Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RNA5SP272-201ENST00000516095 111 ntBASIC1.64□□□□□ -2.15
VPS50Q96JG6 RNU6-922P-201ENST00000516753 99 ntBASIC1.64□□□□□ -2.15
VPS50Q96JG6 AC019176.1-201ENST00000518519 225 ntBASIC1.64□□□□□ -2.15
VPS50Q96JG6 MIR4422-201ENST00000581938 83 ntBASIC1.64□□□□□ -2.15
VPS50Q96JG6 MIR3133-201ENST00000583157 78 ntBASIC1.64□□□□□ -2.15
VPS50Q96JG6 AL365205.2-201ENST00000594586 68 ntBASIC1.64□□□□□ -2.15
VPS50Q96JG6 SNORA25.7-201ENST00000364375 127 ntBASIC1.63□□□□□ -2.15
VPS50Q96JG6 SNORA2.2-201ENST00000365473 135 ntBASIC1.63□□□□□ -2.15
VPS50Q96JG6 SNORD28B-201ENST00000390993 75 ntBASIC1.63□□□□□ -2.15
VPS50Q96JG6 U8.17-201ENST00000391292 132 ntBASIC1.63□□□□□ -2.15
VPS50Q96JG6 AL627390.1-201ENST00000396055 340 ntBASIC1.63□□□□□ -2.15
VPS50Q96JG6 SNORD123-201ENST00000459473 70 ntBASIC1.63□□□□□ -2.15
VPS50Q96JG6 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.63□□□□□ -2.15
VPS50Q96JG6 AC090049.2-201ENST00000550377 109 ntBASIC1.63□□□□□ -2.15
VPS50Q96JG6 MIR548AR-201ENST00000582191 57 ntBASIC1.63□□□□□ -2.15
VPS50Q96JG6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.63□□□□□ -2.15
VPS50Q96JG6 AP000942.3-201ENST00000603702 160 ntBASIC1.63□□□□□ -2.15
VPS50Q96JG6 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.63□□□□□ -2.15
VPS50Q96JG6 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
VPS50Q96JG6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.63□□□□□ -2.15
VPS50Q96JG6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
VPS50Q96JG6 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
VPS50Q96JG6 SNORD41-201ENST00000386967 70 ntBASIC1.62□□□□□ -2.15
VPS50Q96JG6 AC134878.1-201ENST00000619901 243 ntBASIC1.62□□□□□ -2.15
VPS50Q96JG6 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
VPS50Q96JG6 Y_RNA.140-201ENST00000363474 103 ntBASIC1.61□□□□□ -2.15
VPS50Q96JG6 Y_RNA.215-201ENST00000364204 112 ntBASIC1.61□□□□□ -2.15
VPS50Q96JG6 Y_RNA.400-201ENST00000383963 111 ntBASIC1.61□□□□□ -2.15
VPS50Q96JG6 RNU6-187P-201ENST00000384139 106 ntBASIC1.61□□□□□ -2.15
VPS50Q96JG6 Y_RNA.542-201ENST00000384641 111 ntBASIC1.61□□□□□ -2.15
VPS50Q96JG6 MIR570-201ENST00000384917 97 ntBASIC1.61□□□□□ -2.15
VPS50Q96JG6 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.61□□□□□ -2.15
VPS50Q96JG6 SNORA75.5-201ENST00000391291 81 ntBASIC1.61□□□□□ -2.15
VPS50Q96JG6 AC112693.2-201ENST00000556538 232 ntBASIC1.61□□□□□ -2.15
VPS50Q96JG6 SNORD53B-201ENST00000577887 78 ntBASIC1.61□□□□□ -2.15
VPS50Q96JG6 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.61□□□□□ -2.15
VPS50Q96JG6 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.61□□□□□ -2.15
VPS50Q96JG6 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.6□□□□□ -2.15
VPS50Q96JG6 RNU1-98P-201ENST00000458992 160 ntBASIC1.6□□□□□ -2.15
VPS50Q96JG6 RPS29P11-201ENST00000496507 171 ntBASIC1.6□□□□□ -2.15
VPS50Q96JG6 SNORA25.12-201ENST00000516202 82 ntBASIC1.6□□□□□ -2.15
VPS50Q96JG6 SNORA18.4-201ENST00000516440 124 ntBASIC1.6□□□□□ -2.15
VPS50Q96JG6 AP003484.1-201ENST00000530974 250 ntBASIC1.6□□□□□ -2.15
VPS50Q96JG6 MIR3646-201ENST00000578301 84 ntBASIC1.6□□□□□ -2.15
VPS50Q96JG6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.6□□□□□ -2.15
VPS50Q96JG6 MTND1P7-201ENST00000632801 297 ntBASIC1.6□□□□□ -2.15
VPS50Q96JG6 RNU6-1292P-201ENST00000383856 107 ntBASIC1.59□□□□□ -2.15
VPS50Q96JG6 RNU6-1189P-201ENST00000383958 107 ntBASIC1.59□□□□□ -2.15
VPS50Q96JG6 Y_RNA.497-201ENST00000384447 98 ntBASIC1.59□□□□□ -2.15
