Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 U8.16-201ENST00000391279 133 ntBASIC2.15□□□□□ -2.07
KRT40Q6A162 Y_RNA.630-201ENST00000411370 108 ntBASIC2.15□□□□□ -2.07
KRT40Q6A162 AP1B1P2-201ENST00000416196 106 ntBASIC2.15□□□□□ -2.07
KRT40Q6A162 RNU7-193P-201ENST00000516723 65 ntBASIC2.15□□□□□ -2.07
KRT40Q6A162 RNU6-1149P-201ENST00000516810 97 ntBASIC2.15□□□□□ -2.07
KRT40Q6A162 IGKV1-22-201ENST00000524313 326 ntBASIC2.15□□□□□ -2.07
KRT40Q6A162 AC090049.2-201ENST00000550377 109 ntBASIC2.15□□□□□ -2.07
KRT40Q6A162 Y_RNA.757-201ENST00000578934 114 ntBASIC2.15□□□□□ -2.07
KRT40Q6A162 MIR5197-201ENST00000583721 112 ntBASIC2.15□□□□□ -2.07
KRT40Q6A162 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.15□□□□□ -2.07
KRT40Q6A162 AC108081.1-201ENST00000604358 221 ntBASIC2.15□□□□□ -2.07
KRT40Q6A162 AL022345.2-201ENST00000606307 135 ntBASIC2.15□□□□□ -2.07
KRT40Q6A162 MIR8081-201ENST00000611533 95 ntBASIC2.15□□□□□ -2.07
KRT40Q6A162 AL359851.1-201ENST00000569460 4997 ntBASIC2.15□□□□□ -2.07
KRT40Q6A162 Y_RNA.242-201ENST00000364473 110 ntBASIC2.14□□□□□ -2.07
KRT40Q6A162 Y_RNA.273-201ENST00000364703 102 ntBASIC2.14□□□□□ -2.07
KRT40Q6A162 RNU6-215P-201ENST00000365169 102 ntBASIC2.14□□□□□ -2.07
KRT40Q6A162 RNU6-1031P-201ENST00000384773 107 ntBASIC2.14□□□□□ -2.07
KRT40Q6A162 MIR802-201ENST00000390235 94 ntBASIC2.14□□□□□ -2.07
KRT40Q6A162 Y_RNA.617-201ENST00000410920 90 ntBASIC2.14□□□□□ -2.07
KRT40Q6A162 AC069257.2-201ENST00000441819 155 ntBASIC2.14□□□□□ -2.07
KRT40Q6A162 AC099513.1-201ENST00000490423 301 ntBASIC2.14□□□□□ -2.07
KRT40Q6A162 MIR514B-201ENST00000516774 80 ntBASIC2.14□□□□□ -2.07
KRT40Q6A162 RNA5SP364-201ENST00000516938 78 ntBASIC2.14□□□□□ -2.07
KRT40Q6A162 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.14□□□□□ -2.07
KRT40Q6A162 AL359881.1-201ENST00000602916 267 ntBASIC2.14□□□□□ -2.07
KRT40Q6A162 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
KRT40Q6A162 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KRT40Q6A162 Y_RNA.37-201ENST00000362606 108 ntBASIC2.13□□□□□ -2.07
KRT40Q6A162 RN7SKP200-201ENST00000410564 320 ntBASIC2.13□□□□□ -2.07
KRT40Q6A162 RNA5SP100-201ENST00000410903 110 ntBASIC2.13□□□□□ -2.07
KRT40Q6A162 RNA5SP59-201ENST00000410922 110 ntBASIC2.13□□□□□ -2.07
KRT40Q6A162 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.13□□□□□ -2.07
KRT40Q6A162 CYCTP-201ENST00000504253 315 ntBASIC2.13□□□□□ -2.07
KRT40Q6A162 RNA5SP182-201ENST00000516064 82 ntBASIC2.13□□□□□ -2.07
KRT40Q6A162 RNU6-781P-201ENST00000516377 101 ntBASIC2.13□□□□□ -2.07
KRT40Q6A162 RNA5SP168-201ENST00000516642 112 ntBASIC2.13□□□□□ -2.07
KRT40Q6A162 SNORD36C-201ENST00000516733 66 ntBASIC2.13□□□□□ -2.07
KRT40Q6A162 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.13□□□□□ -2.07
KRT40Q6A162 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.13□□□□□ -2.07
KRT40Q6A162 SNORA28-201ENST00000606769 126 ntBASIC2.13□□□□□ -2.07
KRT40Q6A162 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.13□□□□□ -2.07
KRT40Q6A162 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.13□□□□□ -2.07
KRT40Q6A162 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.13□□□□□ -2.07
KRT40Q6A162 MIR3914-2-201ENST00000637339 95 ntBASIC2.13□□□□□ -2.07
KRT40Q6A162 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRT40Q6A162 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRT40Q6A162 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KRT40Q6A162 SNORD115-28-201ENST00000363931 81 ntBASIC2.12□□□□□ -2.07
KRT40Q6A162 SNORA16.1-201ENST00000364597 132 ntBASIC2.12□□□□□ -2.07
KRT40Q6A162 RNU6-163P-201ENST00000384396 106 ntBASIC2.12□□□□□ -2.07
KRT40Q6A162 MIR520A-201ENST00000384862 85 ntBASIC2.12□□□□□ -2.07
KRT40Q6A162 HMGN2P38-201ENST00000423806 265 ntBASIC2.12□□□□□ -2.07
KRT40Q6A162 RPS29P11-201ENST00000496507 171 ntBASIC2.12□□□□□ -2.07
KRT40Q6A162 RNU5E-3P-201ENST00000515913 68 ntBASIC2.12□□□□□ -2.07
KRT40Q6A162 MIR4303-201ENST00000581299 66 ntBASIC2.12□□□□□ -2.07
KRT40Q6A162 AC134878.1-201ENST00000619901 243 ntBASIC2.12□□□□□ -2.07
KRT40Q6A162 AC027279.3-201ENST00000625055 122 ntBASIC2.12□□□□□ -2.07
KRT40Q6A162 RNY1P10-201ENST00000363268 113 ntBASIC2.11□□□□□ -2.07
KRT40Q6A162 SNORD58C-201ENST00000365223 64 ntBASIC2.11□□□□□ -2.07
KRT40Q6A162 SNORD18B-201ENST00000365659 72 ntBASIC2.11□□□□□ -2.07
KRT40Q6A162 RNU4-52P-201ENST00000384209 138 ntBASIC2.11□□□□□ -2.07
KRT40Q6A162 AL034345.1-201ENST00000407768 123 ntBASIC2.11□□□□□ -2.07
KRT40Q6A162 MTATP6P29-201ENST00000415057 132 ntBASIC2.11□□□□□ -2.07
KRT40Q6A162 HMGN2P32-201ENST00000444648 269 ntBASIC2.11□□□□□ -2.07
KRT40Q6A162 RN7SKP179-201ENST00000516126 217 ntBASIC2.11□□□□□ -2.07
KRT40Q6A162 AC021506.2-201ENST00000612354 169 ntBASIC2.11□□□□□ -2.07
KRT40Q6A162 AC015726.2-201ENST00000620112 122 ntBASIC2.11□□□□□ -2.07
KRT40Q6A162 ICE2P2-201ENST00000483823 2787 ntBASIC2.1□□□□□ -2.07
KRT40Q6A162 Y_RNA.81-201ENST00000362997 102 ntBASIC2.1□□□□□ -2.07
KRT40Q6A162 Y_RNA.410-201ENST00000383992 113 ntBASIC2.1□□□□□ -2.07
KRT40Q6A162 RNU6-429P-201ENST00000384582 108 ntBASIC2.1□□□□□ -2.07
KRT40Q6A162 MIR9-3-201ENST00000385084 90 ntBASIC2.1□□□□□ -2.07
KRT40Q6A162 MIRLET7F2-201ENST00000385277 83 ntBASIC2.1□□□□□ -2.07
KRT40Q6A162 AL627390.1-201ENST00000396055 340 ntBASIC2.1□□□□□ -2.07
KRT40Q6A162 RNU2-40P-201ENST00000410833 196 ntBASIC2.1□□□□□ -2.07
KRT40Q6A162 HMGN2P19-201ENST00000425149 265 ntBASIC2.1□□□□□ -2.07
KRT40Q6A162 RN7SL274P-201ENST00000492268 272 ntBASIC2.1□□□□□ -2.07
KRT40Q6A162 SNORA25.15-201ENST00000516487 89 ntBASIC2.1□□□□□ -2.07
KRT40Q6A162 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.1□□□□□ -2.07
KRT40Q6A162 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.1□□□□□ -2.07
KRT40Q6A162 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.1□□□□□ -2.07
KRT40Q6A162 RNU6-833P-201ENST00000363486 107 ntBASIC2.09□□□□□ -2.07
KRT40Q6A162 Y_RNA.224-201ENST00000364308 111 ntBASIC2.09□□□□□ -2.07
KRT40Q6A162 Y_RNA.440-201ENST00000384120 114 ntBASIC2.09□□□□□ -2.07
KRT40Q6A162 MIR17-201ENST00000385012 84 ntBASIC2.09□□□□□ -2.07
KRT40Q6A162 AL356379.1-201ENST00000414105 126 ntBASIC2.09□□□□□ -2.07
KRT40Q6A162 MIR4419B-201ENST00000577260 68 ntBASIC2.09□□□□□ -2.07
KRT40Q6A162 MIR4448-201ENST00000584360 86 ntBASIC2.09□□□□□ -2.07
KRT40Q6A162 BX248123.2-201ENST00000606318 124 ntBASIC2.09□□□□□ -2.07
KRT40Q6A162 RNU6-647P-201ENST00000364243 107 ntBASIC2.08□□□□□ -2.08
KRT40Q6A162 RNU6-1189P-201ENST00000383958 107 ntBASIC2.08□□□□□ -2.08
KRT40Q6A162 AC093850.1-201ENST00000454121 251 ntBASIC2.08□□□□□ -2.08
KRT40Q6A162 SNORD33.1-201ENST00000516213 88 ntBASIC2.08□□□□□ -2.08
KRT40Q6A162 SNORA31.17-201ENST00000516953 127 ntBASIC2.08□□□□□ -2.08
KRT40Q6A162 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRT40Q6A162 WWP1P1-201ENST00000466609 2769 ntBASIC2.07□□□□□ -2.08
KRT40Q6A162 RNU6-834P-201ENST00000362367 110 ntBASIC2.07□□□□□ -2.08
KRT40Q6A162 SNORA16B-201ENST00000364674 135 ntBASIC2.07□□□□□ -2.08
KRT40Q6A162 RNU6-1325P-201ENST00000364905 105 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 256 ms