Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 Y_RNA.604-201ENST00000410574 102 ntBASIC0.54□□□□□ -2.32
CDC42EP4Q9H3Q1 RNU6-733P-201ENST00000410759 104 ntBASIC0.54□□□□□ -2.32
CDC42EP4Q9H3Q1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.54□□□□□ -2.32
CDC42EP4Q9H3Q1 AC023449.1-201ENST00000454464 154 ntBASIC0.54□□□□□ -2.32
CDC42EP4Q9H3Q1 MTCO2P24-201ENST00000515611 426 ntBASIC0.54□□□□□ -2.32
CDC42EP4Q9H3Q1 RNU6-1143P-201ENST00000516125 104 ntBASIC0.54□□□□□ -2.32
CDC42EP4Q9H3Q1 AC007751.1-201ENST00000529260 376 ntBASIC0.54□□□□□ -2.32
CDC42EP4Q9H3Q1 MIR4724-201ENST00000579485 89 ntBASIC0.54□□□□□ -2.32
CDC42EP4Q9H3Q1 snoU18.1-201ENST00000629629 71 ntBASIC0.54□□□□□ -2.32
CDC42EP4Q9H3Q1 AC010487.4-201ENST00000637027 61 ntBASIC0.54□□□□□ -2.32
CDC42EP4Q9H3Q1 MIR367-201ENST00000362299 68 ntBASIC0.53□□□□□ -2.32
CDC42EP4Q9H3Q1 Y_RNA.14-201ENST00000362415 103 ntBASIC0.53□□□□□ -2.32
CDC42EP4Q9H3Q1 Y_RNA.84-201ENST00000363011 104 ntBASIC0.53□□□□□ -2.32
CDC42EP4Q9H3Q1 RNU6-797P-201ENST00000363101 109 ntBASIC0.53□□□□□ -2.32
CDC42EP4Q9H3Q1 Y_RNA.168-201ENST00000363740 102 ntBASIC0.53□□□□□ -2.32
CDC42EP4Q9H3Q1 SNORD45.3-201ENST00000363836 72 ntBASIC0.53□□□□□ -2.32
CDC42EP4Q9H3Q1 RNU6-580P-201ENST00000365159 107 ntBASIC0.53□□□□□ -2.32
CDC42EP4Q9H3Q1 RNU6-396P-201ENST00000365369 105 ntBASIC0.53□□□□□ -2.32
CDC42EP4Q9H3Q1 RNU6-514P-201ENST00000384208 107 ntBASIC0.53□□□□□ -2.32
CDC42EP4Q9H3Q1 Y_RNA.494-201ENST00000384432 111 ntBASIC0.53□□□□□ -2.32
CDC42EP4Q9H3Q1 SNORA2B-201ENST00000384583 137 ntBASIC0.53□□□□□ -2.32
CDC42EP4Q9H3Q1 MIR1827-201ENST00000408549 66 ntBASIC0.53□□□□□ -2.32
CDC42EP4Q9H3Q1 RPS26P5-201ENST00000418544 335 ntBASIC0.53□□□□□ -2.32
CDC42EP4Q9H3Q1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.53□□□□□ -2.32
CDC42EP4Q9H3Q1 SCARNA8-201ENST00000515924 131 ntBASIC0.53□□□□□ -2.32
CDC42EP4Q9H3Q1 Y_RNA.666-201ENST00000516187 112 ntBASIC0.53□□□□□ -2.32
CDC42EP4Q9H3Q1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.53□□□□□ -2.32
CDC42EP4Q9H3Q1 AC025627.3-201ENST00000582078 182 ntBASIC0.53□□□□□ -2.32
CDC42EP4Q9H3Q1 AC012433.1-201ENST00000588916 398 ntBASIC0.53□□□□□ -2.32
CDC42EP4Q9H3Q1 AC037487.3-201ENST00000606668 112 ntBASIC0.53□□□□□ -2.32
CDC42EP4Q9H3Q1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.53□□□□□ -2.32
CDC42EP4Q9H3Q1 AC243994.1-201ENST00000618627 109 ntBASIC0.53□□□□□ -2.32
CDC42EP4Q9H3Q1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.53□□□□□ -2.32
CDC42EP4Q9H3Q1 AC023934.1-201ENST00000574529 2389 ntBASIC0.52□□□□□ -2.33
CDC42EP4Q9H3Q1 MIR377-201ENST00000362145 69 ntBASIC0.52□□□□□ -2.33
CDC42EP4Q9H3Q1 Y_RNA.152-201ENST00000363578 100 ntBASIC0.52□□□□□ -2.33
CDC42EP4Q9H3Q1 Y_RNA.202-201ENST00000364083 110 ntBASIC0.52□□□□□ -2.33
CDC42EP4Q9H3Q1 Y_RNA.293-201ENST00000364908 93 ntBASIC0.52□□□□□ -2.33
CDC42EP4Q9H3Q1 Y_RNA.486-201ENST00000384398 107 ntBASIC0.52□□□□□ -2.33
CDC42EP4Q9H3Q1 Y_RNA.587-201ENST00000391210 103 ntBASIC0.52□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORD99-201ENST00000408612 74 ntBASIC0.52□□□□□ -2.33
CDC42EP4Q9H3Q1 RNU6-985P-201ENST00000410182 104 ntBASIC0.52□□□□□ -2.33
CDC42EP4Q9H3Q1 AL731563.1-201ENST00000442202 214 ntBASIC0.52□□□□□ -2.33
CDC42EP4Q9H3Q1 MTND5P22-201ENST00000458380 195 ntBASIC0.52□□□□□ -2.33
CDC42EP4Q9H3Q1 SERF1AP1-201ENST00000514575 187 ntBASIC0.52□□□□□ -2.33
CDC42EP4Q9H3Q1 MIR5688-201ENST00000580619 83 ntBASIC0.52□□□□□ -2.33
CDC42EP4Q9H3Q1 AC104465.1-201ENST00000611365 139 ntBASIC0.52□□□□□ -2.33
CDC42EP4Q9H3Q1 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
CDC42EP4Q9H3Q1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORD115-34-201ENST00000362441 82 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 RNU6-369P-201ENST00000362515 102 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORD115-12-201ENST00000362583 82 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORD115-29-201ENST00000362834 82 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORD115-9-201ENST00000362912 82 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORD115-21-201ENST00000362963 81 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORD115-14-201ENST00000363090 81 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORD115-13-201ENST00000363358 82 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORD115-41-201ENST00000363608 82 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORD115-11-201ENST00000363616 82 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORD115-5-201ENST00000363633 82 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORD115-39-201ENST00000363694 82 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORD115-4-201ENST00000363810 82 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORD115-16-201ENST00000363887 82 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORD115-6-201ENST00000363942 82 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORD115-42-201ENST00000364273 82 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 RNU4-10P-201ENST00000364383 140 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORD115-15-201ENST00000364809 81 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORD115-1-201ENST00000364961 82 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORD115-26-201ENST00000365067 82 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORD115-10-201ENST00000365073 81 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORA33.2-201ENST00000365413 134 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORD115-43-201ENST00000365503 82 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORD115-36-201ENST00000365629 82 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 RNU6-125P-201ENST00000384505 107 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 MIR548A2-201ENST00000384956 97 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 RNU6-994P-201ENST00000410507 111 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 RNU6-1203P-201ENST00000410703 110 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 RNU6-938P-201ENST00000411285 103 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 AC067940.1-201ENST00000458411 300 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 RNU6-1338P-201ENST00000516328 91 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 Y_RNA.701-201ENST00000516812 110 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 MIR4711-201ENST00000578274 70 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 MIR4662B-201ENST00000579498 81 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 AL356055.1-201ENST00000602528 446 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 SNORD115-40-201ENST00000606510 82 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 Y_RNA.802-201ENST00000614892 130 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 7SK.10-201ENST00000621414 298 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 MIR5087-201ENST00000635826 76 ntBASIC0.51□□□□□ -2.33
CDC42EP4Q9H3Q1 Y_RNA.275-201ENST00000364726 110 ntBASIC0.5□□□□□ -2.33
CDC42EP4Q9H3Q1 RNU6-110P-201ENST00000384508 104 ntBASIC0.5□□□□□ -2.33
CDC42EP4Q9H3Q1 MIR518F-201ENST00000384973 87 ntBASIC0.5□□□□□ -2.33
CDC42EP4Q9H3Q1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.5□□□□□ -2.33
CDC42EP4Q9H3Q1 AC090844.1-201ENST00000422019 156 ntBASIC0.5□□□□□ -2.33
CDC42EP4Q9H3Q1 snoU13.16-201ENST00000459350 104 ntBASIC0.5□□□□□ -2.33
CDC42EP4Q9H3Q1 COX6CP6-201ENST00000490840 228 ntBASIC0.5□□□□□ -2.33
CDC42EP4Q9H3Q1 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.5□□□□□ -2.33
CDC42EP4Q9H3Q1 AL136317.1-201ENST00000612653 226 ntBASIC0.5□□□□□ -2.33
CDC42EP4Q9H3Q1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 313.8 ms