Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RNU6-766P-201ENST00000362478 107 ntBASIC1.84□□□□□ -2.11
CCDC187A0A096LP49 SNORD68-201ENST00000363214 84 ntBASIC1.84□□□□□ -2.11
CCDC187A0A096LP49 U8.5-201ENST00000364528 136 ntBASIC1.84□□□□□ -2.11
CCDC187A0A096LP49 RNA5SP138-201ENST00000365098 114 ntBASIC1.84□□□□□ -2.11
CCDC187A0A096LP49 MIR522-201ENST00000385071 87 ntBASIC1.84□□□□□ -2.11
CCDC187A0A096LP49 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CCDC187A0A096LP49 SNORA12.1-201ENST00000390873 148 ntBASIC1.84□□□□□ -2.11
CCDC187A0A096LP49 MIR1302-4-201ENST00000408701 150 ntBASIC1.84□□□□□ -2.11
CCDC187A0A096LP49 RNA5SP338-201ENST00000410495 85 ntBASIC1.84□□□□□ -2.11
CCDC187A0A096LP49 AC108667.1-201ENST00000428618 249 ntBASIC1.84□□□□□ -2.11
CCDC187A0A096LP49 RPS26P48-201ENST00000491713 339 ntBASIC1.84□□□□□ -2.11
CCDC187A0A096LP49 RNU6-1053P-201ENST00000515930 101 ntBASIC1.84□□□□□ -2.11
CCDC187A0A096LP49 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.84□□□□□ -2.11
CCDC187A0A096LP49 RNU6-844P-201ENST00000517175 102 ntBASIC1.84□□□□□ -2.11
CCDC187A0A096LP49 MIR5089-201ENST00000580047 84 ntBASIC1.84□□□□□ -2.11
CCDC187A0A096LP49 MIR5197-201ENST00000583721 112 ntBASIC1.84□□□□□ -2.11
CCDC187A0A096LP49 AC087685.1-201ENST00000587507 141 ntBASIC1.84□□□□□ -2.11
CCDC187A0A096LP49 RNU6-94P-201ENST00000607728 107 ntBASIC1.84□□□□□ -2.11
CCDC187A0A096LP49 AP001318.4-201ENST00000616637 121 ntBASIC1.84□□□□□ -2.11
CCDC187A0A096LP49 AC106754.2-201ENST00000623006 233 ntBASIC1.84□□□□□ -2.11
CCDC187A0A096LP49 RNU6-661P-201ENST00000362409 107 ntBASIC1.83□□□□□ -2.12
CCDC187A0A096LP49 Y_RNA.163-201ENST00000363702 113 ntBASIC1.83□□□□□ -2.12
CCDC187A0A096LP49 Y_RNA.323-201ENST00000365157 109 ntBASIC1.83□□□□□ -2.12
CCDC187A0A096LP49 SNORD12C-201ENST00000386307 89 ntBASIC1.83□□□□□ -2.12
CCDC187A0A096LP49 MT-TI-201ENST00000387365 69 ntBASIC1.83□□□□□ -2.12
CCDC187A0A096LP49 SNRPGP14-201ENST00000435400 219 ntBASIC1.83□□□□□ -2.12
CCDC187A0A096LP49 SNRPGP13-201ENST00000442212 177 ntBASIC1.83□□□□□ -2.12
CCDC187A0A096LP49 RNU6-717P-201ENST00000459076 104 ntBASIC1.83□□□□□ -2.12
CCDC187A0A096LP49 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.83□□□□□ -2.12
CCDC187A0A096LP49 RNU6-412P-201ENST00000516434 106 ntBASIC1.83□□□□□ -2.12
CCDC187A0A096LP49 AC103810.8-201ENST00000607347 118 ntBASIC1.83□□□□□ -2.12
CCDC187A0A096LP49 AL137067.1-201ENST00000615933 120 ntBASIC1.83□□□□□ -2.12
