Protein–RNA interactions for Protein: Q6P1Q0

LETMD1, LETM1 domain-containing protein 1, humanhuman

Predictions only

Length 360 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1Q6P1Q0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LETMD1Q6P1Q0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
LETMD1Q6P1Q0 RNY3P2-201ENST00000362918 102 ntBASIC2.33□□□□□ -2.04
LETMD1Q6P1Q0 Y_RNA.107-201ENST00000363190 121 ntBASIC2.33□□□□□ -2.04
LETMD1Q6P1Q0 RNU6-1099P-201ENST00000363533 107 ntBASIC2.33□□□□□ -2.04
LETMD1Q6P1Q0 SNORA3A-201ENST00000364113 130 ntBASIC2.33□□□□□ -2.04
LETMD1Q6P1Q0 RNU4-67P-201ENST00000364569 141 ntBASIC2.33□□□□□ -2.04
LETMD1Q6P1Q0 Y_RNA.470-201ENST00000384307 117 ntBASIC2.33□□□□□ -2.04
LETMD1Q6P1Q0 Y_RNA.558-201ENST00000384685 113 ntBASIC2.33□□□□□ -2.04
LETMD1Q6P1Q0 AL359511.1-201ENST00000402970 211 ntBASIC2.33□□□□□ -2.04
LETMD1Q6P1Q0 SCARNA23-201ENST00000516060 130 ntBASIC2.33□□□□□ -2.04
LETMD1Q6P1Q0 RNA5SP33-201ENST00000516687 98 ntBASIC2.33□□□□□ -2.04
LETMD1Q6P1Q0 MIR548AE2-201ENST00000583456 67 ntBASIC2.33□□□□□ -2.04
LETMD1Q6P1Q0 FAM106DP-201ENST00000586416 501 ntBASIC2.33□□□□□ -2.04
LETMD1Q6P1Q0 AL020996.3-201ENST00000606617 222 ntBASIC2.33□□□□□ -2.04
LETMD1Q6P1Q0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
LETMD1Q6P1Q0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
LETMD1Q6P1Q0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LETMD1Q6P1Q0 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LETMD1Q6P1Q0 RNU6-457P-201ENST00000363999 107 ntBASIC2.32□□□□□ -2.04
LETMD1Q6P1Q0 Y_RNA.220-201ENST00000364244 109 ntBASIC2.32□□□□□ -2.04
LETMD1Q6P1Q0 Y_RNA.430-201ENST00000384081 110 ntBASIC2.32□□□□□ -2.04
LETMD1Q6P1Q0 RNU6-409P-201ENST00000384114 104 ntBASIC2.32□□□□□ -2.04
LETMD1Q6P1Q0 Y_RNA.537-201ENST00000384626 109 ntBASIC2.32□□□□□ -2.04
LETMD1Q6P1Q0 RNY1P7-201ENST00000384743 110 ntBASIC2.32□□□□□ -2.04
LETMD1Q6P1Q0 RNU6-733P-201ENST00000410759 104 ntBASIC2.32□□□□□ -2.04
LETMD1Q6P1Q0 RPS3AP1-201ENST00000413190 320 ntBASIC2.32□□□□□ -2.04
LETMD1Q6P1Q0 SNORA31.25-201ENST00000517242 134 ntBASIC2.32□□□□□ -2.04
LETMD1Q6P1Q0 FAM71BP1-201ENST00000604431 523 ntBASIC2.32□□□□□ -2.04
LETMD1Q6P1Q0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LETMD1Q6P1Q0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
LETMD1Q6P1Q0 Y_RNA.360-201ENST00000365512 102 ntBASIC2.31□□□□□ -2.04
LETMD1Q6P1Q0 RNU1-52P-201ENST00000384190 164 ntBASIC2.31□□□□□ -2.04
LETMD1Q6P1Q0 MIR196B-201ENST00000384852 84 ntBASIC2.31□□□□□ -2.04
LETMD1Q6P1Q0 SNORD77B-201ENST00000391112 67 ntBASIC2.31□□□□□ -2.04
LETMD1Q6P1Q0 NDUFB4P4-201ENST00000404822 243 ntBASIC2.31□□□□□ -2.04
LETMD1Q6P1Q0 RPL23AP6-201ENST00000446637 472 ntBASIC2.31□□□□□ -2.04
LETMD1Q6P1Q0 SNORA31.17-201ENST00000516953 127 ntBASIC2.31□□□□□ -2.04
LETMD1Q6P1Q0 MIR4529-201ENST00000578110 78 ntBASIC2.31□□□□□ -2.04
LETMD1Q6P1Q0 MIR4694-201ENST00000578534 80 ntBASIC2.31□□□□□ -2.04
LETMD1Q6P1Q0 MIR6895-201ENST00000613497 78 ntBASIC2.31□□□□□ -2.04
LETMD1Q6P1Q0 MIR6817-201ENST00000615588 66 ntBASIC2.31□□□□□ -2.04
LETMD1Q6P1Q0 MALAT1.1-201ENST00000618249 95 ntBASIC2.31□□□□□ -2.04
LETMD1Q6P1Q0 MIR1291-201ENST00000627649 87 ntBASIC2.31□□□□□ -2.04
LETMD1Q6P1Q0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.31□□□□□ -2.04
LETMD1Q6P1Q0 AC016717.2-201ENST00000609089 5141 ntBASIC2.3□□□□□ -2.04
LETMD1Q6P1Q0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.3□□□□□ -2.04
LETMD1Q6P1Q0 SNORA67.1-201ENST00000364749 141 ntBASIC2.3□□□□□ -2.04
LETMD1Q6P1Q0 RNU6-1067P-201ENST00000384752 107 ntBASIC2.3□□□□□ -2.04
LETMD1Q6P1Q0 MIR605-201ENST00000385078 83 ntBASIC2.3□□□□□ -2.04
