Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.74□□□□□ -2.13
MMP13P45452 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.74□□□□□ -2.13
MMP13P45452 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
MMP13P45452 MIR516B2-201ENST00000385190 85 ntBASIC1.73□□□□□ -2.13
MMP13P45452 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
MMP13P45452 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.73□□□□□ -2.13
MMP13P45452 RNU6-113P-201ENST00000516653 101 ntBASIC1.73□□□□□ -2.13
MMP13P45452 RNY4P20-201ENST00000516678 93 ntBASIC1.73□□□□□ -2.13
MMP13P45452 DEFB122-202ENST00000569013 197 ntBASIC1.73□□□□□ -2.13
MMP13P45452 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.73□□□□□ -2.13
MMP13P45452 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
MMP13P45452 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
MMP13P45452 RNU6-833P-201ENST00000363486 107 ntBASIC1.72□□□□□ -2.13
MMP13P45452 Y_RNA.242-201ENST00000364473 110 ntBASIC1.72□□□□□ -2.13
MMP13P45452 RNU4-16P-201ENST00000364737 141 ntBASIC1.72□□□□□ -2.13
MMP13P45452 Y_RNA.346-201ENST00000365385 112 ntBASIC1.72□□□□□ -2.13
MMP13P45452 AL627390.1-201ENST00000396055 340 ntBASIC1.72□□□□□ -2.13
MMP13P45452 RN7SKP200-201ENST00000410564 320 ntBASIC1.72□□□□□ -2.13
MMP13P45452 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.72□□□□□ -2.13
MMP13P45452 HMGN2P32-201ENST00000444648 269 ntBASIC1.72□□□□□ -2.13
MMP13P45452 RNU6-830P-201ENST00000516353 107 ntBASIC1.72□□□□□ -2.13
MMP13P45452 RNU2-35P-201ENST00000516446 142 ntBASIC1.72□□□□□ -2.13
MMP13P45452 MIR4298-201ENST00000584380 73 ntBASIC1.72□□□□□ -2.13
MMP13P45452 AC103810.8-201ENST00000607347 118 ntBASIC1.72□□□□□ -2.13
MMP13P45452 uc_338.28-201ENST00000612082 187 ntBASIC1.72□□□□□ -2.13
MMP13P45452 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.13
MMP13P45452 MIR450A1-201ENST00000362262 91 ntBASIC1.71□□□□□ -2.14
MMP13P45452 RNU6-690P-201ENST00000365242 106 ntBASIC1.71□□□□□ -2.14
MMP13P45452 Y_RNA.351-201ENST00000365436 96 ntBASIC1.71□□□□□ -2.14
MMP13P45452 RNU6-106P-201ENST00000384405 107 ntBASIC1.71□□□□□ -2.14
MMP13P45452 SNORD28B-201ENST00000390993 75 ntBASIC1.71□□□□□ -2.14
MMP13P45452 RNU7-45P-201ENST00000459460 63 ntBASIC1.71□□□□□ -2.14
MMP13P45452 RNU7-123P-201ENST00000515911 60 ntBASIC1.71□□□□□ -2.14
MMP13P45452 RNU7-12P-201ENST00000516030 62 ntBASIC1.71□□□□□ -2.14
MMP13P45452 SNORA25.15-201ENST00000516487 89 ntBASIC1.71□□□□□ -2.14
MMP13P45452 MIR4778-201ENST00000577635 80 ntBASIC1.71□□□□□ -2.14
MMP13P45452 MIR502-201ENST00000606349 86 ntBASIC1.71□□□□□ -2.14
MMP13P45452 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.71□□□□□ -2.14
MMP13P45452 SNORA28-201ENST00000606769 126 ntBASIC1.71□□□□□ -2.14
MMP13P45452 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
MMP13P45452 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
MMP13P45452 AL596211.1-201ENST00000569873 2277 ntBASIC1.7□□□□□ -2.14
MMP13P45452 MIR342-201ENST00000362212 99 ntBASIC1.7□□□□□ -2.14
MMP13P45452 RNY1P6-201ENST00000384193 109 ntBASIC1.7□□□□□ -2.14
MMP13P45452 RNU6-880P-201ENST00000384526 107 ntBASIC1.7□□□□□ -2.14
MMP13P45452 MIR520A-201ENST00000384862 85 ntBASIC1.7□□□□□ -2.14
MMP13P45452 MIR570-201ENST00000384917 97 ntBASIC1.7□□□□□ -2.14
MMP13P45452 MIR504-201ENST00000385065 83 ntBASIC1.7□□□□□ -2.14
MMP13P45452 AL034345.1-201ENST00000407768 123 ntBASIC1.7□□□□□ -2.14
MMP13P45452 SNX2P2-201ENST00000424553 323 ntBASIC1.7□□□□□ -2.14
MMP13P45452 AC087499.4-201ENST00000448505 178 ntBASIC1.7□□□□□ -2.14
MMP13P45452 COX6CP6-201ENST00000490840 228 ntBASIC1.7□□□□□ -2.14
MMP13P45452 SNORA18.7-201ENST00000516910 131 ntBASIC1.7□□□□□ -2.14
MMP13P45452 SNORA31.17-201ENST00000516953 127 ntBASIC1.7□□□□□ -2.14
MMP13P45452 SUMO2P16-201ENST00000519475 264 ntBASIC1.7□□□□□ -2.14
MMP13P45452 AC007012.1-201ENST00000567192 175 ntBASIC1.7□□□□□ -2.14
MMP13P45452 MIR3198-2-201ENST00000577868 80 ntBASIC1.7□□□□□ -2.14
MMP13P45452 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.7□□□□□ -2.14
MMP13P45452 Y_RNA.116-201ENST00000363292 103 ntBASIC1.69□□□□□ -2.14
MMP13P45452 Y_RNA.298-201ENST00000364960 107 ntBASIC1.69□□□□□ -2.14
MMP13P45452 RNU6-203P-201ENST00000384038 104 ntBASIC1.69□□□□□ -2.14
MMP13P45452 SNORA27-201ENST00000384323 126 ntBASIC1.69□□□□□ -2.14
MMP13P45452 U8.17-201ENST00000391292 132 ntBASIC1.69□□□□□ -2.14
MMP13P45452 RNU6-554P-201ENST00000410466 106 ntBASIC1.69□□□□□ -2.14
MMP13P45452 AC090821.2-201ENST00000523552 176 ntBASIC1.69□□□□□ -2.14
MMP13P45452 MIR4255-201ENST00000579351 72 ntBASIC1.69□□□□□ -2.14
MMP13P45452 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.69□□□□□ -2.14
MMP13P45452 AC095038.3-201ENST00000634439 195 ntBASIC1.69□□□□□ -2.14
MMP13P45452 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
MMP13P45452 RNU6-457P-201ENST00000363999 107 ntBASIC1.68□□□□□ -2.14
MMP13P45452 Y_RNA.241-201ENST00000364470 117 ntBASIC1.68□□□□□ -2.14
MMP13P45452 Y_RNA.281-201ENST00000364774 94 ntBASIC1.68□□□□□ -2.14
MMP13P45452 RNU1-133P-201ENST00000364867 167 ntBASIC1.68□□□□□ -2.14
MMP13P45452 SNORD38C-201ENST00000384381 69 ntBASIC1.68□□□□□ -2.14
MMP13P45452 RNA5SP89-201ENST00000410300 108 ntBASIC1.68□□□□□ -2.14
MMP13P45452 RNU6-1190P-201ENST00000410811 104 ntBASIC1.68□□□□□ -2.14
MMP13P45452 RNA5SP136-201ENST00000410906 107 ntBASIC1.68□□□□□ -2.14
MMP13P45452 RPL31P63-201ENST00000422565 375 ntBASIC1.68□□□□□ -2.14
MMP13P45452 AC069257.2-201ENST00000441819 155 ntBASIC1.68□□□□□ -2.14
MMP13P45452 snoU13.27-201ENST00000459278 104 ntBASIC1.68□□□□□ -2.14
MMP13P45452 RNU7-34P-201ENST00000459394 64 ntBASIC1.68□□□□□ -2.14
MMP13P45452 AC008834.1-201ENST00000511612 175 ntBASIC1.68□□□□□ -2.14
MMP13P45452 RNU6-998P-201ENST00000515894 101 ntBASIC1.68□□□□□ -2.14
MMP13P45452 RNU6-1258P-201ENST00000516911 111 ntBASIC1.68□□□□□ -2.14
MMP13P45452 SNORA44.1-201ENST00000517031 108 ntBASIC1.68□□□□□ -2.14
MMP13P45452 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.68□□□□□ -2.14
MMP13P45452 MIR3683-201ENST00000580847 82 ntBASIC1.68□□□□□ -2.14
MMP13P45452 AC021443.1-201ENST00000604478 211 ntBASIC1.68□□□□□ -2.14
MMP13P45452 RNU6-661P-201ENST00000362409 107 ntBASIC1.67□□□□□ -2.14
MMP13P45452 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
MMP13P45452 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.67□□□□□ -2.14
MMP13P45452 RNU7-164P-201ENST00000459221 62 ntBASIC1.67□□□□□ -2.14
MMP13P45452 RNU2-13P-201ENST00000515909 113 ntBASIC1.67□□□□□ -2.14
MMP13P45452 RNU6-548P-201ENST00000517083 115 ntBASIC1.67□□□□□ -2.14
MMP13P45452 MIR548AR-201ENST00000582191 57 ntBASIC1.67□□□□□ -2.14
MMP13P45452 SNORD115-34-201ENST00000362441 82 ntBASIC1.66□□□□□ -2.14
MMP13P45452 SNORD115-12-201ENST00000362583 82 ntBASIC1.66□□□□□ -2.14
MMP13P45452 SNORD115-29-201ENST00000362834 82 ntBASIC1.66□□□□□ -2.14
MMP13P45452 SNORD115-9-201ENST00000362912 82 ntBASIC1.66□□□□□ -2.14
MMP13P45452 SNORD115-21-201ENST00000362963 81 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms