Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 RNU6-424P-201ENST00000384367 105 ntBASIC1.54□□□□□ -2.16
PKP4Q99569 RNU6-1117P-201ENST00000384525 104 ntBASIC1.54□□□□□ -2.16
PKP4Q99569 MIR624-201ENST00000385217 97 ntBASIC1.54□□□□□ -2.16
PKP4Q99569 RNA5SP127-201ENST00000411051 133 ntBASIC1.54□□□□□ -2.16
PKP4Q99569 SNRPGP14-201ENST00000435400 219 ntBASIC1.54□□□□□ -2.16
PKP4Q99569 snoU13.27-201ENST00000459278 104 ntBASIC1.54□□□□□ -2.16
PKP4Q99569 SNORD13-201ENST00000459299 104 ntBASIC1.54□□□□□ -2.16
PKP4Q99569 AC114811.1-201ENST00000507207 168 ntBASIC1.54□□□□□ -2.16
PKP4Q99569 RNU6-1270P-201ENST00000517128 108 ntBASIC1.54□□□□□ -2.16
PKP4Q99569 AP001328.1-201ENST00000528550 176 ntBASIC1.54□□□□□ -2.16
PKP4Q99569 MIR4709-201ENST00000577272 72 ntBASIC1.54□□□□□ -2.16
PKP4Q99569 AC131055.1-201ENST00000584626 316 ntBASIC1.54□□□□□ -2.16
PKP4Q99569 TUG1_4.1-201ENST00000619464 181 ntBASIC1.54□□□□□ -2.16
PKP4Q99569 RNU1-17P-201ENST00000363022 152 ntBASIC1.53□□□□□ -2.16
PKP4Q99569 MIR539-201ENST00000365690 78 ntBASIC1.53□□□□□ -2.16
PKP4Q99569 MIR548A2-201ENST00000384956 97 ntBASIC1.53□□□□□ -2.16
PKP4Q99569 MIR548I2-201ENST00000408348 149 ntBASIC1.53□□□□□ -2.16
PKP4Q99569 MIR548O-201ENST00000408583 114 ntBASIC1.53□□□□□ -2.16
PKP4Q99569 AL161935.2-201ENST00000414627 60 ntBASIC1.53□□□□□ -2.16
PKP4Q99569 CALM2P4-201ENST00000430810 426 ntBASIC1.53□□□□□ -2.16
PKP4Q99569 ICE2P2-201ENST00000483823 2787 ntBASIC1.53□□□□□ -2.16
PKP4Q99569 RNU6-902P-201ENST00000517212 91 ntBASIC1.53□□□□□ -2.16
PKP4Q99569 RNU6-1116P-201ENST00000517269 99 ntBASIC1.53□□□□□ -2.16
PKP4Q99569 MIR3129-201ENST00000581095 76 ntBASIC1.53□□□□□ -2.16
PKP4Q99569 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.53□□□□□ -2.16
PKP4Q99569 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
PKP4Q99569 Y_RNA.120-201ENST00000363304 110 ntBASIC1.52□□□□□ -2.17
PKP4Q99569 RNU6-833P-201ENST00000363486 107 ntBASIC1.52□□□□□ -2.17
PKP4Q99569 RNU6-915P-201ENST00000364943 103 ntBASIC1.52□□□□□ -2.17
PKP4Q99569 MIR518F-201ENST00000384973 87 ntBASIC1.52□□□□□ -2.17
PKP4Q99569 U8.16-201ENST00000391279 133 ntBASIC1.52□□□□□ -2.17
PKP4Q99569 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.52□□□□□ -2.17
PKP4Q99569 RNU7-34P-201ENST00000459394 64 ntBASIC1.52□□□□□ -2.17
PKP4Q99569 RNA5SP168-201ENST00000516642 112 ntBASIC1.52□□□□□ -2.17
PKP4Q99569 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
PKP4Q99569 SNORD38C-201ENST00000384381 69 ntBASIC1.51□□□□□ -2.17
PKP4Q99569 SNORA67.5-201ENST00000391036 107 ntBASIC1.51□□□□□ -2.17
PKP4Q99569 MIR891A-201ENST00000401237 79 ntBASIC1.51□□□□□ -2.17
PKP4Q99569 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.51□□□□□ -2.17
PKP4Q99569 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.51□□□□□ -2.17
PKP4Q99569 RNU6-62P-201ENST00000516526 102 ntBASIC1.51□□□□□ -2.17
PKP4Q99569 RNU7-25P-201ENST00000516544 62 ntBASIC1.51□□□□□ -2.17
PKP4Q99569 AP000942.3-201ENST00000603702 160 ntBASIC1.51□□□□□ -2.17
PKP4Q99569 U7.2-201ENST00000607576 63 ntBASIC1.51□□□□□ -2.17
PKP4Q99569 AC011603.4-201ENST00000611325 277 ntBASIC1.51□□□□□ -2.17
PKP4Q99569 AC021506.2-201ENST00000612354 169 ntBASIC1.51□□□□□ -2.17
PKP4Q99569 AC134878.1-201ENST00000619901 243 ntBASIC1.51□□□□□ -2.17
PKP4Q99569 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
PKP4Q99569 Y_RNA.52-201ENST00000362760 96 ntBASIC1.5□□□□□ -2.17
PKP4Q99569 Y_RNA.140-201ENST00000363474 103 ntBASIC1.5□□□□□ -2.17
PKP4Q99569 SNORD1A-201ENST00000364968 72 ntBASIC1.5□□□□□ -2.17
PKP4Q99569 SNORD18B-201ENST00000365659 72 ntBASIC1.5□□□□□ -2.17
PKP4Q99569 Y_RNA.410-201ENST00000383992 113 ntBASIC1.5□□□□□ -2.17
PKP4Q99569 RNU6-1081P-201ENST00000384537 107 ntBASIC1.5□□□□□ -2.17
PKP4Q99569 Y_RNA.547-201ENST00000384654 119 ntBASIC1.5□□□□□ -2.17
PKP4Q99569 SNORD77.3-201ENST00000391113 65 ntBASIC1.5□□□□□ -2.17
PKP4Q99569 MIR1323-201ENST00000408090 73 ntBASIC1.5□□□□□ -2.17
PKP4Q99569 AF228730.3-201ENST00000436691 102 ntBASIC1.5□□□□□ -2.17
PKP4Q99569 AC027119.1-201ENST00000440877 241 ntBASIC1.5□□□□□ -2.17
PKP4Q99569 RNU6-1211P-201ENST00000459179 105 ntBASIC1.5□□□□□ -2.17
PKP4Q99569 RNU7-12P-201ENST00000516030 62 ntBASIC1.5□□□□□ -2.17
PKP4Q99569 RNU6-971P-201ENST00000516920 106 ntBASIC1.5□□□□□ -2.17
PKP4Q99569 AL161722.3-201ENST00000605789 2983 ntBASIC1.5□□□□□ -2.17
PKP4Q99569 BX248123.2-201ENST00000606318 124 ntBASIC1.5□□□□□ -2.17
PKP4Q99569 AL513423.1-201ENST00000621695 132 ntBASIC1.5□□□□□ -2.17
PKP4Q99569 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
PKP4Q99569 U8.1-201ENST00000362843 134 ntBASIC1.49□□□□□ -2.17
PKP4Q99569 SNORD115-28-201ENST00000363931 81 ntBASIC1.49□□□□□ -2.17
PKP4Q99569 Y_RNA.291-201ENST00000364886 113 ntBASIC1.49□□□□□ -2.17
PKP4Q99569 RNU6-22P-201ENST00000384355 107 ntBASIC1.49□□□□□ -2.17
PKP4Q99569 AL603914.1-201ENST00000401964 204 ntBASIC1.49□□□□□ -2.17
PKP4Q99569 AL603825.1-201ENST00000438481 80 ntBASIC1.49□□□□□ -2.17
PKP4Q99569 AC099513.1-201ENST00000490423 301 ntBASIC1.49□□□□□ -2.17
PKP4Q99569 AC079140.2-201ENST00000506193 142 ntBASIC1.49□□□□□ -2.17
PKP4Q99569 RNU6-830P-201ENST00000516353 107 ntBASIC1.49□□□□□ -2.17
PKP4Q99569 Y_RNA.692-201ENST00000516627 105 ntBASIC1.49□□□□□ -2.17
PKP4Q99569 AC015688.6-201ENST00000577737 104 ntBASIC1.49□□□□□ -2.17
PKP4Q99569 Y_RNA.757-201ENST00000578934 114 ntBASIC1.49□□□□□ -2.17
PKP4Q99569 MIR548AI-201ENST00000579940 88 ntBASIC1.49□□□□□ -2.17
PKP4Q99569 AC015726.2-201ENST00000620112 122 ntBASIC1.49□□□□□ -2.17
PKP4Q99569 AL121890.5-201ENST00000620848 304 ntBASIC1.49□□□□□ -2.17
PKP4Q99569 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.49□□□□□ -2.17
PKP4Q99569 MIR8063-201ENST00000621930 81 ntBASIC1.49□□□□□ -2.17
PKP4Q99569 Y_RNA.37-201ENST00000362606 108 ntBASIC1.48□□□□□ -2.17
PKP4Q99569 MIR194-1-201ENST00000384892 85 ntBASIC1.48□□□□□ -2.17
PKP4Q99569 MIR660-201ENST00000385235 97 ntBASIC1.48□□□□□ -2.17
PKP4Q99569 MIR1304-201ENST00000408243 91 ntBASIC1.48□□□□□ -2.17
PKP4Q99569 AC015922.2-201ENST00000435593 184 ntBASIC1.48□□□□□ -2.17
PKP4Q99569 PGBD4P5-201ENST00000445958 426 ntBASIC1.48□□□□□ -2.17
PKP4Q99569 RPS29P23-201ENST00000458635 123 ntBASIC1.48□□□□□ -2.17
PKP4Q99569 RNU6-479P-201ENST00000516348 105 ntBASIC1.48□□□□□ -2.17
PKP4Q99569 Y_RNA.686-201ENST00000516548 134 ntBASIC1.48□□□□□ -2.17
PKP4Q99569 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.48□□□□□ -2.17
PKP4Q99569 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.48□□□□□ -2.17
PKP4Q99569 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
PKP4Q99569 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.47□□□□□ -2.17
PKP4Q99569 RNU6-1189P-201ENST00000383958 107 ntBASIC1.47□□□□□ -2.17
PKP4Q99569 MIR452-201ENST00000385020 85 ntBASIC1.47□□□□□ -2.17
PKP4Q99569 MIR517C-201ENST00000385103 95 ntBASIC1.47□□□□□ -2.17
PKP4Q99569 RNU2-51P-201ENST00000410708 197 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 199.6 ms