Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RNU2-13P-201ENST00000515909 113 ntBASIC0.47□□□□□ -2.33
TM9SF3Q9HD45 MIR8087-201ENST00000612745 78 ntBASIC0.47□□□□□ -2.33
TM9SF3Q9HD45 AC013791.1-201ENST00000616619 62 ntBASIC0.47□□□□□ -2.33
TM9SF3Q9HD45 MIR1-1-201ENST00000362147 71 ntBASIC0.46□□□□□ -2.34
TM9SF3Q9HD45 Y_RNA.30-201ENST00000362572 97 ntBASIC0.46□□□□□ -2.34
TM9SF3Q9HD45 Y_RNA.293-201ENST00000364908 93 ntBASIC0.46□□□□□ -2.34
TM9SF3Q9HD45 Y_RNA.374-201ENST00000365606 101 ntBASIC0.46□□□□□ -2.34
TM9SF3Q9HD45 SNORA22B-201ENST00000383876 138 ntBASIC0.46□□□□□ -2.34
TM9SF3Q9HD45 Y_RNA.527-201ENST00000384573 102 ntBASIC0.46□□□□□ -2.34
TM9SF3Q9HD45 Y_RNA.581-201ENST00000391017 97 ntBASIC0.46□□□□□ -2.34
TM9SF3Q9HD45 RNU6-101P-201ENST00000410323 104 ntBASIC0.46□□□□□ -2.34
TM9SF3Q9HD45 RNU6-847P-201ENST00000411115 108 ntBASIC0.46□□□□□ -2.34
TM9SF3Q9HD45 AC091959.1-201ENST00000495857 238 ntBASIC0.46□□□□□ -2.34
TM9SF3Q9HD45 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.46□□□□□ -2.34
TM9SF3Q9HD45 AL021707.8-201ENST00000609428 183 ntBASIC0.46□□□□□ -2.34
TM9SF3Q9HD45 uc_338.4-201ENST00000616635 176 ntBASIC0.46□□□□□ -2.34
TM9SF3Q9HD45 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
TM9SF3Q9HD45 MIR330-201ENST00000362196 94 ntBASIC0.45□□□□□ -2.34
TM9SF3Q9HD45 Y_RNA.64-201ENST00000362845 102 ntBASIC0.45□□□□□ -2.34
TM9SF3Q9HD45 Y_RNA.168-201ENST00000363740 102 ntBASIC0.45□□□□□ -2.34
TM9SF3Q9HD45 Y_RNA.241-201ENST00000364470 117 ntBASIC0.45□□□□□ -2.34
TM9SF3Q9HD45 RNU6-290P-201ENST00000365212 101 ntBASIC0.45□□□□□ -2.34
TM9SF3Q9HD45 RNU6-1248P-201ENST00000391096 64 ntBASIC0.45□□□□□ -2.34
TM9SF3Q9HD45 MIR1252-201ENST00000408861 65 ntBASIC0.45□□□□□ -2.34
TM9SF3Q9HD45 AC244023.1-201ENST00000426884 112 ntBASIC0.45□□□□□ -2.34
TM9SF3Q9HD45 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.45□□□□□ -2.34
TM9SF3Q9HD45 RNY3P15-201ENST00000516297 97 ntBASIC0.45□□□□□ -2.34
TM9SF3Q9HD45 MIR4771-2-201ENST00000577758 74 ntBASIC0.45□□□□□ -2.34
TM9SF3Q9HD45 MIR5692C2-201ENST00000577959 77 ntBASIC0.45□□□□□ -2.34
TM9SF3Q9HD45 MIR4771-1-201ENST00000582617 74 ntBASIC0.45□□□□□ -2.34
TM9SF3Q9HD45 AC242498.1-201ENST00000604134 111 ntBASIC0.45□□□□□ -2.34
TM9SF3Q9HD45 AL008718.3-201ENST00000610217 321 ntBASIC0.45□□□□□ -2.34
TM9SF3Q9HD45 Y_RNA.28-201ENST00000362554 111 ntBASIC0.44□□□□□ -2.34
TM9SF3Q9HD45 RNU6-1272P-201ENST00000362776 107 ntBASIC0.44□□□□□ -2.34
TM9SF3Q9HD45 Y_RNA.210-201ENST00000364161 110 ntBASIC0.44□□□□□ -2.34
TM9SF3Q9HD45 Y_RNA.214-201ENST00000364201 112 ntBASIC0.44□□□□□ -2.34
TM9SF3Q9HD45 VTRNA1-3-201ENST00000365645 89 ntBASIC0.44□□□□□ -2.34
TM9SF3Q9HD45 SNORA50A-201ENST00000384225 134 ntBASIC0.44□□□□□ -2.34
TM9SF3Q9HD45 Y_RNA.486-201ENST00000384398 107 ntBASIC0.44□□□□□ -2.34
TM9SF3Q9HD45 RNU6-1237P-201ENST00000384777 107 ntBASIC0.44□□□□□ -2.34
TM9SF3Q9HD45 RNU6-913P-201ENST00000390913 95 ntBASIC0.44□□□□□ -2.34
TM9SF3Q9HD45 HMGN1P33-201ENST00000432945 451 ntBASIC0.44□□□□□ -2.34
TM9SF3Q9HD45 RNU6-958P-201ENST00000516995 106 ntBASIC0.44□□□□□ -2.34
TM9SF3Q9HD45 AC131281.1-201ENST00000522984 164 ntBASIC0.44□□□□□ -2.34
TM9SF3Q9HD45 MIR367-201ENST00000362299 68 ntBASIC0.43□□□□□ -2.34
TM9SF3Q9HD45 Y_RNA.14-201ENST00000362415 103 ntBASIC0.43□□□□□ -2.34
TM9SF3Q9HD45 RNU6-934P-201ENST00000365154 107 ntBASIC0.43□□□□□ -2.34
TM9SF3Q9HD45 SNORA1.2-201ENST00000365189 134 ntBASIC0.43□□□□□ -2.34
TM9SF3Q9HD45 SNORA63.7-201ENST00000365579 123 ntBASIC0.43□□□□□ -2.34
TM9SF3Q9HD45 RNU6-716P-201ENST00000365621 103 ntBASIC0.43□□□□□ -2.34
TM9SF3Q9HD45 MIR520F-201ENST00000384824 87 ntBASIC0.43□□□□□ -2.34
TM9SF3Q9HD45 MIR548A2-201ENST00000384956 97 ntBASIC0.43□□□□□ -2.34
TM9SF3Q9HD45 MIR520H-201ENST00000385126 88 ntBASIC0.43□□□□□ -2.34
TM9SF3Q9HD45 RNU6-938P-201ENST00000411285 103 ntBASIC0.43□□□□□ -2.34
TM9SF3Q9HD45 MTND4LP11-201ENST00000422184 280 ntBASIC0.43□□□□□ -2.34
TM9SF3Q9HD45 RNU7-67P-201ENST00000459003 62 ntBASIC0.43□□□□□ -2.34
TM9SF3Q9HD45 SNORA40.15-201ENST00000516884 107 ntBASIC0.43□□□□□ -2.34
TM9SF3Q9HD45 RNU2-31P-201ENST00000516954 155 ntBASIC0.43□□□□□ -2.34
TM9SF3Q9HD45 SCARNA24.2-201ENST00000516968 130 ntBASIC0.43□□□□□ -2.34
TM9SF3Q9HD45 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.43□□□□□ -2.34
TM9SF3Q9HD45 AC020891.4-201ENST00000605745 93 ntBASIC0.43□□□□□ -2.34
TM9SF3Q9HD45 AC134878.1-201ENST00000619901 243 ntBASIC0.43□□□□□ -2.34
TM9SF3Q9HD45 AL160413.1-201ENST00000622780 310 ntBASIC0.43□□□□□ -2.34
TM9SF3Q9HD45 snoU18.1-201ENST00000629629 71 ntBASIC0.43□□□□□ -2.34
TM9SF3Q9HD45 SNORA25.1-201ENST00000362326 128 ntBASIC0.42□□□□□ -2.34
TM9SF3Q9HD45 Y_RNA.19-201ENST00000362462 99 ntBASIC0.42□□□□□ -2.34
TM9SF3Q9HD45 RNU6-770P-201ENST00000363929 105 ntBASIC0.42□□□□□ -2.34
TM9SF3Q9HD45 Y_RNA.380-201ENST00000365663 111 ntBASIC0.42□□□□□ -2.34
TM9SF3Q9HD45 RNU6-144P-201ENST00000383951 107 ntBASIC0.42□□□□□ -2.34
TM9SF3Q9HD45 Y_RNA.587-201ENST00000391210 103 ntBASIC0.42□□□□□ -2.34
TM9SF3Q9HD45 AC022028.1-201ENST00000412054 408 ntBASIC0.42□□□□□ -2.34
TM9SF3Q9HD45 Y_RNA.631-201ENST00000459607 101 ntBASIC0.42□□□□□ -2.34
TM9SF3Q9HD45 SCARNA8-201ENST00000515924 131 ntBASIC0.42□□□□□ -2.34
TM9SF3Q9HD45 RNU6-977P-201ENST00000516411 103 ntBASIC0.42□□□□□ -2.34
TM9SF3Q9HD45 SNORA18.4-201ENST00000516440 124 ntBASIC0.42□□□□□ -2.34
TM9SF3Q9HD45 SNORD36C-201ENST00000516733 66 ntBASIC0.42□□□□□ -2.34
TM9SF3Q9HD45 RNU6-1137P-201ENST00000517073 99 ntBASIC0.42□□□□□ -2.34
TM9SF3Q9HD45 RNU6-1270P-201ENST00000517128 108 ntBASIC0.42□□□□□ -2.34
TM9SF3Q9HD45 MIR6740-201ENST00000618268 113 ntBASIC0.42□□□□□ -2.34
TM9SF3Q9HD45 AL109933.3-201ENST00000619095 188 ntBASIC0.42□□□□□ -2.34
TM9SF3Q9HD45 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
TM9SF3Q9HD45 Y_RNA.431-201ENST00000384086 102 ntBASIC0.41□□□□□ -2.34
TM9SF3Q9HD45 MIR518F-201ENST00000384973 87 ntBASIC0.41□□□□□ -2.34
TM9SF3Q9HD45 RNU6-1190P-201ENST00000410811 104 ntBASIC0.41□□□□□ -2.34
TM9SF3Q9HD45 AL138752.1-201ENST00000452964 351 ntBASIC0.41□□□□□ -2.34
TM9SF3Q9HD45 RNU7-62P-201ENST00000458856 62 ntBASIC0.41□□□□□ -2.34
TM9SF3Q9HD45 RNU6-693P-201ENST00000516134 107 ntBASIC0.41□□□□□ -2.34
TM9SF3Q9HD45 RN7SKP12-201ENST00000516275 143 ntBASIC0.41□□□□□ -2.34
TM9SF3Q9HD45 RNU6-1007P-201ENST00000516586 107 ntBASIC0.41□□□□□ -2.34
TM9SF3Q9HD45 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.41□□□□□ -2.34
TM9SF3Q9HD45 MIR4724-201ENST00000579485 89 ntBASIC0.41□□□□□ -2.34
TM9SF3Q9HD45 AL355297.3-201ENST00000604082 446 ntBASIC0.41□□□□□ -2.34
TM9SF3Q9HD45 AP000753.3-201ENST00000604083 169 ntBASIC0.41□□□□□ -2.34
TM9SF3Q9HD45 AC010332.2-201ENST00000613083 1904 ntBASIC0.4□□□□□ -2.34
TM9SF3Q9HD45 Y_RNA.24-201ENST00000362508 103 ntBASIC0.4□□□□□ -2.35
TM9SF3Q9HD45 Y_RNA.117-201ENST00000363294 101 ntBASIC0.4□□□□□ -2.35
TM9SF3Q9HD45 SNORD115-28-201ENST00000363931 81 ntBASIC0.4□□□□□ -2.35
TM9SF3Q9HD45 Y_RNA.217-201ENST00000364214 105 ntBASIC0.4□□□□□ -2.35
TM9SF3Q9HD45 RNU6-580P-201ENST00000365159 107 ntBASIC0.4□□□□□ -2.35
TM9SF3Q9HD45 RNU6-1138P-201ENST00000365359 106 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 188.9 ms