Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RNU6-199P-201ENST00000362954 107 ntBASIC1.68□□□□□ -2.14
USP29Q9HBJ7 RNU4-11P-201ENST00000365287 132 ntBASIC1.68□□□□□ -2.14
USP29Q9HBJ7 SNORD38C-201ENST00000384381 69 ntBASIC1.68□□□□□ -2.14
USP29Q9HBJ7 SNORD77.3-201ENST00000391113 65 ntBASIC1.68□□□□□ -2.14
USP29Q9HBJ7 MIR1267-201ENST00000408723 78 ntBASIC1.68□□□□□ -2.14
USP29Q9HBJ7 RNU6-938P-201ENST00000411285 103 ntBASIC1.68□□□□□ -2.14
USP29Q9HBJ7 BTF3P4-201ENST00000418852 495 ntBASIC1.68□□□□□ -2.14
USP29Q9HBJ7 AF228730.3-201ENST00000436691 102 ntBASIC1.68□□□□□ -2.14
USP29Q9HBJ7 RNU7-197P-201ENST00000458836 62 ntBASIC1.68□□□□□ -2.14
USP29Q9HBJ7 RNU6-917P-201ENST00000516294 104 ntBASIC1.68□□□□□ -2.14
USP29Q9HBJ7 Y_RNA.703-201ENST00000516846 111 ntBASIC1.68□□□□□ -2.14
USP29Q9HBJ7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.68□□□□□ -2.14
USP29Q9HBJ7 MIR6844-201ENST00000637122 62 ntBASIC1.68□□□□□ -2.14
USP29Q9HBJ7 MIR302D-201ENST00000362275 68 ntBASIC1.67□□□□□ -2.14
USP29Q9HBJ7 SNORD115-28-201ENST00000363931 81 ntBASIC1.67□□□□□ -2.14
USP29Q9HBJ7 Y_RNA.215-201ENST00000364204 112 ntBASIC1.67□□□□□ -2.14
USP29Q9HBJ7 SNORA25.7-201ENST00000364375 127 ntBASIC1.67□□□□□ -2.14
USP29Q9HBJ7 Y_RNA.251-201ENST00000364551 99 ntBASIC1.67□□□□□ -2.14
USP29Q9HBJ7 RNU6-1292P-201ENST00000383856 107 ntBASIC1.67□□□□□ -2.14
USP29Q9HBJ7 Y_RNA.542-201ENST00000384641 111 ntBASIC1.67□□□□□ -2.14
USP29Q9HBJ7 MIR513A1-201ENST00000385138 129 ntBASIC1.67□□□□□ -2.14
USP29Q9HBJ7 MIR516B2-201ENST00000385190 85 ntBASIC1.67□□□□□ -2.14
USP29Q9HBJ7 MIR653-201ENST00000385279 96 ntBASIC1.67□□□□□ -2.14
USP29Q9HBJ7 SNORA75.5-201ENST00000391291 81 ntBASIC1.67□□□□□ -2.14
USP29Q9HBJ7 MIR548M-201ENST00000408260 86 ntBASIC1.67□□□□□ -2.14
USP29Q9HBJ7 RNU6-588P-201ENST00000410281 105 ntBASIC1.67□□□□□ -2.14
USP29Q9HBJ7 AP1B1P2-201ENST00000416196 106 ntBASIC1.67□□□□□ -2.14
USP29Q9HBJ7 MIR3129-201ENST00000581095 76 ntBASIC1.67□□□□□ -2.14
USP29Q9HBJ7 AL512598.1-201ENST00000610158 273 ntBASIC1.67□□□□□ -2.14
USP29Q9HBJ7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.67□□□□□ -2.14
USP29Q9HBJ7 MIR376A2-201ENST00000636782 80 ntBASIC1.67□□□□□ -2.14
USP29Q9HBJ7 Y_RNA.37-201ENST00000362606 108 ntBASIC1.66□□□□□ -2.14
USP29Q9HBJ7 RNU6-187P-201ENST00000384139 106 ntBASIC1.66□□□□□ -2.14
USP29Q9HBJ7 MIR499A-201ENST00000384903 122 ntBASIC1.66□□□□□ -2.14
USP29Q9HBJ7 MIR136-201ENST00000385207 82 ntBASIC1.66□□□□□ -2.14
USP29Q9HBJ7 MIR624-201ENST00000385217 97 ntBASIC1.66□□□□□ -2.14
USP29Q9HBJ7 AC005908.1-201ENST00000468701 347 ntBASIC1.66□□□□□ -2.14
USP29Q9HBJ7 TRMT112P2-201ENST00000512910 132 ntBASIC1.66□□□□□ -2.14
USP29Q9HBJ7 AL359821.1-201ENST00000605519 182 ntBASIC1.66□□□□□ -2.14
USP29Q9HBJ7 AC015726.2-201ENST00000620112 122 ntBASIC1.66□□□□□ -2.14
USP29Q9HBJ7 AC106754.2-201ENST00000623006 233 ntBASIC1.66□□□□□ -2.14
USP29Q9HBJ7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.66□□□□□ -2.14
USP29Q9HBJ7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.65□□□□□ -2.14
USP29Q9HBJ7 SNORA25.9-201ENST00000365087 128 ntBASIC1.65□□□□□ -2.15
USP29Q9HBJ7 SNORA2.2-201ENST00000365473 135 ntBASIC1.65□□□□□ -2.15
USP29Q9HBJ7 MIR569-201ENST00000385228 96 ntBASIC1.65□□□□□ -2.15
USP29Q9HBJ7 RNU6-321P-201ENST00000410912 106 ntBASIC1.65□□□□□ -2.15
USP29Q9HBJ7 snoU13.9-201ENST00000458927 103 ntBASIC1.65□□□□□ -2.15
USP29Q9HBJ7 AC092991.1-201ENST00000477176 376 ntBASIC1.65□□□□□ -2.15
USP29Q9HBJ7 DNAJC19P9-201ENST00000555084 351 ntBASIC1.65□□□□□ -2.15
USP29Q9HBJ7 AC112693.2-201ENST00000556538 232 ntBASIC1.65□□□□□ -2.15
USP29Q9HBJ7 AC134878.1-201ENST00000619901 243 ntBASIC1.65□□□□□ -2.15
USP29Q9HBJ7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
USP29Q9HBJ7 ICE2P2-201ENST00000483823 2787 ntBASIC1.64□□□□□ -2.15
USP29Q9HBJ7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
USP29Q9HBJ7 Y_RNA.497-201ENST00000384447 98 ntBASIC1.64□□□□□ -2.15
USP29Q9HBJ7 Y_RNA.508-201ENST00000384502 114 ntBASIC1.64□□□□□ -2.15
USP29Q9HBJ7 RNU4-62P-201ENST00000410125 130 ntBASIC1.64□□□□□ -2.15
USP29Q9HBJ7 RNA5SP127-201ENST00000411051 133 ntBASIC1.64□□□□□ -2.15
USP29Q9HBJ7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.64□□□□□ -2.15
USP29Q9HBJ7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.64□□□□□ -2.15
USP29Q9HBJ7 SNORD53B-201ENST00000577887 78 ntBASIC1.64□□□□□ -2.15
USP29Q9HBJ7 MIR548X2-201ENST00000579776 100 ntBASIC1.64□□□□□ -2.15
USP29Q9HBJ7 RNA5SP259-201ENST00000365541 109 ntBASIC1.63□□□□□ -2.15
USP29Q9HBJ7 Y_RNA.410-201ENST00000383992 113 ntBASIC1.63□□□□□ -2.15
USP29Q9HBJ7 SNORD37.2-201ENST00000391075 66 ntBASIC1.63□□□□□ -2.15
USP29Q9HBJ7 U8.17-201ENST00000391292 132 ntBASIC1.63□□□□□ -2.15
USP29Q9HBJ7 AC087499.4-201ENST00000448505 178 ntBASIC1.63□□□□□ -2.15
USP29Q9HBJ7 SNORD36C-201ENST00000516733 66 ntBASIC1.63□□□□□ -2.15
USP29Q9HBJ7 FAM106DP-201ENST00000586416 501 ntBASIC1.63□□□□□ -2.15
USP29Q9HBJ7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.63□□□□□ -2.15
USP29Q9HBJ7 Y_RNA.488-201ENST00000384403 102 ntBASIC1.62□□□□□ -2.15
USP29Q9HBJ7 Y_RNA.494-201ENST00000384432 111 ntBASIC1.62□□□□□ -2.15
USP29Q9HBJ7 RNU6-997P-201ENST00000384725 107 ntBASIC1.62□□□□□ -2.15
USP29Q9HBJ7 RNU1-78P-201ENST00000391248 165 ntBASIC1.62□□□□□ -2.15
USP29Q9HBJ7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.62□□□□□ -2.15
USP29Q9HBJ7 AL392103.1-201ENST00000447000 198 ntBASIC1.62□□□□□ -2.15
USP29Q9HBJ7 SNORD123-201ENST00000459473 70 ntBASIC1.62□□□□□ -2.15
USP29Q9HBJ7 AC090049.2-201ENST00000550377 109 ntBASIC1.62□□□□□ -2.15
USP29Q9HBJ7 MIR4422-201ENST00000581938 83 ntBASIC1.62□□□□□ -2.15
USP29Q9HBJ7 MIR5197-201ENST00000583721 112 ntBASIC1.62□□□□□ -2.15
USP29Q9HBJ7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
USP29Q9HBJ7 SNORD33-201ENST00000362761 85 ntBASIC1.61□□□□□ -2.15
USP29Q9HBJ7 SNORD1A-201ENST00000364968 72 ntBASIC1.61□□□□□ -2.15
USP29Q9HBJ7 SNORD50.2-201ENST00000365465 70 ntBASIC1.61□□□□□ -2.15
USP29Q9HBJ7 Y_RNA.568-201ENST00000384742 113 ntBASIC1.61□□□□□ -2.15
USP29Q9HBJ7 SNORA18.4-201ENST00000516440 124 ntBASIC1.61□□□□□ -2.15
USP29Q9HBJ7 RNU6-426P-201ENST00000516464 97 ntBASIC1.61□□□□□ -2.15
USP29Q9HBJ7 SCARNA15-202ENST00000516881 127 ntBASIC1.61□□□□□ -2.15
USP29Q9HBJ7 SNORA74.3-201ENST00000517108 154 ntBASIC1.61□□□□□ -2.15
USP29Q9HBJ7 RNU7-181P-201ENST00000517234 74 ntBASIC1.61□□□□□ -2.15
USP29Q9HBJ7 RNU2-60P-201ENST00000517290 128 ntBASIC1.61□□□□□ -2.15
USP29Q9HBJ7 AP003484.1-201ENST00000530974 250 ntBASIC1.61□□□□□ -2.15
USP29Q9HBJ7 MIR548AR-201ENST00000582191 57 ntBASIC1.61□□□□□ -2.15
USP29Q9HBJ7 AC131055.1-201ENST00000584626 316 ntBASIC1.61□□□□□ -2.15
USP29Q9HBJ7 Y_RNA.52-201ENST00000362760 96 ntBASIC1.6□□□□□ -2.15
USP29Q9HBJ7 RNU6-1189P-201ENST00000383958 107 ntBASIC1.6□□□□□ -2.15
USP29Q9HBJ7 SNORD41-201ENST00000386967 70 ntBASIC1.6□□□□□ -2.15
USP29Q9HBJ7 SNORD28B-201ENST00000390993 75 ntBASIC1.6□□□□□ -2.15
USP29Q9HBJ7 RNU2-13P-201ENST00000515909 113 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 205.4 ms