 Y_RNA.107-201ENST00000363190 121 ntBASIC2.21□□□□□ -2.06
RNF111Q6ZNA4 RNU6-1099P-201ENST00000363533 107 ntBASIC2.21□□□□□ -2.06
RNF111Q6ZNA4 SNORD115-20-201ENST00000365099 82 ntBASIC2.21□□□□□ -2.06
RNF111Q6ZNA4 RNU6-409P-201ENST00000384114 104 ntBASIC2.21□□□□□ -2.06
RNF111Q6ZNA4 RNU1-52P-201ENST00000384190 164 ntBASIC2.21□□□□□ -2.06
RNF111Q6ZNA4 RNU6-616P-201ENST00000384353 107 ntBASIC2.21□□□□□ -2.06
RNF111Q6ZNA4 SNORA7.5-201ENST00000410672 110 ntBASIC2.21□□□□□ -2.06
RNF111Q6ZNA4 RNU6-733P-201ENST00000410759 104 ntBASIC2.21□□□□□ -2.06
RNF111Q6ZNA4 RNA5SP57-201ENST00000459463 123 ntBASIC2.21□□□□□ -2.06
RNF111Q6ZNA4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.21□□□□□ -2.06
RNF111Q6ZNA4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.21□□□□□ -2.06
RNF111Q6ZNA4 MIR4529-201ENST00000578110 78 ntBASIC2.21□□□□□ -2.06
RNF111Q6ZNA4 MIR5002-201ENST00000584713 97 ntBASIC2.21□□□□□ -2.06
RNF111Q6ZNA4 FAM71BP1-201ENST00000604431 523 ntBASIC2.21□□□□□ -2.06
RNF111Q6ZNA4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.2□□□□□ -2.06
RNF111Q6ZNA4 Y_RNA.360-201ENST00000365512 102 ntBASIC2.2□□□□□ -2.06
RNF111Q6ZNA4 SNORA32-201ENST00000384072 121 ntBASIC2.2□□□□□ -2.06
RNF111Q6ZNA4 MIR605-201ENST00000385078 83 ntBASIC2.2□□□□□ -2.06
RNF111Q6ZNA4 SCARNA23-201ENST00000516060 130 ntBASIC2.2□□□□□ -2.06
RNF111Q6ZNA4 SNORA74.3-201ENST00000517108 154 ntBASIC2.2□□□□□ -2.06
RNF111Q6ZNA4 MIR5194-201ENST00000582634 120 ntBASIC2.2□□□□□ -2.06
RNF111Q6ZNA4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
RNF111Q6ZNA4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.19□□□□□ -2.06
RNF111Q6ZNA4 Y_RNA.93-201ENST00000363066 109 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 208 ms