Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 Y_RNA.264-201ENST00000364665 102 ntBASIC3.62□□□□□ -1.83
EFCAB3Q8N7B9 RNU1-91P-201ENST00000364746 163 ntBASIC3.62□□□□□ -1.83
EFCAB3Q8N7B9 SNORA48.1-201ENST00000390879 135 ntBASIC3.62□□□□□ -1.83
EFCAB3Q8N7B9 RNA5SP465-201ENST00000391195 109 ntBASIC3.62□□□□□ -1.83
EFCAB3Q8N7B9 RNA5SP137-201ENST00000516833 135 ntBASIC3.62□□□□□ -1.83
EFCAB3Q8N7B9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.62□□□□□ -1.83
EFCAB3Q8N7B9 MIR3935-201ENST00000583472 104 ntBASIC3.62□□□□□ -1.83
EFCAB3Q8N7B9 MIR4536-1-201ENST00000583537 88 ntBASIC3.62□□□□□ -1.83
EFCAB3Q8N7B9 AL137849.1-201ENST00000604767 169 ntBASIC3.62□□□□□ -1.83
EFCAB3Q8N7B9 SCARNA4.1-201ENST00000628597 123 ntBASIC3.62□□□□□ -1.83
EFCAB3Q8N7B9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
EFCAB3Q8N7B9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.62□□□□□ -1.83
EFCAB3Q8N7B9 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
EFCAB3Q8N7B9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
EFCAB3Q8N7B9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
EFCAB3Q8N7B9 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
EFCAB3Q8N7B9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
EFCAB3Q8N7B9 SNORA59A-201ENST00000459326 152 ntBASIC3.61□□□□□ -1.83
EFCAB3Q8N7B9 MIR4644-201ENST00000579929 84 ntBASIC3.61□□□□□ -1.83
EFCAB3Q8N7B9 AL357312.1-201ENST00000603879 298 ntBASIC3.61□□□□□ -1.83
EFCAB3Q8N7B9 MIR4251-201ENST00000635819 61 ntBASIC3.61□□□□□ -1.83
EFCAB3Q8N7B9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.61□□□□□ -1.83
EFCAB3Q8N7B9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
EFCAB3Q8N7B9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
EFCAB3Q8N7B9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
EFCAB3Q8N7B9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
EFCAB3Q8N7B9 RNU6-296P-201ENST00000384608 107 ntBASIC3.6□□□□□ -1.83
EFCAB3Q8N7B9 MIR627-201ENST00000384979 97 ntBASIC3.6□□□□□ -1.83
EFCAB3Q8N7B9 MIR218-2-201ENST00000385006 110 ntBASIC3.6□□□□□ -1.83
EFCAB3Q8N7B9 SNORD77.2-201ENST00000391045 68 ntBASIC3.6□□□□□ -1.83
EFCAB3Q8N7B9 AC019129.1-201ENST00000403786 261 ntBASIC3.6□□□□□ -1.83
EFCAB3Q8N7B9 MIR1283-2-201ENST00000408621 87 ntBASIC3.6□□□□□ -1.83
EFCAB3Q8N7B9 RNU2-59P-201ENST00000410482 191 ntBASIC3.6□□□□□ -1.83
EFCAB3Q8N7B9 AL035423.1-201ENST00000420331 213 ntBASIC3.6□□□□□ -1.83
EFCAB3Q8N7B9 AC104389.3-201ENST00000445629 235 ntBASIC3.6□□□□□ -1.83
EFCAB3Q8N7B9 RNU6-687P-201ENST00000516443 89 ntBASIC3.6□□□□□ -1.83
EFCAB3Q8N7B9 RNA5SP164-201ENST00000516533 110 ntBASIC3.6□□□□□ -1.83
EFCAB3Q8N7B9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.6□□□□□ -1.83
EFCAB3Q8N7B9 RNVU1-4-201ENST00000612985 164 ntBASIC3.6□□□□□ -1.83
EFCAB3Q8N7B9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
EFCAB3Q8N7B9 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
EFCAB3Q8N7B9 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
EFCAB3Q8N7B9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
EFCAB3Q8N7B9 RNU6-112P-201ENST00000363599 104 ntBASIC3.59□□□□□ -1.83
EFCAB3Q8N7B9 MIR183-201ENST00000384958 110 ntBASIC3.59□□□□□ -1.83
EFCAB3Q8N7B9 HMGN2P3-201ENST00000433603 273 ntBASIC3.59□□□□□ -1.83
EFCAB3Q8N7B9 HMGN2P5-201ENST00000436882 273 ntBASIC3.59□□□□□ -1.83
EFCAB3Q8N7B9 AC008011.1-201ENST00000545989 227 ntBASIC3.59□□□□□ -1.83
EFCAB3Q8N7B9 AC138749.4-201ENST00000563970 127 ntBASIC3.59□□□□□ -1.83
EFCAB3Q8N7B9 AC087499.8-201ENST00000578406 226 ntBASIC3.59□□□□□ -1.83
EFCAB3Q8N7B9 U6.105-201ENST00000637379 88 ntBASIC3.59□□□□□ -1.83
EFCAB3Q8N7B9 AC108206.1-201ENST00000570186 4159 ntBASIC3.59□□□□□ -1.84
EFCAB3Q8N7B9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
EFCAB3Q8N7B9 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
EFCAB3Q8N7B9 RNU5F-1-201ENST00000362507 117 ntBASIC3.58□□□□□ -1.84
EFCAB3Q8N7B9 RNU6-649P-201ENST00000384463 107 ntBASIC3.58□□□□□ -1.84
EFCAB3Q8N7B9 Y_RNA.532-201ENST00000384590 113 ntBASIC3.58□□□□□ -1.84
EFCAB3Q8N7B9 RNA5SP292-201ENST00000390974 118 ntBASIC3.58□□□□□ -1.84
EFCAB3Q8N7B9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.58□□□□□ -1.84
EFCAB3Q8N7B9 RNU7-26P-201ENST00000458980 63 ntBASIC3.58□□□□□ -1.84
EFCAB3Q8N7B9 RN7SL293P-201ENST00000481765 281 ntBASIC3.58□□□□□ -1.84
EFCAB3Q8N7B9 AC023790.1-201ENST00000482174 347 ntBASIC3.58□□□□□ -1.84
EFCAB3Q8N7B9 SNORA18.5-201ENST00000516616 101 ntBASIC3.58□□□□□ -1.84
EFCAB3Q8N7B9 MIR4298-201ENST00000584380 73 ntBASIC3.58□□□□□ -1.84
EFCAB3Q8N7B9 AC008163.1-202ENST00000636004 2889 ntBASIC3.58□□□□□ -1.84
EFCAB3Q8N7B9 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
EFCAB3Q8N7B9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
EFCAB3Q8N7B9 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.57□□□□□ -1.84
EFCAB3Q8N7B9 RNU1-148P-201ENST00000384472 162 ntBASIC3.57□□□□□ -1.84
EFCAB3Q8N7B9 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
EFCAB3Q8N7B9 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
EFCAB3Q8N7B9 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
EFCAB3Q8N7B9 AC092435.3-201ENST00000565538 3654 ntBASIC3.57□□□□□ -1.84
EFCAB3Q8N7B9 MIR4425-201ENST00000580572 84 ntBASIC3.57□□□□□ -1.84
EFCAB3Q8N7B9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.57□□□□□ -1.84
EFCAB3Q8N7B9 AC006023.1-201ENST00000603944 259 ntBASIC3.57□□□□□ -1.84
EFCAB3Q8N7B9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.57□□□□□ -1.84
EFCAB3Q8N7B9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
EFCAB3Q8N7B9 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
EFCAB3Q8N7B9 MIR635-201ENST00000384830 98 ntBASIC3.56□□□□□ -1.84
EFCAB3Q8N7B9 HMGN2P39-201ENST00000398005 273 ntBASIC3.56□□□□□ -1.84
EFCAB3Q8N7B9 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.56□□□□□ -1.84
EFCAB3Q8N7B9 MIR4484-201ENST00000582855 83 ntBASIC3.56□□□□□ -1.84
EFCAB3Q8N7B9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.56□□□□□ -1.84
EFCAB3Q8N7B9 MIR7975-201ENST00000619350 68 ntBASIC3.56□□□□□ -1.84
EFCAB3Q8N7B9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
EFCAB3Q8N7B9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
EFCAB3Q8N7B9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
EFCAB3Q8N7B9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
EFCAB3Q8N7B9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
EFCAB3Q8N7B9 MIR30E-201ENST00000362104 92 ntBASIC3.55□□□□□ -1.84
EFCAB3Q8N7B9 RNVU1-14-201ENST00000384770 164 ntBASIC3.55□□□□□ -1.84
EFCAB3Q8N7B9 MIR520H-201ENST00000385126 88 ntBASIC3.55□□□□□ -1.84
EFCAB3Q8N7B9 HSPE1P24-201ENST00000450782 238 ntBASIC3.55□□□□□ -1.84
EFCAB3Q8N7B9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.55□□□□□ -1.84
EFCAB3Q8N7B9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
EFCAB3Q8N7B9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
EFCAB3Q8N7B9 Y_RNA.386-201ENST00000383913 105 ntBASIC3.54□□□□□ -1.84
EFCAB3Q8N7B9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
EFCAB3Q8N7B9 RNA5SP424-201ENST00000390988 115 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms