Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC107399.1-201ENST00000451226 265 ntBASIC-1.04□□□□□ -2.58
TPM1P09493 MIR4662B-201ENST00000579498 81 ntBASIC-1.04□□□□□ -2.58
TPM1P09493 U6.92-201ENST00000636464 89 ntBASIC-1.04□□□□□ -2.58
TPM1P09493 AC073869.9-201ENST00000641610 120 ntBASIC-1.04□□□□□ -2.58
TPM1P09493 RNU6-801P-201ENST00000364087 105 ntBASIC-1.05□□□□□ -2.58
TPM1P09493 RNU6-597P-201ENST00000365620 102 ntBASIC-1.05□□□□□ -2.58
TPM1P09493 SNORD24-201ENST00000383884 75 ntBASIC-1.05□□□□□ -2.58
TPM1P09493 RNU6-949P-201ENST00000384040 107 ntBASIC-1.05□□□□□ -2.58
TPM1P09493 RNU7-169P-201ENST00000459456 61 ntBASIC-1.05□□□□□ -2.58
TPM1P09493 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.05□□□□□ -2.58
TPM1P09493 AC245008.1-201ENST00000608123 476 ntBASIC-1.05□□□□□ -2.58
TPM1P09493 MIR3974-201ENST00000637126 96 ntBASIC-1.05□□□□□ -2.58
TPM1P09493 SNORD115-24-201ENST00000363528 82 ntBASIC-1.06□□□□□ -2.58
TPM1P09493 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.06□□□□□ -2.58
TPM1P09493 MIR876-201ENST00000401147 81 ntBASIC-1.06□□□□□ -2.58
TPM1P09493 AL049861.1-201ENST00000603130 150 ntBASIC-1.06□□□□□ -2.58
TPM1P09493 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.07□□□□□ -2.58
TPM1P09493 SNORD114-11-201ENST00000363738 75 ntBASIC-1.07□□□□□ -2.58
TPM1P09493 RNU6-144P-201ENST00000383951 107 ntBASIC-1.07□□□□□ -2.58
TPM1P09493 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.07□□□□□ -2.58
TPM1P09493 AC108059.2-201ENST00000434626 151 ntBASIC-1.07□□□□□ -2.58
TPM1P09493 AC114755.3-201ENST00000481111 251 ntBASIC-1.07□□□□□ -2.58
TPM1P09493 Y_RNA.205-201ENST00000364128 113 ntBASIC-1.08□□□□□ -2.58
TPM1P09493 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.08□□□□□ -2.58
TPM1P09493 RNU6-811P-201ENST00000384069 107 ntBASIC-1.08□□□□□ -2.58
TPM1P09493 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.08□□□□□ -2.58
TPM1P09493 Y_RNA.605-201ENST00000410577 105 ntBASIC-1.08□□□□□ -2.58
TPM1P09493 SNORD77.4-201ENST00000516158 81 ntBASIC-1.08□□□□□ -2.58
TPM1P09493 RNU6-911P-201ENST00000516523 104 ntBASIC-1.08□□□□□ -2.58
TPM1P09493 RNU6-314P-201ENST00000516574 104 ntBASIC-1.08□□□□□ -2.58
TPM1P09493 RNU6-264P-201ENST00000517134 104 ntBASIC-1.08□□□□□ -2.58
TPM1P09493 AL360085.1-201ENST00000604713 532 ntBASIC-1.08□□□□□ -2.58
TPM1P09493 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.08□□□□□ -2.58
TPM1P09493 U2.1-201ENST00000618978 145 ntBASIC-1.08□□□□□ -2.58
TPM1P09493 MIR302B-201ENST00000362188 73 ntBASIC-1.09□□□□□ -2.58
TPM1P09493 MIR342-201ENST00000362212 99 ntBASIC-1.09□□□□□ -2.58
TPM1P09493 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.09□□□□□ -2.58
TPM1P09493 SNORA63.5-201ENST00000363548 123 ntBASIC-1.09□□□□□ -2.58
TPM1P09493 RNA5SP457-201ENST00000363657 124 ntBASIC-1.09□□□□□ -2.58
TPM1P09493 Y_RNA.280-201ENST00000364765 112 ntBASIC-1.09□□□□□ -2.58
TPM1P09493 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.09□□□□□ -2.58
TPM1P09493 SNORA1-201ENST00000384107 130 ntBASIC-1.09□□□□□ -2.58
TPM1P09493 SNORD61-201ENST00000384252 73 ntBASIC-1.09□□□□□ -2.58
TPM1P09493 MIR628-201ENST00000385229 95 ntBASIC-1.09□□□□□ -2.58
TPM1P09493 MTATP6P17-201ENST00000431030 672 ntBASIC-1.09□□□□□ -2.58
TPM1P09493 RNU7-45P-201ENST00000459460 63 ntBASIC-1.09□□□□□ -2.58
TPM1P09493 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.09□□□□□ -2.58
TPM1P09493 AC084368.1-201ENST00000620935 65 ntBASIC-1.09□□□□□ -2.58
TPM1P09493 AC099654.14-201ENST00000638599 341 ntBASIC-1.09□□□□□ -2.58
TPM1P09493 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.09□□□□□ -2.58
