Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 MIR2115-201ENST00000516657 100 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 RNU6-453P-201ENST00000516819 85 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 MIR4421-201ENST00000578133 69 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 MIR548AO-201ENST00000579992 96 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 AL020996.3-201ENST00000606617 222 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 AL157834.3-201ENST00000615543 103 ntBASIC1□□□□□ -2.25
CMTM3Q96MX0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
CMTM3Q96MX0 RNU6-653P-201ENST00000363074 106 ntBASIC0.99□□□□□ -2.25
CMTM3Q96MX0 RNA5SP99-201ENST00000364020 114 ntBASIC0.99□□□□□ -2.25
CMTM3Q96MX0 Y_RNA.262-201ENST00000364641 102 ntBASIC0.99□□□□□ -2.25
CMTM3Q96MX0 Y_RNA.432-201ENST00000384087 111 ntBASIC0.99□□□□□ -2.25
CMTM3Q96MX0 Y_RNA.494-201ENST00000384432 111 ntBASIC0.99□□□□□ -2.25
CMTM3Q96MX0 MIR548A2-201ENST00000384956 97 ntBASIC0.99□□□□□ -2.25
CMTM3Q96MX0 SNORA40.5-201ENST00000391061 128 ntBASIC0.99□□□□□ -2.25
CMTM3Q96MX0 AL606845.1-201ENST00000404881 255 ntBASIC0.99□□□□□ -2.25
CMTM3Q96MX0 MIR1302-3-201ENST00000408128 138 ntBASIC0.99□□□□□ -2.25
CMTM3Q96MX0 SNORD111-201ENST00000408139 94 ntBASIC0.99□□□□□ -2.25
CMTM3Q96MX0 RNU6-613P-201ENST00000410412 108 ntBASIC0.99□□□□□ -2.25
CMTM3Q96MX0 RNU2-70P-201ENST00000410718 179 ntBASIC0.99□□□□□ -2.25
CMTM3Q96MX0 snoU13.16-201ENST00000459350 104 ntBASIC0.99□□□□□ -2.25
CMTM3Q96MX0 PDCD5P2-201ENST00000507570 312 ntBASIC0.99□□□□□ -2.25
CMTM3Q96MX0 AC036111.3-201ENST00000526389 112 ntBASIC0.99□□□□□ -2.25
CMTM3Q96MX0 AL442067.1-201ENST00000613261 223 ntBASIC0.99□□□□□ -2.25
CMTM3Q96MX0 AC106800.4-201ENST00000614905 153 ntBASIC0.99□□□□□ -2.25
CMTM3Q96MX0 AC134878.1-201ENST00000619901 243 ntBASIC0.99□□□□□ -2.25
CMTM3Q96MX0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
CMTM3Q96MX0 Y_RNA.66-201ENST00000362862 102 ntBASIC0.98□□□□□ -2.25
CMTM3Q96MX0 Y_RNA.76-201ENST00000362931 109 ntBASIC0.98□□□□□ -2.25
CMTM3Q96MX0 SNORD113.3-201ENST00000364630 78 ntBASIC0.98□□□□□ -2.25
CMTM3Q96MX0 Y_RNA.634-201ENST00000364811 113 ntBASIC0.98□□□□□ -2.25
CMTM3Q96MX0 Y_RNA.562-201ENST00000384695 113 ntBASIC0.98□□□□□ -2.25
CMTM3Q96MX0 MIR568-201ENST00000385036 95 ntBASIC0.98□□□□□ -2.25
CMTM3Q96MX0 RNU6-381P-201ENST00000391259 108 ntBASIC0.98□□□□□ -2.25
CMTM3Q96MX0 POLR2J4-204ENST00000418424 324 ntBASIC0.98□□□□□ -2.25
CMTM3Q96MX0 AC108667.1-201ENST00000428618 249 ntBASIC0.98□□□□□ -2.25
CMTM3Q96MX0 RNU7-67P-201ENST00000459003 62 ntBASIC0.98□□□□□ -2.25
CMTM3Q96MX0 RNU6-1132P-201ENST00000459214 107 ntBASIC0.98□□□□□ -2.25
CMTM3Q96MX0 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
CMTM3Q96MX0 RNA5SP458-201ENST00000516188 119 ntBASIC0.98□□□□□ -2.25
CMTM3Q96MX0 RNU6-1270P-201ENST00000517128 108 ntBASIC0.98□□□□□ -2.25
CMTM3Q96MX0 AP003484.1-201ENST00000530974 250 ntBASIC0.98□□□□□ -2.25
CMTM3Q96MX0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.98□□□□□ -2.25
CMTM3Q96MX0 RNU6-654P-201ENST00000364373 107 ntBASIC0.97□□□□□ -2.25
CMTM3Q96MX0 Y_RNA.292-201ENST00000364904 97 ntBASIC0.97□□□□□ -2.25
CMTM3Q96MX0 RNU4-62P-201ENST00000410125 130 ntBASIC0.97□□□□□ -2.25
CMTM3Q96MX0 Y_RNA.622-201ENST00000411091 108 ntBASIC0.97□□□□□ -2.25
CMTM3Q96MX0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.97□□□□□ -2.25
CMTM3Q96MX0 BTF3P4-201ENST00000418852 495 ntBASIC0.97□□□□□ -2.25
CMTM3Q96MX0 AP000942.4-201ENST00000604811 241 ntBASIC0.97□□□□□ -2.25
CMTM3Q96MX0 AC011921.3-201ENST00000605540 361 ntBASIC0.97□□□□□ -2.25