LETMD1Q6P1Q0 MIR577-201ENST00000385196 96 ntBASIC2.3□□□□□ -2.04
LETMD1Q6P1Q0 Y_RNA.601-201ENST00000410500 113 ntBASIC2.3□□□□□ -2.04
LETMD1Q6P1Q0 RNA5SP184-201ENST00000411071 108 ntBASIC2.3□□□□□ -2.04
LETMD1Q6P1Q0 MIR1270-201ENST00000459320 83 ntBASIC2.3□□□□□ -2.04
LETMD1Q6P1Q0 RNA5SP148-201ENST00000516527 94 ntBASIC2.3□□□□□ -2.04
LETMD1Q6P1Q0 RNU7-193P-201ENST00000516723 65 ntBASIC2.3□□□□□ -2.04
LETMD1Q6P1Q0 RNU6-762P-201ENST00000517107 102 ntBASIC2.3□□□□□ -2.04
LETMD1Q6P1Q0 SNORA74.3-201ENST00000517108 154 ntBASIC2.3□□□□□ -2.04
LETMD1Q6P1Q0 AC121758.2-201ENST00000553271 193 ntBASIC2.3□□□□□ -2.04
LETMD1Q6P1Q0 MIR5694-201ENST00000581190 76 ntBASIC2.3□□□□□ -2.04
LETMD1Q6P1Q0 AL442128.1-201ENST00000615151 90 ntBASIC2.3□□□□□ -2.04
LETMD1Q6P1Q0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.3□□□□□ -2.04
LETMD1Q6P1Q0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LETMD1Q6P1Q0 Y_RNA.10-201ENST00000362371 110 ntBASIC2.29□□□□□ -2.04
LETMD1Q6P1Q0 RNU6-832P-201ENST00000363319 107 ntBASIC2.29□□□□□ -2.04
LETMD1Q6P1Q0 RNA5SP68-201ENST00000363885 119 ntBASIC2.29□□□□□ -2.04
LETMD1Q6P1Q0 Y_RNA.466-201ENST00000384294 113 ntBASIC2.29□□□□□ -2.04
LETMD1Q6P1Q0 RNU6-616P-201ENST00000384353 107 ntBASIC2.29□□□□□ -2.04
LETMD1Q6P1Q0 RNU6-360P-201ENST00000390944 104 ntBASIC2.29□□□□□ -2.04
LETMD1Q6P1Q0 AL353813.1-201ENST00000440700 253 ntBASIC2.29□□□□□ -2.04
LETMD1Q6P1Q0 RNA5SP57-201ENST00000459463 123 ntBASIC2.29□□□□□ -2.04
LETMD1Q6P1Q0 AC026436.1-201ENST00000510537 270 ntBASIC2.29□□□□□ -2.04
LETMD1Q6P1Q0 RNU6-844P-201ENST00000517175 102 ntBASIC2.29□□□□□ -2.04
LETMD1Q6P1Q0 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.29□□□□□ -2.04
LETMD1Q6P1Q0 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.29□□□□□ -2.04
LETMD1Q6P1Q0 AC080100.1-201ENST00000624239 5356 ntBASIC2.29□□□□□ -2.04
LETMD1Q6P1Q0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
LETMD1Q6P1Q0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
LETMD1Q6P1Q0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
LETMD1Q6P1Q0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LETMD1Q6P1Q0 Y_RNA.342-201ENST00000365352 113 ntBASIC2.28□□□□□ -2.04
LETMD1Q6P1Q0 SNORA7.5-201ENST00000410672 110 ntBASIC2.28□□□□□ -2.04
LETMD1Q6P1Q0 HMGN1P33-201ENST00000432945 451 ntBASIC2.28□□□□□ -2.04
LETMD1Q6P1Q0 snoU13.16-201ENST00000459350 104 ntBASIC2.28□□□□□ -2.04
LETMD1Q6P1Q0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.28□□□□□ -2.04
LETMD1Q6P1Q0 AC079804.2-201ENST00000490376 200 ntBASIC2.28□□□□□ -2.04
LETMD1Q6P1Q0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LETMD1Q6P1Q0 AL365361.1-201ENST00000566942 3481 ntBASIC2.27□□□□□ -2.05
LETMD1Q6P1Q0 SNORA26.2-201ENST00000390922 122 ntBASIC2.27□□□□□ -2.05
LETMD1Q6P1Q0 RNU6-679P-201ENST00000391003 106 ntBASIC2.27□□□□□ -2.05
LETMD1Q6P1Q0 RNY4P29-201ENST00000410801 97 ntBASIC2.27□□□□□ -2.05
LETMD1Q6P1Q0 AL513328.1-201ENST00000446460 224 ntBASIC2.27□□□□□ -2.05
LETMD1Q6P1Q0 AC005336.3-201ENST00000623833 2679 ntBASIC2.27□□□□□ -2.05
LETMD1Q6P1Q0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LETMD1Q6P1Q0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.26□□□□□ -2.05
LETMD1Q6P1Q0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.26□□□□□ -2.05
LETMD1Q6P1Q0 AP000648.3-201ENST00000623539 4507 ntBASIC2.26□□□□□ -2.05
LETMD1Q6P1Q0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.26□□□□□ -2.05
LETMD1Q6P1Q0 RNU6-1123P-201ENST00000362347 106 ntBASIC2.26□□□□□ -2.05
LETMD1Q6P1Q0 SNORD114-30-201ENST00000364448 72 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 215.7 ms