TPM1P09493 RNU6-888P-201ENST00000363010 101 ntBASIC-1.1□□□□□ -2.59
TPM1P09493 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.1□□□□□ -2.59
TPM1P09493 RNU6-899P-201ENST00000363947 107 ntBASIC-1.1□□□□□ -2.59
TPM1P09493 RNY3P11-201ENST00000364153 102 ntBASIC-1.1□□□□□ -2.59
TPM1P09493 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.1□□□□□ -2.59
TPM1P09493 RNU6-480P-201ENST00000384332 107 ntBASIC-1.1□□□□□ -2.59
TPM1P09493 RNU6-308P-201ENST00000390957 107 ntBASIC-1.1□□□□□ -2.59
TPM1P09493 RNU6-120P-201ENST00000516077 103 ntBASIC-1.1□□□□□ -2.59
TPM1P09493 RNU6-506P-201ENST00000516553 94 ntBASIC-1.1□□□□□ -2.59
TPM1P09493 MIR4432-201ENST00000581823 84 ntBASIC-1.1□□□□□ -2.59
TPM1P09493 AC011373.1-201ENST00000607270 237 ntBASIC-1.1□□□□□ -2.59
TPM1P09493 RNY4P14-201ENST00000363656 96 ntBASIC-1.11□□□□□ -2.59
TPM1P09493 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.11□□□□□ -2.59
TPM1P09493 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.11□□□□□ -2.59
TPM1P09493 RNU6-510P-201ENST00000391239 108 ntBASIC-1.11□□□□□ -2.59
TPM1P09493 RNU2-16P-201ENST00000410712 136 ntBASIC-1.11□□□□□ -2.59
TPM1P09493 AC244250.2-201ENST00000418731 148 ntBASIC-1.11□□□□□ -2.59
TPM1P09493 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.11□□□□□ -2.59
TPM1P09493 RNU7-110P-201ENST00000516891 62 ntBASIC-1.11□□□□□ -2.59
TPM1P09493 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.11□□□□□ -2.59
TPM1P09493 MIR655-201ENST00000362159 97 ntBASIC-1.12□□□□□ -2.59
TPM1P09493 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.12□□□□□ -2.59
TPM1P09493 Y_RNA.412-201ENST00000384001 104 ntBASIC-1.12□□□□□ -2.59
TPM1P09493 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.12□□□□□ -2.59
TPM1P09493 MTATP6P26-201ENST00000445926 662 ntBASIC-1.12□□□□□ -2.59
TPM1P09493 AC244505.6-201ENST00000452829 130 ntBASIC-1.12□□□□□ -2.59
TPM1P09493 RNU6-126P-201ENST00000516685 103 ntBASIC-1.12□□□□□ -2.59
TPM1P09493 AC100767.1-201ENST00000528178 123 ntBASIC-1.12□□□□□ -2.59
TPM1P09493 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
TPM1P09493 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.12□□□□□ -2.59
TPM1P09493 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-1.13□□□□□ -2.59
TPM1P09493 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.13□□□□□ -2.59
TPM1P09493 RNU6-923P-201ENST00000364753 107 ntBASIC-1.13□□□□□ -2.59
TPM1P09493 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.13□□□□□ -2.59
TPM1P09493 RNU6-383P-201ENST00000410864 94 ntBASIC-1.13□□□□□ -2.59
TPM1P09493 HMGN2P22-201ENST00000427588 175 ntBASIC-1.13□□□□□ -2.59
TPM1P09493 RNU7-161P-201ENST00000517289 62 ntBASIC-1.13□□□□□ -2.59
TPM1P09493 AL669831.3-213ENST00000636676 183 ntBASIC-1.13□□□□□ -2.59
TPM1P09493 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.14□□□□□ -2.59
TPM1P09493 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.14□□□□□ -2.59
TPM1P09493 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.14□□□□□ -2.59
TPM1P09493 AF228730.3-201ENST00000436691 102 ntBASIC-1.14□□□□□ -2.59
TPM1P09493 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.14□□□□□ -2.59
TPM1P09493 AL590491.3-201ENST00000610731 82 ntBASIC-1.14□□□□□ -2.59
TPM1P09493 MIR101-2-201ENST00000362195 79 ntBASIC-1.15□□□□□ -2.59
TPM1P09493 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.15□□□□□ -2.59
TPM1P09493 MIR181A1-201ENST00000385026 110 ntBASIC-1.15□□□□□ -2.59
TPM1P09493 SNORD41.1-201ENST00000391000 69 ntBASIC-1.15□□□□□ -2.59
TPM1P09493 MTND4LP11-201ENST00000422184 280 ntBASIC-1.15□□□□□ -2.59
TPM1P09493 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 211.8 ms