Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.29□□□□□ -2.46
UBFD1O14562 U8.15-201ENST00000390947 134 ntBASIC-0.29□□□□□ -2.46
UBFD1O14562 RNU6-308P-201ENST00000390957 107 ntBASIC-0.29□□□□□ -2.46
UBFD1O14562 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.29□□□□□ -2.46
UBFD1O14562 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.29□□□□□ -2.46
UBFD1O14562 AC087499.4-201ENST00000448505 178 ntBASIC-0.29□□□□□ -2.46
UBFD1O14562 AC069439.1-201ENST00000494739 167 ntBASIC-0.29□□□□□ -2.46
UBFD1O14562 RNU6-782P-201ENST00000516852 104 ntBASIC-0.29□□□□□ -2.46
UBFD1O14562 RNU7-110P-201ENST00000516891 62 ntBASIC-0.29□□□□□ -2.46
UBFD1O14562 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.29□□□□□ -2.46
UBFD1O14562 AL049861.1-201ENST00000603130 150 ntBASIC-0.29□□□□□ -2.46
UBFD1O14562 AL133255.1-201ENST00000606374 441 ntBASIC-0.29□□□□□ -2.46
UBFD1O14562 MIR6082-201ENST00000613604 109 ntBASIC-0.29□□□□□ -2.46
UBFD1O14562 AC091304.10-201ENST00000641554 121 ntBASIC-0.29□□□□□ -2.46
UBFD1O14562 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.3□□□□□ -2.46
UBFD1O14562 MIR548A2-201ENST00000384956 97 ntBASIC-0.3□□□□□ -2.46
UBFD1O14562 MIR628-201ENST00000385229 95 ntBASIC-0.3□□□□□ -2.46
UBFD1O14562 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.3□□□□□ -2.46
UBFD1O14562 MIR548F1-201ENST00000408667 84 ntBASIC-0.3□□□□□ -2.46
UBFD1O14562 RNU6-370P-201ENST00000411008 104 ntBASIC-0.3□□□□□ -2.46
UBFD1O14562 AC096949.1-201ENST00000412047 152 ntBASIC-0.3□□□□□ -2.46
UBFD1O14562 RNU2-11P-201ENST00000459191 187 ntBASIC-0.3□□□□□ -2.46
UBFD1O14562 RNU7-45P-201ENST00000459460 63 ntBASIC-0.3□□□□□ -2.46
UBFD1O14562 RNU6-848P-201ENST00000515948 107 ntBASIC-0.3□□□□□ -2.46
UBFD1O14562 RNU6-617P-201ENST00000516147 107 ntBASIC-0.3□□□□□ -2.46
UBFD1O14562 RNU6-473P-201ENST00000516164 107 ntBASIC-0.3□□□□□ -2.46
UBFD1O14562 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.3□□□□□ -2.46
UBFD1O14562 AC011373.1-201ENST00000607270 237 ntBASIC-0.3□□□□□ -2.46
UBFD1O14562 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.3□□□□□ -2.46
UBFD1O14562 Y_RNA.3-201ENST00000362331 103 ntBASIC-0.31□□□□□ -2.46
UBFD1O14562 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.31□□□□□ -2.46
UBFD1O14562 SNORD114-15-201ENST00000364687 72 ntBASIC-0.31□□□□□ -2.46
UBFD1O14562 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.31□□□□□ -2.46
UBFD1O14562 Y_RNA.516-201ENST00000384541 124 ntBASIC-0.31□□□□□ -2.46
UBFD1O14562 RNU6-291P-201ENST00000384720 107 ntBASIC-0.31□□□□□ -2.46
UBFD1O14562 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.31□□□□□ -2.46
UBFD1O14562 RNU6-693P-201ENST00000516134 107 ntBASIC-0.31□□□□□ -2.46
UBFD1O14562 MTND5P34-201ENST00000568888 325 ntBASIC-0.31□□□□□ -2.46
UBFD1O14562 AL021707.8-201ENST00000609428 183 ntBASIC-0.31□□□□□ -2.46
UBFD1O14562 AC010205.1-201ENST00000616668 449 ntBASIC-0.31□□□□□ -2.46
UBFD1O14562 AC244669.1-204ENST00000621564 178 ntBASIC-0.31□□□□□ -2.46
UBFD1O14562 AC099654.14-201ENST00000638599 341 ntBASIC-0.31□□□□□ -2.46
UBFD1O14562 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.32□□□□□ -2.46
UBFD1O14562 RNU4-24P-201ENST00000364565 139 ntBASIC-0.32□□□□□ -2.46
UBFD1O14562 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.32□□□□□ -2.46
UBFD1O14562 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.32□□□□□ -2.46
UBFD1O14562 SNORD61-201ENST00000384252 73 ntBASIC-0.32□□□□□ -2.46
UBFD1O14562 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.32□□□□□ -2.46
UBFD1O14562 RNU6-937P-201ENST00000384325 106 ntBASIC-0.32□□□□□ -2.46
UBFD1O14562 SNORA26.6-201ENST00000391256 115 ntBASIC-0.32□□□□□ -2.46