VPS50Q96JG6 MIR624-201ENST00000385217 97 ntBASIC1.59□□□□□ -2.15
VPS50Q96JG6 MIR569-201ENST00000385228 96 ntBASIC1.59□□□□□ -2.15
VPS50Q96JG6 RNA5SP127-201ENST00000411051 133 ntBASIC1.59□□□□□ -2.15
VPS50Q96JG6 RNU7-197P-201ENST00000458836 62 ntBASIC1.59□□□□□ -2.15
VPS50Q96JG6 RPS26P48-201ENST00000491713 339 ntBASIC1.59□□□□□ -2.15
VPS50Q96JG6 AC079140.2-201ENST00000506193 142 ntBASIC1.59□□□□□ -2.15
VPS50Q96JG6 SNORA74.3-201ENST00000517108 154 ntBASIC1.59□□□□□ -2.15
VPS50Q96JG6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.59□□□□□ -2.15
VPS50Q96JG6 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.59□□□□□ -2.15
VPS50Q96JG6 MTND5P32-201ENST00000560711 1802 ntBASIC1.59□□□□□ -2.16
VPS50Q96JG6 Y_RNA.241-201ENST00000364470 117 ntBASIC1.58□□□□□ -2.16
VPS50Q96JG6 Y_RNA.251-201ENST00000364551 99 ntBASIC1.58□□□□□ -2.16
VPS50Q96JG6 SNORA20-201ENST00000384662 132 ntBASIC1.58□□□□□ -2.16
VPS50Q96JG6 RNU6-460P-201ENST00000391158 108 ntBASIC1.58□□□□□ -2.16
VPS50Q96JG6 AL451046.2-201ENST00000403074 277 ntBASIC1.58□□□□□ -2.16
VPS50Q96JG6 AC027119.1-201ENST00000440877 241 ntBASIC1.58□□□□□ -2.16
VPS50Q96JG6 MIR8081-201ENST00000611533 95 ntBASIC1.58□□□□□ -2.16
VPS50Q96JG6 AP000648.3-201ENST00000623539 4507 ntBASIC1.58□□□□□ -2.16
VPS50Q96JG6 Y_RNA.52-201ENST00000362760 96 ntBASIC1.57□□□□□ -2.16
VPS50Q96JG6 RNU6-508P-201ENST00000363231 103 ntBASIC1.57□□□□□ -2.16
VPS50Q96JG6 RNY1P5-201ENST00000383890 115 ntBASIC1.57□□□□□ -2.16
VPS50Q96JG6 Y_RNA.410-201ENST00000383992 113 ntBASIC1.57□□□□□ -2.16
VPS50Q96JG6 RNU6-746P-201ENST00000384112 109 ntBASIC1.57□□□□□ -2.16
VPS50Q96JG6 Y_RNA.440-201ENST00000384120 114 ntBASIC1.57□□□□□ -2.16
VPS50Q96JG6 MIR548M-201ENST00000408260 86 ntBASIC1.57□□□□□ -2.16
VPS50Q96JG6 AC087499.4-201ENST00000448505 178 ntBASIC1.57□□□□□ -2.16
VPS50Q96JG6 SNORD13-201ENST00000459299 104 ntBASIC1.57□□□□□ -2.16
VPS50Q96JG6 AC108729.3-201ENST00000513484 108 ntBASIC1.57□□□□□ -2.16
VPS50Q96JG6 RNU6-322P-201ENST00000516010 103 ntBASIC1.57□□□□□ -2.16
VPS50Q96JG6 RNU6-426P-201ENST00000516464 97 ntBASIC1.57□□□□□ -2.16
VPS50Q96JG6 RNU2-60P-201ENST00000517290 128 ntBASIC1.57□□□□□ -2.16
VPS50Q96JG6 MIR548X2-201ENST00000579776 100 ntBASIC1.57□□□□□ -2.16
VPS50Q96JG6 MIR5197-201ENST00000583721 112 ntBASIC1.57□□□□□ -2.16
VPS50Q96JG6 AL513534.2-201ENST00000603836 250 ntBASIC1.57□□□□□ -2.16
VPS50Q96JG6 MIR378A-201ENST00000362177 66 ntBASIC1.56□□□□□ -2.16
VPS50Q96JG6 Y_RNA.370-201ENST00000365589 108 ntBASIC1.56□□□□□ -2.16
VPS50Q96JG6 Y_RNA.488-201ENST00000384403 102 ntBASIC1.56□□□□□ -2.16
VPS50Q96JG6 RNU1-78P-201ENST00000391248 165 ntBASIC1.56□□□□□ -2.16
VPS50Q96JG6 RPS27P16-201ENST00000425758 201 ntBASIC1.56□□□□□ -2.16
VPS50Q96JG6 AL603825.1-201ENST00000438481 80 ntBASIC1.56□□□□□ -2.16
VPS50Q96JG6 RNU6-1149P-201ENST00000516810 97 ntBASIC1.56□□□□□ -2.16
VPS50Q96JG6 Y_RNA.703-201ENST00000516846 111 ntBASIC1.56□□□□□ -2.16
VPS50Q96JG6 SCARNA15-202ENST00000516881 127 ntBASIC1.56□□□□□ -2.16
VPS50Q96JG6 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.56□□□□□ -2.16
VPS50Q96JG6 AC090821.2-201ENST00000523552 176 ntBASIC1.56□□□□□ -2.16
VPS50Q96JG6 MIR3937-201ENST00000580135 106 ntBASIC1.56□□□□□ -2.16
VPS50Q96JG6 MIR4764-201ENST00000580680 88 ntBASIC1.56□□□□□ -2.16
VPS50Q96JG6 SNORA27-201ENST00000384323 126 ntBASIC1.55□□□□□ -2.16
VPS50Q96JG6 MIR520C-201ENST00000385005 87 ntBASIC1.55□□□□□ -2.16
VPS50Q96JG6 SNORA40.5-201ENST00000391061 128 ntBASIC1.55□□□□□ -2.16
VPS50Q96JG6 MIR513C-201ENST00000401352 84 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms