Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 SNORD115-14-201ENST00000363090 81 ntBASIC1.78□□□□□ -2.12
RHOP08100 SNORD115-13-201ENST00000363358 82 ntBASIC1.78□□□□□ -2.12
RHOP08100 SNORD115-41-201ENST00000363608 82 ntBASIC1.78□□□□□ -2.12
RHOP08100 SNORD115-11-201ENST00000363616 82 ntBASIC1.78□□□□□ -2.12
RHOP08100 SNORD115-5-201ENST00000363633 82 ntBASIC1.78□□□□□ -2.12
RHOP08100 SNORD115-39-201ENST00000363694 82 ntBASIC1.78□□□□□ -2.12
RHOP08100 SNORD115-4-201ENST00000363810 82 ntBASIC1.78□□□□□ -2.12
RHOP08100 SNORD115-16-201ENST00000363887 82 ntBASIC1.78□□□□□ -2.12
RHOP08100 SNORD115-6-201ENST00000363942 82 ntBASIC1.78□□□□□ -2.12
RHOP08100 RNU6-647P-201ENST00000364243 107 ntBASIC1.78□□□□□ -2.12
RHOP08100 SNORD115-42-201ENST00000364273 82 ntBASIC1.78□□□□□ -2.12
RHOP08100 SNORD115-15-201ENST00000364809 81 ntBASIC1.78□□□□□ -2.12
RHOP08100 Y_RNA.294-201ENST00000364916 102 ntBASIC1.78□□□□□ -2.12
RHOP08100 SNORD115-1-201ENST00000364961 82 ntBASIC1.78□□□□□ -2.12
RHOP08100 SNORD115-26-201ENST00000365067 82 ntBASIC1.78□□□□□ -2.12
RHOP08100 SNORD115-10-201ENST00000365073 81 ntBASIC1.78□□□□□ -2.12
RHOP08100 SNORD115-43-201ENST00000365503 82 ntBASIC1.78□□□□□ -2.12
RHOP08100 SNORD115-36-201ENST00000365629 82 ntBASIC1.78□□□□□ -2.12
RHOP08100 MIR526A1-201ENST00000384897 85 ntBASIC1.78□□□□□ -2.12
RHOP08100 MIR136-201ENST00000385207 82 ntBASIC1.78□□□□□ -2.12
RHOP08100 SNORA40.5-201ENST00000391061 128 ntBASIC1.78□□□□□ -2.12
RHOP08100 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.78□□□□□ -2.12
RHOP08100 AC093850.1-201ENST00000454121 251 ntBASIC1.78□□□□□ -2.12
RHOP08100 SNORA44.1-201ENST00000517031 108 ntBASIC1.78□□□□□ -2.12
RHOP08100 MIR4419B-201ENST00000577260 68 ntBASIC1.78□□□□□ -2.12
RHOP08100 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.78□□□□□ -2.12
RHOP08100 SNORD115-40-201ENST00000606510 82 ntBASIC1.78□□□□□ -2.12
RHOP08100 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.78□□□□□ -2.12
RHOP08100 Y_RNA.226-201ENST00000364337 114 ntBASIC1.77□□□□□ -2.13
RHOP08100 Y_RNA.261-201ENST00000364631 102 ntBASIC1.77□□□□□ -2.13
RHOP08100 SNORA2.2-201ENST00000365473 135 ntBASIC1.77□□□□□ -2.13
RHOP08100 RNU6-203P-201ENST00000384038 104 ntBASIC1.77□□□□□ -2.13
RHOP08100 Y_RNA.617-201ENST00000410920 90 ntBASIC1.77□□□□□ -2.13
RHOP08100 JTBP1-201ENST00000441314 247 ntBASIC1.77□□□□□ -2.13
RHOP08100 MIR4778-201ENST00000577635 80 ntBASIC1.77□□□□□ -2.13
RHOP08100 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
RHOP08100 MIR337-201ENST00000362281 93 ntBASIC1.76□□□□□ -2.13
RHOP08100 RNU6-508P-201ENST00000363231 103 ntBASIC1.76□□□□□ -2.13
RHOP08100 SNORA1.2-201ENST00000365189 134 ntBASIC1.76□□□□□ -2.13
RHOP08100 MIR516B2-201ENST00000385190 85 ntBASIC1.76□□□□□ -2.13
RHOP08100 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
RHOP08100 U8.17-201ENST00000391292 132 ntBASIC1.76□□□□□ -2.13
RHOP08100 AC004965.1-201ENST00000413033 213 ntBASIC1.76□□□□□ -2.13
RHOP08100 RNU7-107P-201ENST00000459121 61 ntBASIC1.76□□□□□ -2.13
RHOP08100 RPS26P48-201ENST00000491713 339 ntBASIC1.76□□□□□ -2.13
RHOP08100 RN7SL274P-201ENST00000492268 272 ntBASIC1.76□□□□□ -2.13
RHOP08100 RNU6-772P-201ENST00000516042 105 ntBASIC1.76□□□□□ -2.13
RHOP08100 AC012493.3-201ENST00000604494 112 ntBASIC1.76□□□□□ -2.13
RHOP08100 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.76□□□□□ -2.13
RHOP08100 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
