Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 U2.14-201ENST00000615943 113 ntBASIC0.62□□□□□ -2.31
NKX2-6A6NCS4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.62□□□□□ -2.31
NKX2-6A6NCS4 7SK.10-201ENST00000621414 298 ntBASIC0.62□□□□□ -2.31
NKX2-6A6NCS4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.62□□□□□ -2.31
NKX2-6A6NCS4 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.62□□□□□ -2.31
NKX2-6A6NCS4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.61□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.47-201ENST00000362697 108 ntBASIC0.61□□□□□ -2.31
NKX2-6A6NCS4 SNORD115-28-201ENST00000363931 81 ntBASIC0.61□□□□□ -2.31
NKX2-6A6NCS4 RNU6-125P-201ENST00000384505 107 ntBASIC0.61□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.537-201ENST00000384626 109 ntBASIC0.61□□□□□ -2.31
NKX2-6A6NCS4 RNU6-1011P-201ENST00000384668 107 ntBASIC0.61□□□□□ -2.31
NKX2-6A6NCS4 MIR200A-201ENST00000384875 90 ntBASIC0.61□□□□□ -2.31
NKX2-6A6NCS4 RNU6-847P-201ENST00000411115 108 ntBASIC0.61□□□□□ -2.31
NKX2-6A6NCS4 AL138752.1-201ENST00000452964 351 ntBASIC0.61□□□□□ -2.31
NKX2-6A6NCS4 SNRPGP8-201ENST00000454064 226 ntBASIC0.61□□□□□ -2.31
NKX2-6A6NCS4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.61□□□□□ -2.31
NKX2-6A6NCS4 RNU7-67P-201ENST00000459003 62 ntBASIC0.61□□□□□ -2.31
NKX2-6A6NCS4 RNU2-13P-201ENST00000515909 113 ntBASIC0.61□□□□□ -2.31
NKX2-6A6NCS4 RNU6-561P-201ENST00000516222 102 ntBASIC0.61□□□□□ -2.31
NKX2-6A6NCS4 RNA5SP255-201ENST00000516370 107 ntBASIC0.61□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.679-201ENST00000516416 91 ntBASIC0.61□□□□□ -2.31
NKX2-6A6NCS4 AL360085.1-201ENST00000604713 532 ntBASIC0.61□□□□□ -2.31
NKX2-6A6NCS4 AL365265.1-201ENST00000621045 234 ntBASIC0.61□□□□□ -2.31
NKX2-6A6NCS4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
NKX2-6A6NCS4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.30-201ENST00000362572 97 ntBASIC0.6□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.37-201ENST00000362606 108 ntBASIC0.6□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.76-201ENST00000362931 109 ntBASIC0.6□□□□□ -2.31
NKX2-6A6NCS4 RNU6-1309P-201ENST00000363305 108 ntBASIC0.6□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.176-201ENST00000363815 109 ntBASIC0.6□□□□□ -2.31
NKX2-6A6NCS4 SNORD45.3-201ENST00000363836 72 ntBASIC0.6□□□□□ -2.31
NKX2-6A6NCS4 SNORA1.2-201ENST00000365189 134 ntBASIC0.6□□□□□ -2.31
NKX2-6A6NCS4 RNU6-738P-201ENST00000384531 106 ntBASIC0.6□□□□□ -2.31
NKX2-6A6NCS4 RNU6-1067P-201ENST00000384752 107 ntBASIC0.6□□□□□ -2.31
NKX2-6A6NCS4 RNU2-38P-201ENST00000410856 79 ntBASIC0.6□□□□□ -2.31
NKX2-6A6NCS4 HMGN1P33-201ENST00000432945 451 ntBASIC0.6□□□□□ -2.31
NKX2-6A6NCS4 MTND5P15-201ENST00000434246 349 ntBASIC0.6□□□□□ -2.31
NKX2-6A6NCS4 AF228730.3-201ENST00000436691 102 ntBASIC0.6□□□□□ -2.31
NKX2-6A6NCS4 SNORD2.1-201ENST00000458762 69 ntBASIC0.6□□□□□ -2.31
NKX2-6A6NCS4 RNY3P16-201ENST00000516338 101 ntBASIC0.6□□□□□ -2.31
NKX2-6A6NCS4 SNORA18.4-201ENST00000516440 124 ntBASIC0.6□□□□□ -2.31
NKX2-6A6NCS4 RNU6-365P-201ENST00000517113 106 ntBASIC0.6□□□□□ -2.31
NKX2-6A6NCS4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.145-201ENST00000363527 102 ntBASIC0.59□□□□□ -2.31
NKX2-6A6NCS4 SNORD113.3-201ENST00000364630 78 ntBASIC0.59□□□□□ -2.31
NKX2-6A6NCS4 RNU6-396P-201ENST00000365369 105 ntBASIC0.59□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.374-201ENST00000365606 101 ntBASIC0.59□□□□□ -2.31
NKX2-6A6NCS4 RNU6-913P-201ENST00000390913 95 ntBASIC0.59□□□□□ -2.31
NKX2-6A6NCS4 AL606845.1-201ENST00000404881 255 ntBASIC0.59□□□□□ -2.31
NKX2-6A6NCS4 RNU6-994P-201ENST00000410507 111 ntBASIC0.59□□□□□ -2.31
NKX2-6A6NCS4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.59□□□□□ -2.31
NKX2-6A6NCS4 AP003484.1-201ENST00000530974 250 ntBASIC0.59□□□□□ -2.31
NKX2-6A6NCS4 AL117187.1-201ENST00000555482 181 ntBASIC0.59□□□□□ -2.31
NKX2-6A6NCS4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.59□□□□□ -2.31
NKX2-6A6NCS4 MIR342-201ENST00000362212 99 ntBASIC0.58□□□□□ -2.32
NKX2-6A6NCS4 RNA5SP347-201ENST00000362445 119 ntBASIC0.58□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.66-201ENST00000362862 102 ntBASIC0.58□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.199-201ENST00000364014 102 ntBASIC0.58□□□□□ -2.32
NKX2-6A6NCS4 RNU6-484P-201ENST00000384016 107 ntBASIC0.58□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.477-201ENST00000384352 108 ntBASIC0.58□□□□□ -2.32
NKX2-6A6NCS4 MIR608-201ENST00000384820 100 ntBASIC0.58□□□□□ -2.32
NKX2-6A6NCS4 MIR568-201ENST00000385036 95 ntBASIC0.58□□□□□ -2.32
NKX2-6A6NCS4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.58□□□□□ -2.32
NKX2-6A6NCS4 RNU6-613P-201ENST00000410412 108 ntBASIC0.58□□□□□ -2.32
NKX2-6A6NCS4 RNU2-70P-201ENST00000410718 179 ntBASIC0.58□□□□□ -2.32
NKX2-6A6NCS4 RNU6-1190P-201ENST00000410811 104 ntBASIC0.58□□□□□ -2.32
NKX2-6A6NCS4 AC244023.1-201ENST00000426884 112 ntBASIC0.58□□□□□ -2.32
NKX2-6A6NCS4 RNU6-1299P-201ENST00000516316 100 ntBASIC0.58□□□□□ -2.32
NKX2-6A6NCS4 MIR2115-201ENST00000516657 100 ntBASIC0.58□□□□□ -2.32
NKX2-6A6NCS4 RNU11-2P-201ENST00000516898 142 ntBASIC0.58□□□□□ -2.32
NKX2-6A6NCS4 AC242498.1-201ENST00000604134 111 ntBASIC0.58□□□□□ -2.32
NKX2-6A6NCS4 uc_338.6-201ENST00000613544 171 ntBASIC0.58□□□□□ -2.32
NKX2-6A6NCS4 AC134878.1-201ENST00000619901 243 ntBASIC0.58□□□□□ -2.32
NKX2-6A6NCS4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.58□□□□□ -2.32
NKX2-6A6NCS4 MIR335-201ENST00000362173 94 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.82-201ENST00000363000 102 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.92-201ENST00000363043 102 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.235-201ENST00000364412 102 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.242-201ENST00000364473 110 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.634-201ENST00000364811 113 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.306-201ENST00000365015 102 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.312-201ENST00000365089 102 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.322-201ENST00000365151 102 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 SNORA1-201ENST00000384107 130 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 SNORD111-201ENST00000408139 94 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 SNORD99-201ENST00000408612 74 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 RNA5SP193-201ENST00000410353 107 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 SNORD83.1-201ENST00000411362 77 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 MTND2P23-201ENST00000422990 651 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 AL358176.2-201ENST00000425769 204 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 AC098934.3-201ENST00000430450 190 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 FABP5P4-201ENST00000437203 171 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.650-201ENST00000459002 102 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 AC107297.1-201ENST00000459991 176 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 RNU6-327P-201ENST00000516270 127 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.777-201ENST00000516982 102 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 MIR4662B-201ENST00000579498 81 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.771-201ENST00000598668 102 ntBASIC0.57□□□□□ -2.32
NKX2-6A6NCS4 Y_RNA.789-201ENST00000622480 102 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms