Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 SNORD115-36-201ENST00000365629 82 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 Y_RNA.428-201ENST00000384078 102 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 RNU6-205P-201ENST00000390858 107 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 MIR548O-201ENST00000408583 114 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 RNU6-602P-201ENST00000411155 105 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 AC016907.1-201ENST00000419483 435 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 RNU6-848P-201ENST00000515948 107 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 RNU6-617P-201ENST00000516147 107 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 RNU6-473P-201ENST00000516164 107 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 RNU6-1049P-201ENST00000516414 107 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 Y_RNA.691-201ENST00000516611 103 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 AC069113.3-201ENST00000521019 150 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 RNY1P9-201ENST00000532431 109 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 SNORD115-40-201ENST00000606510 82 ntBASIC0.06□□□□□ -2.4
SHANK3Q9BYB0 SNORD49B-201ENST00000365172 72 ntBASIC0.05□□□□□ -2.4
SHANK3Q9BYB0 RNA5SP117-201ENST00000365294 118 ntBASIC0.05□□□□□ -2.4
SHANK3Q9BYB0 RNU2-59P-201ENST00000410482 191 ntBASIC0.05□□□□□ -2.4
SHANK3Q9BYB0 RNU7-141P-201ENST00000459304 62 ntBASIC0.05□□□□□ -2.4
SHANK3Q9BYB0 AC022306.2-201ENST00000617563 647 ntBASIC0.05□□□□□ -2.4
SHANK3Q9BYB0 SNORD45.3-201ENST00000363836 72 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 Y_RNA.383-201ENST00000383855 97 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 RNU6-310P-201ENST00000384655 107 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 AL603910.2-201ENST00000407268 136 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 FGF7P6-202ENST00000451282 293 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 RNU7-62P-201ENST00000458856 62 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 RNU7-102P-201ENST00000458948 62 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 NDUFA4P2-201ENST00000489989 244 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 AC069439.1-201ENST00000494739 167 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 SEPT14P8-201ENST00000508026 178 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 SNORA40.14-201ENST00000516543 86 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 RNU7-149P-201ENST00000516739 59 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 MIR4676-201ENST00000583078 72 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 AC078938.1-201ENST00000620993 318 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 U6.92-201ENST00000636464 89 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 MIR198-201ENST00000637333 62 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 SNORD63-201ENST00000384262 68 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 MIR518F-201ENST00000384973 87 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 MT-TL1-201ENST00000386347 75 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 RNU6-370P-201ENST00000411008 104 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 SNORD83.1-201ENST00000411362 77 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 AC236972.2-201ENST00000434979 310 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 RPL30P15-201ENST00000457129 321 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 RNU7-185P-201ENST00000459215 60 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 RNU6-120P-201ENST00000516077 103 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 RNU6-699P-201ENST00000517081 110 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 AC100767.1-201ENST00000528178 123 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 AL121655.1-201ENST00000605811 308 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 SNORD113-5-201ENST00000607261 78 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 AC011476.5-201ENST00000615594 130 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 AC134878.1-201ENST00000619901 243 ntBASIC0.04□□□□□ -2.4
SHANK3Q9BYB0 SNORD81.1-201ENST00000363064 77 ntBASIC0.03□□□□□ -2.4
SHANK3Q9BYB0 RNA5SP214-201ENST00000363378 118 ntBASIC0.03□□□□□ -2.4
SHANK3Q9BYB0 SNORD115-28-201ENST00000363931 81 ntBASIC0.03□□□□□ -2.4
SHANK3Q9BYB0 Y_RNA.222-201ENST00000364264 102 ntBASIC0.03□□□□□ -2.4
SHANK3Q9BYB0 Y_RNA.279-201ENST00000364763 95 ntBASIC0.03□□□□□ -2.4
SHANK3Q9BYB0 RNY1P8-201ENST00000383970 114 ntBASIC0.03□□□□□ -2.4
SHANK3Q9BYB0 MT-TF-201ENST00000387314 71 ntBASIC0.03□□□□□ -2.4
SHANK3Q9BYB0 PDCL2P1-201ENST00000419302 352 ntBASIC0.03□□□□□ -2.4
SHANK3Q9BYB0 RNU6-966P-201ENST00000516479 104 ntBASIC0.03□□□□□ -2.4
SHANK3Q9BYB0 RNU7-156P-201ENST00000517214 74 ntBASIC0.03□□□□□ -2.4
SHANK3Q9BYB0 AC124312.5-201ENST00000604451 268 ntBASIC0.03□□□□□ -2.4
SHANK3Q9BYB0 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.03□□□□□ -2.4
SHANK3Q9BYB0 AC138305.3-201ENST00000624988 240 ntBASIC0.03□□□□□ -2.4
SHANK3Q9BYB0 RNU6-899P-201ENST00000363947 107 ntBASIC0.02□□□□□ -2.41
SHANK3Q9BYB0 Y_RNA.387-201ENST00000383918 102 ntBASIC0.02□□□□□ -2.41
SHANK3Q9BYB0 AC073261.1-201ENST00000429409 121 ntBASIC0.02□□□□□ -2.41
SHANK3Q9BYB0 POLR2KP2-201ENST00000438155 177 ntBASIC0.02□□□□□ -2.41
SHANK3Q9BYB0 RNU6-693P-201ENST00000516134 107 ntBASIC0.02□□□□□ -2.41
SHANK3Q9BYB0 SCARNA16.5-201ENST00000517114 183 ntBASIC0.02□□□□□ -2.41
SHANK3Q9BYB0 AP000942.4-201ENST00000604811 241 ntBASIC0.02□□□□□ -2.41
SHANK3Q9BYB0 Z97988.1-201ENST00000637697 135 ntBASIC0.02□□□□□ -2.41
SHANK3Q9BYB0 SNORD114-9-201ENST00000364370 72 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 SNORA72.4-201ENST00000384174 132 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 RNU6-1184P-201ENST00000384588 108 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 RNU6-21P-201ENST00000384710 107 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 SNORD72-201ENST00000390994 80 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 Y_RNA.587-201ENST00000391210 103 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 RNA5SP496-201ENST00000391240 109 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 RNU6-559P-201ENST00000516151 98 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 RNU7-110P-201ENST00000516891 62 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 RNU6-1213P-201ENST00000517075 94 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 Y_RNA.718-201ENST00000517110 102 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 AC112693.2-201ENST00000556538 232 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 MIR5688-201ENST00000580619 83 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 AC020891.4-201ENST00000605745 93 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 MIR371B-201ENST00000638082 66 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 Y_RNA.187-201ENST00000363918 113 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 RNA5SP517-201ENST00000364724 117 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 SNORA27-201ENST00000384323 126 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 Y_RNA.494-201ENST00000384432 111 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 AC090844.1-201ENST00000422019 156 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 MTCO1P5-201ENST00000433573 344 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 Y_RNA.660-201ENST00000516002 120 ntBASIC0.01□□□□□ -2.41
SHANK3Q9BYB0 RNA5SP268-201ENST00000516828 124 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 309.4 ms