RHOP08100 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.75□□□□□ -2.13
RHOP08100 RNU6-235P-201ENST00000362644 107 ntBASIC1.75□□□□□ -2.13
RHOP08100 MIR1267-201ENST00000408723 78 ntBASIC1.75□□□□□ -2.13
RHOP08100 RNU6-321P-201ENST00000410912 106 ntBASIC1.75□□□□□ -2.13
RHOP08100 Y_RNA.629-201ENST00000411368 105 ntBASIC1.75□□□□□ -2.13
RHOP08100 RNU7-80P-201ENST00000459562 61 ntBASIC1.75□□□□□ -2.13
RHOP08100 SNORA18.7-201ENST00000516910 131 ntBASIC1.75□□□□□ -2.13
RHOP08100 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.75□□□□□ -2.13
RHOP08100 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.75□□□□□ -2.13
RHOP08100 RNU6-834P-201ENST00000362367 110 ntBASIC1.74□□□□□ -2.13
RHOP08100 RNU6-414P-201ENST00000363705 104 ntBASIC1.74□□□□□ -2.13
RHOP08100 Y_RNA.241-201ENST00000364470 117 ntBASIC1.74□□□□□ -2.13
RHOP08100 Y_RNA.454-201ENST00000384224 113 ntBASIC1.74□□□□□ -2.13
RHOP08100 SNORA27-201ENST00000384323 126 ntBASIC1.74□□□□□ -2.13
RHOP08100 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.74□□□□□ -2.13
RHOP08100 RNU7-96P-201ENST00000459535 64 ntBASIC1.74□□□□□ -2.13
RHOP08100 RNU2-13P-201ENST00000515909 113 ntBASIC1.74□□□□□ -2.13
RHOP08100 AC090821.2-201ENST00000523552 176 ntBASIC1.74□□□□□ -2.13
RHOP08100 DNAJC19P9-201ENST00000555084 351 ntBASIC1.74□□□□□ -2.13
RHOP08100 AL359821.1-201ENST00000605519 182 ntBASIC1.74□□□□□ -2.13
RHOP08100 MIR3914-2-201ENST00000637339 95 ntBASIC1.74□□□□□ -2.13
RHOP08100 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
RHOP08100 Y_RNA.273-201ENST00000364703 102 ntBASIC1.73□□□□□ -2.13
RHOP08100 RNU6-439P-201ENST00000384188 106 ntBASIC1.73□□□□□ -2.13
RHOP08100 MIRLET7F2-201ENST00000385277 83 ntBASIC1.73□□□□□ -2.13
RHOP08100 MIR653-201ENST00000385279 96 ntBASIC1.73□□□□□ -2.13
RHOP08100 SUMO2P12-201ENST00000405924 140 ntBASIC1.73□□□□□ -2.13
RHOP08100 MIR1287-201ENST00000408492 90 ntBASIC1.73□□□□□ -2.13
RHOP08100 RNU6-735P-201ENST00000410612 107 ntBASIC1.73□□□□□ -2.13
RHOP08100 RPS29P24-201ENST00000486345 171 ntBASIC1.73□□□□□ -2.13
RHOP08100 RNU6-998P-201ENST00000515894 101 ntBASIC1.73□□□□□ -2.13
RHOP08100 RNU7-181P-201ENST00000517234 74 ntBASIC1.73□□□□□ -2.13
RHOP08100 MIR3198-2-201ENST00000577868 80 ntBASIC1.73□□□□□ -2.13
RHOP08100 MIR3618-201ENST00000580330 88 ntBASIC1.73□□□□□ -2.13
RHOP08100 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.73□□□□□ -2.13
RHOP08100 AL512598.1-201ENST00000610158 273 ntBASIC1.73□□□□□ -2.13
RHOP08100 AC095038.3-201ENST00000634439 195 ntBASIC1.73□□□□□ -2.13
RHOP08100 RNU1-133P-201ENST00000364867 167 ntBASIC1.72□□□□□ -2.13
RHOP08100 SNORD58C-201ENST00000365223 64 ntBASIC1.72□□□□□ -2.13
RHOP08100 SNORA24-201ENST00000384096 131 ntBASIC1.72□□□□□ -2.13
RHOP08100 RNU7-95P-201ENST00000459222 64 ntBASIC1.72□□□□□ -2.13
RHOP08100 SNORD123-201ENST00000459473 70 ntBASIC1.72□□□□□ -2.13
RHOP08100 RNU6-917P-201ENST00000516294 104 ntBASIC1.72□□□□□ -2.13
RHOP08100 AL359881.1-201ENST00000602916 267 ntBASIC1.72□□□□□ -2.13
RHOP08100 AC108081.1-201ENST00000604358 221 ntBASIC1.72□□□□□ -2.13
RHOP08100 AC103810.8-201ENST00000607347 118 ntBASIC1.72□□□□□ -2.13
RHOP08100 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.72□□□□□ -2.13
RHOP08100 AC091932.4-201ENST00000623386 200 ntBASIC1.72□□□□□ -2.13
RHOP08100 RNU6-349P-201ENST00000362402 107 ntBASIC1.71□□□□□ -2.14
RHOP08100 RNU6-1290P-201ENST00000362957 109 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 223.2 ms