CCDC187A0A096LP49 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC187A0A096LP49 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
CCDC187A0A096LP49 U8.6-201ENST00000364939 135 ntBASIC1.82□□□□□ -2.12
CCDC187A0A096LP49 RNU6-693P-201ENST00000516134 107 ntBASIC1.82□□□□□ -2.12
CCDC187A0A096LP49 SNORA25.15-201ENST00000516487 89 ntBASIC1.82□□□□□ -2.12
CCDC187A0A096LP49 AC021506.2-201ENST00000612354 169 ntBASIC1.82□□□□□ -2.12
CCDC187A0A096LP49 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CCDC187A0A096LP49 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CCDC187A0A096LP49 RNU6-349P-201ENST00000362402 107 ntBASIC1.81□□□□□ -2.12
CCDC187A0A096LP49 RNU6-1014P-201ENST00000383940 103 ntBASIC1.81□□□□□ -2.12
CCDC187A0A096LP49 SNORA51.10-201ENST00000384418 136 ntBASIC1.81□□□□□ -2.12
CCDC187A0A096LP49 AC099513.1-201ENST00000490423 301 ntBASIC1.81□□□□□ -2.12
CCDC187A0A096LP49 RNU1-40P-201ENST00000516816 164 ntBASIC1.81□□□□□ -2.12
CCDC187A0A096LP49 RNU1-97P-201ENST00000516872 164 ntBASIC1.81□□□□□ -2.12
CCDC187A0A096LP49 SNORA44.1-201ENST00000517031 108 ntBASIC1.81□□□□□ -2.12
CCDC187A0A096LP49 AC006441.5-201ENST00000612680 209 ntBASIC1.81□□□□□ -2.12
CCDC187A0A096LP49 AL513423.1-201ENST00000621695 132 ntBASIC1.81□□□□□ -2.12
CCDC187A0A096LP49 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.81□□□□□ -2.12
CCDC187A0A096LP49 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CCDC187A0A096LP49 RNU6-414P-201ENST00000363705 104 ntBASIC1.8□□□□□ -2.12
CCDC187A0A096LP49 Y_RNA.198-201ENST00000364013 98 ntBASIC1.8□□□□□ -2.12
CCDC187A0A096LP49 SNORD73B-201ENST00000364394 72 ntBASIC1.8□□□□□ -2.12
CCDC187A0A096LP49 Y_RNA.242-201ENST00000364473 110 ntBASIC1.8□□□□□ -2.12
CCDC187A0A096LP49 RNA5SP160-201ENST00000364866 120 ntBASIC1.8□□□□□ -2.12
CCDC187A0A096LP49 RNA5SP190-201ENST00000365222 118 ntBASIC1.8□□□□□ -2.12
CCDC187A0A096LP49 RNU6-756P-201ENST00000383997 107 ntBASIC1.8□□□□□ -2.12
CCDC187A0A096LP49 RNU6-49P-201ENST00000384256 107 ntBASIC1.8□□□□□ -2.12
CCDC187A0A096LP49 RNU6-424P-201ENST00000384367 105 ntBASIC1.8□□□□□ -2.12
CCDC187A0A096LP49 RNY4P30-201ENST00000410216 95 ntBASIC1.8□□□□□ -2.12
CCDC187A0A096LP49 RNA5SP489-201ENST00000410986 109 ntBASIC1.8□□□□□ -2.12
CCDC187A0A096LP49 HMGN2P32-201ENST00000444648 269 ntBASIC1.8□□□□□ -2.12
CCDC187A0A096LP49 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC187A0A096LP49 RNU6-240P-201ENST00000516098 97 ntBASIC1.8□□□□□ -2.12
CCDC187A0A096LP49 RNA5SP168-201ENST00000516642 112 ntBASIC1.8□□□□□ -2.12
CCDC187A0A096LP49 RNA5SP364-201ENST00000516938 78 ntBASIC1.8□□□□□ -2.12
CCDC187A0A096LP49 MIR3683-201ENST00000580847 82 ntBASIC1.8□□□□□ -2.12
CCDC187A0A096LP49 snoU13.31-201ENST00000607291 104 ntBASIC1.8□□□□□ -2.12
CCDC187A0A096LP49 AC084768.2-201ENST00000622736 221 ntBASIC1.8□□□□□ -2.12
CCDC187A0A096LP49 AL442644.1-201ENST00000454390 3105 ntBASIC1.8□□□□□ -2.12
CCDC187A0A096LP49 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CCDC187A0A096LP49 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CCDC187A0A096LP49 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
CCDC187A0A096LP49 MIRLET7C-201ENST00000362160 84 ntBASIC1.79□□□□□ -2.12
CCDC187A0A096LP49 MIR378A-201ENST00000362177 66 ntBASIC1.79□□□□□ -2.12
CCDC187A0A096LP49 snoU2-30.1-201ENST00000365012 70 ntBASIC1.79□□□□□ -2.12
CCDC187A0A096LP49 MIR488-201ENST00000365739 83 ntBASIC1.79□□□□□ -2.12
CCDC187A0A096LP49 U8.16-201ENST00000391279 133 ntBASIC1.79□□□□□ -2.12
CCDC187A0A096LP49 RNU6-938P-201ENST00000411285 103 ntBASIC1.79□□□□□ -2.12
CCDC187A0A096LP49 AC003989.2-201ENST00000440224 169 ntBASIC1.79□□□□□ -2.12
CCDC187A0A096LP49 PGBD4P5-201ENST00000445958 426 ntBASIC1.79□□□□□ -2.12
CCDC187A0A096LP49 SNORD13-201ENST00000459299 104 ntBASIC1.79□□□□□ -2.12
CCDC187A0A096LP49 AC025033.1-201ENST00000463883 194 ntBASIC1.79□□□□□ -2.12
CCDC187A0A096LP49 RPL39P34-201ENST00000477141 156 ntBASIC1.79□□□□□ -2.12
CCDC187A0A096LP49 AC024614.2-201ENST00000577584 372 ntBASIC1.79□□□□□ -2.12
CCDC187A0A096LP49 SNRPGP19-201ENST00000603826 189 ntBASIC1.79□□□□□ -2.12
CCDC187A0A096LP49 AC012493.3-201ENST00000604494 112 ntBASIC1.79□□□□□ -2.12
CCDC187A0A096LP49 AC027279.3-201ENST00000625055 122 ntBASIC1.79□□□□□ -2.12
CCDC187A0A096LP49 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.79□□□□□ -2.12
CCDC187A0A096LP49 MIR424-201ENST00000362227 98 ntBASIC1.78□□□□□ -2.12
CCDC187A0A096LP49 RNU6-1084P-201ENST00000362498 107 ntBASIC1.78□□□□□ -2.12
CCDC187A0A096LP49 Y_RNA.362-201ENST00000365518 110 ntBASIC1.78□□□□□ -2.12
CCDC187A0A096LP49 Y_RNA.410-201ENST00000383992 113 ntBASIC1.78□□□□□ -2.12
CCDC187A0A096LP49 SNORA51.5-201ENST00000384126 131 ntBASIC1.78□□□□□ -2.12
CCDC187A0A096LP49 SNORA17.3-201ENST00000391159 129 ntBASIC1.78□□□□□ -2.12
CCDC187A0A096LP49 MIR548O-201ENST00000408583 114 ntBASIC1.78□□□□□ -2.12
CCDC187A0A096LP49 JTBP1-201ENST00000441314 247 ntBASIC1.78□□□□□ -2.12
CCDC187A0A096LP49 RNU6-830P-201ENST00000516353 107 ntBASIC1.78□□□□□ -2.12
CCDC187A0A096LP49 RNY4P20-201ENST00000516678 93 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms