Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 MIR181B2-201ENST00000385004 89 ntBASIC-1.38□□□□□ -2.63
TRAV13-1A0A0B4J241 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.38□□□□□ -2.63
TRAV13-1A0A0B4J241 MTND2P22-201ENST00000444325 1033 ntBASIC-1.38□□□□□ -2.63
TRAV13-1A0A0B4J241 AC023449.1-201ENST00000454464 154 ntBASIC-1.38□□□□□ -2.63
TRAV13-1A0A0B4J241 AC068137.3-201ENST00000639191 341 ntBASIC-1.38□□□□□ -2.63
TRAV13-1A0A0B4J241 RNU6-626P-201ENST00000363354 107 ntBASIC-1.39□□□□□ -2.63
TRAV13-1A0A0B4J241 Y_RNA.296-201ENST00000364930 108 ntBASIC-1.39□□□□□ -2.63
TRAV13-1A0A0B4J241 RNY1P13-201ENST00000365030 105 ntBASIC-1.39□□□□□ -2.63
TRAV13-1A0A0B4J241 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.39□□□□□ -2.63
TRAV13-1A0A0B4J241 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.39□□□□□ -2.63
TRAV13-1A0A0B4J241 MTND2P9-201ENST00000422293 931 ntBASIC-1.39□□□□□ -2.63
TRAV13-1A0A0B4J241 SNORD5.1-201ENST00000458800 75 ntBASIC-1.39□□□□□ -2.63
TRAV13-1A0A0B4J241 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.39□□□□□ -2.63
TRAV13-1A0A0B4J241 MIR4473-201ENST00000583731 91 ntBASIC-1.39□□□□□ -2.63
TRAV13-1A0A0B4J241 AC087588.2-201ENST00000617667 426 ntBASIC-1.39□□□□□ -2.63
TRAV13-1A0A0B4J241 MIR302B-201ENST00000362188 73 ntBASIC-1.4□□□□□ -2.63
TRAV13-1A0A0B4J241 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.4□□□□□ -2.63
TRAV13-1A0A0B4J241 Y_RNA.481-201ENST00000384373 102 ntBASIC-1.4□□□□□ -2.63
TRAV13-1A0A0B4J241 MIR548A2-201ENST00000384956 97 ntBASIC-1.4□□□□□ -2.63
TRAV13-1A0A0B4J241 RNU6-1068P-201ENST00000410958 103 ntBASIC-1.4□□□□□ -2.63
TRAV13-1A0A0B4J241 SNORA13-201ENST00000458790 133 ntBASIC-1.4□□□□□ -2.63
TRAV13-1A0A0B4J241 RNU6-693P-201ENST00000516134 107 ntBASIC-1.4□□□□□ -2.63
TRAV13-1A0A0B4J241 RNU1-54P-201ENST00000517181 120 ntBASIC-1.4□□□□□ -2.63
TRAV13-1A0A0B4J241 AC005357.1-201ENST00000588399 301 ntBASIC-1.4□□□□□ -2.63
TRAV13-1A0A0B4J241 DISC2.1-201ENST00000612827 205 ntBASIC-1.4□□□□□ -2.63
TRAV13-1A0A0B4J241 MIR342-201ENST00000362212 99 ntBASIC-1.41□□□□□ -2.64
TRAV13-1A0A0B4J241 RNA5SP133-201ENST00000363368 119 ntBASIC-1.41□□□□□ -2.64
TRAV13-1A0A0B4J241 SNORD114-29-201ENST00000364819 70 ntBASIC-1.41□□□□□ -2.64
TRAV13-1A0A0B4J241 Y_RNA.414-201ENST00000384011 101 ntBASIC-1.41□□□□□ -2.64
TRAV13-1A0A0B4J241 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.41□□□□□ -2.64
TRAV13-1A0A0B4J241 AL603914.1-201ENST00000401964 204 ntBASIC-1.41□□□□□ -2.64
TRAV13-1A0A0B4J241 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.41□□□□□ -2.64
TRAV13-1A0A0B4J241 RNU6-175P-201ENST00000516896 107 ntBASIC-1.41□□□□□ -2.64
TRAV13-1A0A0B4J241 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.41□□□□□ -2.64
TRAV13-1A0A0B4J241 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.41□□□□□ -2.64
TRAV13-1A0A0B4J241 uc_338.10-201ENST00000621872 182 ntBASIC-1.41□□□□□ -2.64
TRAV13-1A0A0B4J241 MIR6086-201ENST00000638065 55 ntBASIC-1.41□□□□□ -2.64
TRAV13-1A0A0B4J241 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.42□□□□□ -2.64
TRAV13-1A0A0B4J241 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.42□□□□□ -2.64
TRAV13-1A0A0B4J241 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.42□□□□□ -2.64
TRAV13-1A0A0B4J241 SNORD56B-201ENST00000384713 71 ntBASIC-1.42□□□□□ -2.64
TRAV13-1A0A0B4J241 AC024067.1-201ENST00000426199 223 ntBASIC-1.42□□□□□ -2.64
TRAV13-1A0A0B4J241 RNU7-141P-201ENST00000459304 62 ntBASIC-1.42□□□□□ -2.64
TRAV13-1A0A0B4J241 AC009094.1-201ENST00000564443 426 ntBASIC-1.42□□□□□ -2.64
TRAV13-1A0A0B4J241 MIR4280-201ENST00000582178 76 ntBASIC-1.42□□□□□ -2.64
TRAV13-1A0A0B4J241 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.42□□□□□ -2.64
TRAV13-1A0A0B4J241 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.43□□□□□ -2.64
TRAV13-1A0A0B4J241 SNORD24-201ENST00000383884 75 ntBASIC-1.43□□□□□ -2.64
TRAV13-1A0A0B4J241 Y_RNA.409-201ENST00000383990 98 ntBASIC-1.43□□□□□ -2.64
TRAV13-1A0A0B4J241 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.43□□□□□ -2.64
TRAV13-1A0A0B4J241 RNU5A-2P-201ENST00000384337 116 ntBASIC-1.43□□□□□ -2.64
TRAV13-1A0A0B4J241 RNU6-901P-201ENST00000384593 106 ntBASIC-1.43□□□□□ -2.64
TRAV13-1A0A0B4J241 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.43□□□□□ -2.64
TRAV13-1A0A0B4J241 SNORD115-47-201ENST00000391226 86 ntBASIC-1.43□□□□□ -2.64
TRAV13-1A0A0B4J241 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.43□□□□□ -2.64
TRAV13-1A0A0B4J241 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.43□□□□□ -2.64
TRAV13-1A0A0B4J241 AC022960.3-201ENST00000619794 441 ntBASIC-1.43□□□□□ -2.64
TRAV13-1A0A0B4J241 RNU1-141P-201ENST00000364623 158 ntBASIC-1.44□□□□□ -2.64
TRAV13-1A0A0B4J241 MIR539-201ENST00000365690 78 ntBASIC-1.44□□□□□ -2.64
TRAV13-1A0A0B4J241 SNORA18-201ENST00000384416 132 ntBASIC-1.44□□□□□ -2.64
TRAV13-1A0A0B4J241 RNU6-900P-201ENST00000384498 102 ntBASIC-1.44□□□□□ -2.64
TRAV13-1A0A0B4J241 AC074085.1-201ENST00000413598 418 ntBASIC-1.44□□□□□ -2.64
TRAV13-1A0A0B4J241 MTND1P2-201ENST00000430604 821 ntBASIC-1.44□□□□□ -2.64
TRAV13-1A0A0B4J241 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.44□□□□□ -2.64
TRAV13-1A0A0B4J241 RNA5SP395-201ENST00000516567 118 ntBASIC-1.44□□□□□ -2.64
TRAV13-1A0A0B4J241 RN7SKP295-201ENST00000517264 153 ntBASIC-1.44□□□□□ -2.64
TRAV13-1A0A0B4J241 MIR548H5-201ENST00000580314 60 ntBASIC-1.44□□□□□ -2.64
TRAV13-1A0A0B4J241 DEFB117-201ENST00000602356 141 ntBASIC-1.44□□□□□ -2.64
TRAV13-1A0A0B4J241 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.44□□□□□ -2.64
TRAV13-1A0A0B4J241 MIR6851-201ENST00000617060 67 ntBASIC-1.44□□□□□ -2.64
TRAV13-1A0A0B4J241 Z69908.1-201ENST00000622603 247 ntBASIC-1.44□□□□□ -2.64
TRAV13-1A0A0B4J241 RNU6-502P-201ENST00000362419 108 ntBASIC-1.45□□□□□ -2.64
TRAV13-1A0A0B4J241 SNORD114-25-201ENST00000363742 72 ntBASIC-1.45□□□□□ -2.64
TRAV13-1A0A0B4J241 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.45□□□□□ -2.64
TRAV13-1A0A0B4J241 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.45□□□□□ -2.64
TRAV13-1A0A0B4J241 MTND4P28-201ENST00000426217 387 ntBASIC-1.45□□□□□ -2.64
TRAV13-1A0A0B4J241 RNU7-74P-201ENST00000459104 62 ntBASIC-1.45□□□□□ -2.64
TRAV13-1A0A0B4J241 AL021707.8-201ENST00000609428 183 ntBASIC-1.45□□□□□ -2.64
TRAV13-1A0A0B4J241 MIR6128-201ENST00000615528 109 ntBASIC-1.45□□□□□ -2.64
TRAV13-1A0A0B4J241 U6.109-201ENST00000636749 87 ntBASIC-1.45□□□□□ -2.64
TRAV13-1A0A0B4J241 SNORD61-201ENST00000384252 73 ntBASIC-1.46□□□□□ -2.64
TRAV13-1A0A0B4J241 AL365203.2-201ENST00000423444 196 ntBASIC-1.46□□□□□ -2.64
TRAV13-1A0A0B4J241 SNORD38.3-201ENST00000516599 73 ntBASIC-1.46□□□□□ -2.64
TRAV13-1A0A0B4J241 MIR4662B-201ENST00000579498 81 ntBASIC-1.46□□□□□ -2.64
TRAV13-1A0A0B4J241 MIR3942-201ENST00000585264 109 ntBASIC-1.46□□□□□ -2.64
TRAV13-1A0A0B4J241 MIR6841-201ENST00000637129 72 ntBASIC-1.46□□□□□ -2.64
TRAV13-1A0A0B4J241 RNU6-888P-201ENST00000363010 101 ntBASIC-1.47□□□□□ -2.64
TRAV13-1A0A0B4J241 RNY3P5-201ENST00000384127 102 ntBASIC-1.47□□□□□ -2.64
TRAV13-1A0A0B4J241 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.47□□□□□ -2.64
TRAV13-1A0A0B4J241 AL160004.2-201ENST00000432935 350 ntBASIC-1.47□□□□□ -2.64
TRAV13-1A0A0B4J241 AF228730.3-201ENST00000436691 102 ntBASIC-1.47□□□□□ -2.64
TRAV13-1A0A0B4J241 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.47□□□□□ -2.64
TRAV13-1A0A0B4J241 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.47□□□□□ -2.64
TRAV13-1A0A0B4J241 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.47□□□□□ -2.64
TRAV13-1A0A0B4J241 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.47□□□□□ -2.64
TRAV13-1A0A0B4J241 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.47□□□□□ -2.64
TRAV13-1A0A0B4J241 MIR3920-201ENST00000581751 86 ntBASIC-1.47□□□□□ -2.64
TRAV13-1A0A0B4J241 MIR6738-201ENST00000619620 64 ntBASIC-1.47□□□□□ -2.64
TRAV13-1A0A0B4J241 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.47□□□□□ -2.65
TRAV13-1A0A0B4J241 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.48□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 260.3 ms