UBFD1O14562 MIR548I3-201ENST00000408378 149 ntBASIC-0.32□□□□□ -2.46
UBFD1O14562 RNU6-718P-201ENST00000516166 105 ntBASIC-0.32□□□□□ -2.46
UBFD1O14562 RNU6-911P-201ENST00000516523 104 ntBASIC-0.32□□□□□ -2.46
UBFD1O14562 AC138869.1-201ENST00000568623 124 ntBASIC-0.32□□□□□ -2.46
UBFD1O14562 MIR4491-201ENST00000581087 68 ntBASIC-0.32□□□□□ -2.46
UBFD1O14562 MIR4743-201ENST00000584576 69 ntBASIC-0.32□□□□□ -2.46
UBFD1O14562 AC002553.4-201ENST00000616896 331 ntBASIC-0.32□□□□□ -2.46
UBFD1O14562 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.33□□□□□ -2.46
UBFD1O14562 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.33□□□□□ -2.46
UBFD1O14562 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.33□□□□□ -2.46
UBFD1O14562 MIR559-201ENST00000385188 96 ntBASIC-0.33□□□□□ -2.46
UBFD1O14562 SNORD77.3-201ENST00000391113 65 ntBASIC-0.33□□□□□ -2.46
UBFD1O14562 POLR2KP2-201ENST00000438155 177 ntBASIC-0.33□□□□□ -2.46
UBFD1O14562 RNU2-31P-201ENST00000516954 155 ntBASIC-0.33□□□□□ -2.46
UBFD1O14562 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.33□□□□□ -2.46
UBFD1O14562 MIR3152-201ENST00000579801 74 ntBASIC-0.33□□□□□ -2.46
UBFD1O14562 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.33□□□□□ -2.46
UBFD1O14562 AL662814.1-201ENST00000617364 121 ntBASIC-0.33□□□□□ -2.46
UBFD1O14562 MIR6717-201ENST00000622747 73 ntBASIC-0.33□□□□□ -2.46
UBFD1O14562 RNU6-161P-201ENST00000363051 106 ntBASIC-0.34□□□□□ -2.46
UBFD1O14562 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.34□□□□□ -2.46
UBFD1O14562 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.34□□□□□ -2.46
UBFD1O14562 AF228730.3-201ENST00000436691 102 ntBASIC-0.34□□□□□ -2.46
UBFD1O14562 MTND1P34-201ENST00000438556 671 ntBASIC-0.34□□□□□ -2.46
UBFD1O14562 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.34□□□□□ -2.46
UBFD1O14562 RNU7-165P-201ENST00000458864 60 ntBASIC-0.34□□□□□ -2.46
UBFD1O14562 RNU6-998P-201ENST00000515894 101 ntBASIC-0.34□□□□□ -2.46
UBFD1O14562 RNU6-720P-201ENST00000516363 108 ntBASIC-0.34□□□□□ -2.46
UBFD1O14562 RNU6-699P-201ENST00000517081 110 ntBASIC-0.34□□□□□ -2.46
UBFD1O14562 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.34□□□□□ -2.46
UBFD1O14562 MIR4639-201ENST00000584938 69 ntBASIC-0.34□□□□□ -2.46
UBFD1O14562 MIR8064-201ENST00000612863 90 ntBASIC-0.34□□□□□ -2.46
UBFD1O14562 MIR342-201ENST00000362212 99 ntBASIC-0.35□□□□□ -2.47
UBFD1O14562 RNA5SP245-201ENST00000364239 121 ntBASIC-0.35□□□□□ -2.47
UBFD1O14562 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.35□□□□□ -2.47
UBFD1O14562 RNU6-535P-201ENST00000384722 107 ntBASIC-0.35□□□□□ -2.47
UBFD1O14562 MIR501-201ENST00000390204 84 ntBASIC-0.35□□□□□ -2.47
UBFD1O14562 RNU6-763P-201ENST00000390865 106 ntBASIC-0.35□□□□□ -2.47
UBFD1O14562 AC016907.1-201ENST00000419483 435 ntBASIC-0.35□□□□□ -2.47
UBFD1O14562 AL160004.2-201ENST00000432935 350 ntBASIC-0.35□□□□□ -2.47
UBFD1O14562 AC023449.1-201ENST00000454464 154 ntBASIC-0.35□□□□□ -2.47
UBFD1O14562 RNU7-159P-201ENST00000459284 62 ntBASIC-0.35□□□□□ -2.47
UBFD1O14562 RNU6-191P-201ENST00000516295 94 ntBASIC-0.35□□□□□ -2.47
UBFD1O14562 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.35□□□□□ -2.47
UBFD1O14562 VN1R91P-201ENST00000594377 169 ntBASIC-0.35□□□□□ -2.47
UBFD1O14562 AC124312.5-201ENST00000604451 268 ntBASIC-0.35□□□□□ -2.47
UBFD1O14562 AL670379.3-201ENST00000605040 251 ntBASIC-0.35□□□□□ -2.47
UBFD1O14562 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.36□□□□□ -2.47
UBFD1O14562 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.36□□□□□ -2.47
UBFD1O14562 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 1142.2 ms