Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PDLIM2Q96JY6 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.93□□□□□ -2.1
PDLIM2Q96JY6 SNORA63D-201ENST00000364359 132 ntBASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 Y_RNA.366-201ENST00000365540 102 ntBASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 Y_RNA.528-201ENST00000384575 108 ntBASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 RNU6-950P-201ENST00000384651 107 ntBASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 U8.16-201ENST00000391279 133 ntBASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 RNU2-7P-201ENST00000410794 178 ntBASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 RNU6-938P-201ENST00000411285 103 ntBASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 RNU6-240P-201ENST00000516098 97 ntBASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 SNORA18.7-201ENST00000516910 131 ntBASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 AC027279.3-201ENST00000625055 122 ntBASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 Y_RNA.35-201ENST00000362601 101 ntBASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 MIR520A-201ENST00000384862 85 ntBASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 MIR676-201ENST00000390702 67 ntBASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 SNORA48.1-201ENST00000390879 135 ntBASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 MIR1261-201ENST00000408659 82 ntBASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 RNA5SP270-201ENST00000411361 118 ntBASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 AC087499.4-201ENST00000448505 178 ntBASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 RNA5SP168-201ENST00000516642 112 ntBASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 AP003484.1-201ENST00000530974 250 ntBASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 SNORD14A-201ENST00000606526 91 ntBASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 Y_RNA.351-201ENST00000365436 96 ntBASIC1.9□□□□□ -2.11
PDLIM2Q96JY6 Y_RNA.440-201ENST00000384120 114 ntBASIC1.9□□□□□ -2.11
PDLIM2Q96JY6 RNU6-424P-201ENST00000384367 105 ntBASIC1.9□□□□□ -2.11
PDLIM2Q96JY6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
PDLIM2Q96JY6 RNA5SP501-201ENST00000410990 112 ntBASIC1.9□□□□□ -2.11
PDLIM2Q96JY6 RPS26P48-201ENST00000491713 339 ntBASIC1.9□□□□□ -2.11
PDLIM2Q96JY6 RNU7-12P-201ENST00000516030 62 ntBASIC1.9□□□□□ -2.11
PDLIM2Q96JY6 SUB1P4-201ENST00000566062 339 ntBASIC1.9□□□□□ -2.11
PDLIM2Q96JY6 AL627230.6-201ENST00000611129 280 ntBASIC1.9□□□□□ -2.11
PDLIM2Q96JY6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.9□□□□□ -2.11
PDLIM2Q96JY6 RNU1-133P-201ENST00000364867 167 ntBASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 RNU6-690P-201ENST00000365242 106 ntBASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 RNU6-1031P-201ENST00000384773 107 ntBASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 MIR9-3-201ENST00000385084 90 ntBASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 RNA5SP136-201ENST00000410906 107 ntBASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 AC063976.4-201ENST00000421971 163 ntBASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 AC015922.2-201ENST00000435593 184 ntBASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 RPL23AP63-201ENST00000498752 471 ntBASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 SNORD114-1-201ENST00000362705 72 ntBASIC1.88□□□□□ -2.11
PDLIM2Q96JY6 RNU6-833P-201ENST00000363486 107 ntBASIC1.88□□□□□ -2.11
PDLIM2Q96JY6 RNU6-880P-201ENST00000384526 107 ntBASIC1.88□□□□□ -2.11
PDLIM2Q96JY6 RNU7-34P-201ENST00000459394 64 ntBASIC1.88□□□□□ -2.11
PDLIM2Q96JY6 RNU7-80P-201ENST00000459562 61 ntBASIC1.88□□□□□ -2.11
PDLIM2Q96JY6 RNA5SP437-201ENST00000517249 129 ntBASIC1.88□□□□□ -2.11
PDLIM2Q96JY6 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
PDLIM2Q96JY6 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.88□□□□□ -2.11
PDLIM2Q96JY6 AL596211.1-201ENST00000569873 2277 ntBASIC1.88□□□□□ -2.11
PDLIM2Q96JY6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
PDLIM2Q96JY6 MIR342-201ENST00000362212 99 ntBASIC1.87□□□□□ -2.11
PDLIM2Q96JY6 RNU6-112P-201ENST00000363599 104 ntBASIC1.87□□□□□ -2.11
PDLIM2Q96JY6 RNU6-755P-201ENST00000364400 103 ntBASIC1.87□□□□□ -2.11
PDLIM2Q96JY6 Y_RNA.241-201ENST00000364470 117 ntBASIC1.87□□□□□ -2.11
PDLIM2Q96JY6 MIR320A-201ENST00000385302 82 ntBASIC1.87□□□□□ -2.11
PDLIM2Q96JY6 AL627390.1-201ENST00000396055 340 ntBASIC1.87□□□□□ -2.11
PDLIM2Q96JY6 SNX2P2-201ENST00000424553 323 ntBASIC1.87□□□□□ -2.11
PDLIM2Q96JY6 RNU6-349P-201ENST00000362402 107 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 SNORA3A-201ENST00000364113 130 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 RNY1P6-201ENST00000384193 109 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 Y_RNA.454-201ENST00000384224 113 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 RNU6-296P-201ENST00000384608 107 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 U8.17-201ENST00000391292 132 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 AC003989.2-201ENST00000440224 169 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 AC093850.1-201ENST00000454121 251 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 RNU6-830P-201ENST00000516353 107 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 MIR4709-201ENST00000577272 72 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 AC021443.1-201ENST00000604478 211 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 U1.36-201ENST00000620684 176 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 SNORA27-201ENST00000384323 126 ntBASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 MIR570-201ENST00000384917 97 ntBASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 MIR516B2-201ENST00000385190 85 ntBASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 COX6CP6-201ENST00000490840 228 ntBASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 RNA5SP481-201ENST00000516814 122 ntBASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 RNU7-181P-201ENST00000517234 74 ntBASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 AC007012.1-201ENST00000567192 175 ntBASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 MIR4778-201ENST00000577635 80 ntBASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 AC091932.4-201ENST00000623386 200 ntBASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 AC008555.8-201ENST00000623602 2168 ntBASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
PDLIM2Q96JY6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
PDLIM2Q96JY6 MIR452-201ENST00000385020 85 ntBASIC1.84□□□□□ -2.11
PDLIM2Q96JY6 MIR1267-201ENST00000408723 78 ntBASIC1.84□□□□□ -2.11
PDLIM2Q96JY6 snoU13.27-201ENST00000459278 104 ntBASIC1.84□□□□□ -2.11
PDLIM2Q96JY6 snoU13.15-201ENST00000459407 104 ntBASIC1.84□□□□□ -2.11
PDLIM2Q96JY6 snoU13.26-201ENST00000459452 105 ntBASIC1.84□□□□□ -2.11
PDLIM2Q96JY6 UBL5P3-201ENST00000475112 231 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 235 ms