Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC099654.13-201ENST00000639774 207 ntBASIC-1.9□□□□□ -2.71
CLIP1P30622 RNU6-660P-201ENST00000364566 109 ntBASIC-1.91□□□□□ -2.71
CLIP1P30622 RNU6-571P-201ENST00000384128 107 ntBASIC-1.91□□□□□ -2.71
CLIP1P30622 USP9YP23-201ENST00000455085 407 ntBASIC-1.91□□□□□ -2.71
CLIP1P30622 MTCO2P30-201ENST00000503662 364 ntBASIC-1.91□□□□□ -2.71
CLIP1P30622 Vault.3-201ENST00000516676 95 ntBASIC-1.91□□□□□ -2.71
CLIP1P30622 AC245505.1-201ENST00000556398 224 ntBASIC-1.91□□□□□ -2.71
CLIP1P30622 AC122108.2-201ENST00000611946 526 ntBASIC-1.91□□□□□ -2.71
CLIP1P30622 snoR1.1-201ENST00000628177 80 ntBASIC-1.91□□□□□ -2.71
CLIP1P30622 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-1.91□□□□□ -2.71
CLIP1P30622 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.91□□□□□ -2.72
CLIP1P30622 RNU2-14P-201ENST00000411053 191 ntBASIC-1.91□□□□□ -2.72
CLIP1P30622 RNU6-592P-201ENST00000411333 103 ntBASIC-1.91□□□□□ -2.72
CLIP1P30622 SNORD11-201ENST00000459124 84 ntBASIC-1.91□□□□□ -2.72
CLIP1P30622 AC097510.1-201ENST00000510945 133 ntBASIC-1.91□□□□□ -2.72
CLIP1P30622 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.91□□□□□ -2.72
CLIP1P30622 RNU7-116P-201ENST00000516940 62 ntBASIC-1.91□□□□□ -2.72
CLIP1P30622 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.91□□□□□ -2.72
CLIP1P30622 AC245884.10-201ENST00000597355 337 ntBASIC-1.91□□□□□ -2.72
CLIP1P30622 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.92□□□□□ -2.72
CLIP1P30622 CYCSP46-201ENST00000423569 204 ntBASIC-1.92□□□□□ -2.72
CLIP1P30622 MTND3P7-201ENST00000474435 343 ntBASIC-1.92□□□□□ -2.72
CLIP1P30622 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.92□□□□□ -2.72
CLIP1P30622 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.92□□□□□ -2.72
CLIP1P30622 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.92□□□□□ -2.72
CLIP1P30622 AC004467.1-201ENST00000615678 330 ntBASIC-1.92□□□□□ -2.72
CLIP1P30622 MIR6818-201ENST00000621576 65 ntBASIC-1.92□□□□□ -2.72
CLIP1P30622 MIR1246-201ENST00000636535 73 ntBASIC-1.92□□□□□ -2.72
CLIP1P30622 AL163152.1-201ENST00000642001 374 ntBASIC-1.92□□□□□ -2.72
CLIP1P30622 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.93□□□□□ -2.72
CLIP1P30622 Y_RNA.405-201ENST00000383979 100 ntBASIC-1.93□□□□□ -2.72
CLIP1P30622 Y_RNA.451-201ENST00000384200 100 ntBASIC-1.93□□□□□ -2.72
CLIP1P30622 Y_RNA.524-201ENST00000384564 100 ntBASIC-1.93□□□□□ -2.72
CLIP1P30622 Y_RNA.561-201ENST00000384694 100 ntBASIC-1.93□□□□□ -2.72
CLIP1P30622 RNU6-903P-201ENST00000391270 109 ntBASIC-1.93□□□□□ -2.72
CLIP1P30622 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.93□□□□□ -2.72
CLIP1P30622 AC022028.1-201ENST00000412054 408 ntBASIC-1.93□□□□□ -2.72
CLIP1P30622 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.93□□□□□ -2.72
CLIP1P30622 CCDC34P1-201ENST00000507441 517 ntBASIC-1.93□□□□□ -2.72
CLIP1P30622 RNU7-175P-201ENST00000515915 61 ntBASIC-1.93□□□□□ -2.72
CLIP1P30622 YWHAEP3-201ENST00000582767 121 ntBASIC-1.93□□□□□ -2.72
CLIP1P30622 AL357078.3-201ENST00000607528 618 ntBASIC-1.93□□□□□ -2.72
CLIP1P30622 HULC.1-201ENST00000612720 240 ntBASIC-1.93□□□□□ -2.72
CLIP1P30622 MIR302B-201ENST00000362188 73 ntBASIC-1.94□□□□□ -2.72
CLIP1P30622 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.94□□□□□ -2.72
CLIP1P30622 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.94□□□□□ -2.72
CLIP1P30622 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.94□□□□□ -2.72
CLIP1P30622 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.94□□□□□ -2.72
CLIP1P30622 RNY3P9-201ENST00000384727 106 ntBASIC-1.94□□□□□ -2.72
CLIP1P30622 MIR29B1-201ENST00000385015 81 ntBASIC-1.94□□□□□ -2.72
CLIP1P30622 RNU2-51P-201ENST00000410708 197 ntBASIC-1.94□□□□□ -2.72
CLIP1P30622 RNU4-61P-201ENST00000411243 107 ntBASIC-1.94□□□□□ -2.72
CLIP1P30622 EIF1P2-201ENST00000428233 350 ntBASIC-1.94□□□□□ -2.72
CLIP1P30622 TPTE2P5-203ENST00000458118 728 ntBASIC-1.94□□□□□ -2.72
CLIP1P30622 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.94□□□□□ -2.72
CLIP1P30622 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-1.94□□□□□ -2.72
CLIP1P30622 RNU7-79P-201ENST00000516082 62 ntBASIC-1.94□□□□□ -2.72
CLIP1P30622 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.94□□□□□ -2.72
CLIP1P30622 AC068339.1-201ENST00000526965 141 ntBASIC-1.94□□□□□ -2.72
CLIP1P30622 MIR2681-201ENST00000581814 105 ntBASIC-1.94□□□□□ -2.72
CLIP1P30622 AP003357.1-201ENST00000604497 148 ntBASIC-1.94□□□□□ -2.72
CLIP1P30622 RNU4-50P-201ENST00000364361 141 ntBASIC-1.95□□□□□ -2.72
CLIP1P30622 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.95□□□□□ -2.72
CLIP1P30622 RNU6-790P-201ENST00000384479 105 ntBASIC-1.95□□□□□ -2.72
CLIP1P30622 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.95□□□□□ -2.72
CLIP1P30622 UBE2V1P12-201ENST00000503954 474 ntBASIC-1.95□□□□□ -2.72
CLIP1P30622 SNORA40.9-201ENST00000515895 93 ntBASIC-1.95□□□□□ -2.72
CLIP1P30622 AC007012.1-201ENST00000567192 175 ntBASIC-1.95□□□□□ -2.72
CLIP1P30622 MIR6502-201ENST00000617296 76 ntBASIC-1.95□□□□□ -2.72
CLIP1P30622 RNU5F-6P-201ENST00000362979 116 ntBASIC-1.96□□□□□ -2.72
CLIP1P30622 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.96□□□□□ -2.72
CLIP1P30622 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.96□□□□□ -2.72
CLIP1P30622 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.96□□□□□ -2.72
CLIP1P30622 RNU6-108P-201ENST00000365558 107 ntBASIC-1.96□□□□□ -2.72
CLIP1P30622 RNU6-524P-201ENST00000384270 107 ntBASIC-1.96□□□□□ -2.72
CLIP1P30622 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-1.96□□□□□ -2.72
CLIP1P30622 RNU7-195P-201ENST00000458793 62 ntBASIC-1.96□□□□□ -2.72
CLIP1P30622 AC127455.1-201ENST00000565496 145 ntBASIC-1.96□□□□□ -2.72
CLIP1P30622 MIR5692C1-201ENST00000585309 91 ntBASIC-1.96□□□□□ -2.72
CLIP1P30622 Y_RNA.106-201ENST00000363189 100 ntBASIC-1.97□□□□□ -2.72
CLIP1P30622 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.97□□□□□ -2.72
CLIP1P30622 SNORA51.5-201ENST00000384126 131 ntBASIC-1.97□□□□□ -2.72
CLIP1P30622 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.97□□□□□ -2.72
CLIP1P30622 RNU7-187P-201ENST00000458985 68 ntBASIC-1.97□□□□□ -2.72
CLIP1P30622 MIR2113-201ENST00000459007 91 ntBASIC-1.97□□□□□ -2.72
CLIP1P30622 SNORD2-201ENST00000459163 69 ntBASIC-1.97□□□□□ -2.72
CLIP1P30622 MIR548AY-201ENST00000617669 107 ntBASIC-1.97□□□□□ -2.72
CLIP1P30622 AL138960.2-201ENST00000625145 535 ntBASIC-1.97□□□□□ -2.72
CLIP1P30622 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.98□□□□□ -2.73
CLIP1P30622 MIR582-201ENST00000365731 98 ntBASIC-1.98□□□□□ -2.73
CLIP1P30622 RNU6-429P-201ENST00000384582 108 ntBASIC-1.98□□□□□ -2.73
CLIP1P30622 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.98□□□□□ -2.73
CLIP1P30622 AC107027.2-201ENST00000512197 115 ntBASIC-1.98□□□□□ -2.73
CLIP1P30622 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.98□□□□□ -2.73
CLIP1P30622 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.98□□□□□ -2.73
CLIP1P30622 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.99□□□□□ -2.73
CLIP1P30622 RNY4P7-201ENST00000364600 96 ntBASIC-1.99□□□□□ -2.73
CLIP1P30622 RNU6-214P-201ENST00000384130 107 ntBASIC-1.99□□□□□ -2.73
CLIP1P30622 MTND3P21-201ENST00000433774 331 ntBASIC-1.99□□□□□ -2.73
CLIP1P30622 RNU7-180P-201ENST00000459240 63 ntBASIC-1.99□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 310.4 ms