CMTM3Q96MX0 MIR6078-201ENST00000611069 100 ntBASIC0.97□□□□□ -2.25
CMTM3Q96MX0 AL353770.2-201ENST00000620024 78 ntBASIC0.97□□□□□ -2.25
CMTM3Q96MX0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.96□□□□□ -2.26
CMTM3Q96MX0 Y_RNA.91-201ENST00000363042 107 ntBASIC0.96□□□□□ -2.26
CMTM3Q96MX0 Y_RNA.199-201ENST00000364014 102 ntBASIC0.96□□□□□ -2.26
CMTM3Q96MX0 RNU1-36P-201ENST00000365130 165 ntBASIC0.96□□□□□ -2.26
CMTM3Q96MX0 RNU4-17P-201ENST00000365598 141 ntBASIC0.96□□□□□ -2.26
CMTM3Q96MX0 RNU7-95P-201ENST00000459222 64 ntBASIC0.96□□□□□ -2.26
CMTM3Q96MX0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.96□□□□□ -2.26
CMTM3Q96MX0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.96□□□□□ -2.26
CMTM3Q96MX0 Y_RNA.668-201ENST00000516233 93 ntBASIC0.96□□□□□ -2.26
CMTM3Q96MX0 RNA5SP255-201ENST00000516370 107 ntBASIC0.96□□□□□ -2.26
CMTM3Q96MX0 SNORA18.4-201ENST00000516440 124 ntBASIC0.96□□□□□ -2.26
CMTM3Q96MX0 AC097639.2-201ENST00000603159 172 ntBASIC0.96□□□□□ -2.26
CMTM3Q96MX0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.95□□□□□ -2.26
CMTM3Q96MX0 RNU6-103P-201ENST00000363686 107 ntBASIC0.95□□□□□ -2.26
CMTM3Q96MX0 SNORD45.3-201ENST00000363836 72 ntBASIC0.95□□□□□ -2.26
CMTM3Q96MX0 SNORA27-201ENST00000384323 126 ntBASIC0.95□□□□□ -2.26
CMTM3Q96MX0 MT-TN-201ENST00000387400 73 ntBASIC0.95□□□□□ -2.26
CMTM3Q96MX0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.95□□□□□ -2.26
CMTM3Q96MX0 RNU6-958P-201ENST00000516995 106 ntBASIC0.95□□□□□ -2.26
CMTM3Q96MX0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.95□□□□□ -2.26
CMTM3Q96MX0 Y_RNA.410-201ENST00000383992 113 ntBASIC0.94□□□□□ -2.26
CMTM3Q96MX0 SNORA2B-201ENST00000384583 137 ntBASIC0.94□□□□□ -2.26
CMTM3Q96MX0 AF228730.3-201ENST00000436691 102 ntBASIC0.94□□□□□ -2.26
CMTM3Q96MX0 RNU7-73P-201ENST00000458743 63 ntBASIC0.94□□□□□ -2.26
CMTM3Q96MX0 U7.7-201ENST00000459276 60 ntBASIC0.94□□□□□ -2.26
CMTM3Q96MX0 AC005840.1-201ENST00000498412 377 ntBASIC0.94□□□□□ -2.26
CMTM3Q96MX0 SNORD36C-201ENST00000516733 66 ntBASIC0.94□□□□□ -2.26
CMTM3Q96MX0 MIR4769-201ENST00000584126 77 ntBASIC0.94□□□□□ -2.26
CMTM3Q96MX0 Y_RNA.168-201ENST00000363740 102 ntBASIC0.93□□□□□ -2.26
CMTM3Q96MX0 RNA5SP95-201ENST00000410319 137 ntBASIC0.93□□□□□ -2.26
CMTM3Q96MX0 RPS3AP1-201ENST00000413190 320 ntBASIC0.93□□□□□ -2.26
CMTM3Q96MX0 RPS29P24-201ENST00000486345 171 ntBASIC0.93□□□□□ -2.26
CMTM3Q96MX0 RNU6-197P-201ENST00000516680 100 ntBASIC0.93□□□□□ -2.26
CMTM3Q96MX0 RNU6-94P-201ENST00000607728 107 ntBASIC0.93□□□□□ -2.26
CMTM3Q96MX0 MIR377-201ENST00000362145 69 ntBASIC0.92□□□□□ -2.26
CMTM3Q96MX0 RNY4P28-201ENST00000365281 93 ntBASIC0.92□□□□□ -2.26
CMTM3Q96MX0 RNU6-728P-201ENST00000365375 104 ntBASIC0.92□□□□□ -2.26
CMTM3Q96MX0 SNORA17.3-201ENST00000391159 129 ntBASIC0.92□□□□□ -2.26
CMTM3Q96MX0 SNORD58.1-201ENST00000391313 66 ntBASIC0.92□□□□□ -2.26
CMTM3Q96MX0 AP1B1P2-201ENST00000416196 106 ntBASIC0.92□□□□□ -2.26
CMTM3Q96MX0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.92□□□□□ -2.26
CMTM3Q96MX0 AC067940.1-201ENST00000458411 300 ntBASIC0.92□□□□□ -2.26
CMTM3Q96MX0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.92□□□□□ -2.26
CMTM3Q96MX0 RNU7-53P-201ENST00000516705 60 ntBASIC0.92□□□□□ -2.26
CMTM3Q96MX0 AP000753.3-201ENST00000604083 169 ntBASIC0.92□□□□□ -2.26
CMTM3Q96MX0 Y_RNA.20-201ENST00000362479 113 ntBASIC0.91□□□□□ -2.26
CMTM3Q96MX0 SNORD27-201ENST00000363981 72 ntBASIC0.91□□□□□ -2.26
CMTM3Q96MX0 RNU6-580P-201ENST00000365159 107 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms