Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 RNU6-647P-201ENST00000364243 107 ntBASIC2.28□□□□□ -2.04
ZNF394Q53GI3 RNU1-133P-201ENST00000364867 167 ntBASIC2.28□□□□□ -2.04
ZNF394Q53GI3 RNU6-1081P-201ENST00000384537 107 ntBASIC2.28□□□□□ -2.04
ZNF394Q53GI3 SNORA64-201ENST00000384674 134 ntBASIC2.28□□□□□ -2.04
ZNF394Q53GI3 RN7SKP223-201ENST00000410582 62 ntBASIC2.28□□□□□ -2.04
ZNF394Q53GI3 snoU13.9-201ENST00000458927 103 ntBASIC2.28□□□□□ -2.04
ZNF394Q53GI3 AC104435.1-201ENST00000483483 166 ntBASIC2.28□□□□□ -2.04
ZNF394Q53GI3 RNU6-479P-201ENST00000516348 105 ntBASIC2.28□□□□□ -2.04
ZNF394Q53GI3 MIR3945-201ENST00000581853 98 ntBASIC2.28□□□□□ -2.04
ZNF394Q53GI3 AC104984.5-201ENST00000586878 94 ntBASIC2.28□□□□□ -2.04
ZNF394Q53GI3 AL513534.2-201ENST00000603836 250 ntBASIC2.28□□□□□ -2.04
ZNF394Q53GI3 AL022345.2-201ENST00000606307 135 ntBASIC2.28□□□□□ -2.04
ZNF394Q53GI3 AC106754.2-201ENST00000623006 233 ntBASIC2.28□□□□□ -2.04
ZNF394Q53GI3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
ZNF394Q53GI3 RNU2-40P-201ENST00000410833 196 ntBASIC2.27□□□□□ -2.05
ZNF394Q53GI3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ZNF394Q53GI3 RNU6-998P-201ENST00000515894 101 ntBASIC2.27□□□□□ -2.05
ZNF394Q53GI3 RN7SKP179-201ENST00000516126 217 ntBASIC2.27□□□□□ -2.05
ZNF394Q53GI3 MIR1273D-201ENST00000577266 86 ntBASIC2.27□□□□□ -2.05
ZNF394Q53GI3 WWP1P1-201ENST00000466609 2769 ntBASIC2.26□□□□□ -2.05
ZNF394Q53GI3 Y_RNA.280-201ENST00000364765 112 ntBASIC2.26□□□□□ -2.05
ZNF394Q53GI3 RNA5SP37-201ENST00000365420 130 ntBASIC2.26□□□□□ -2.05
ZNF394Q53GI3 RNU6-22P-201ENST00000384355 107 ntBASIC2.26□□□□□ -2.05
ZNF394Q53GI3 Y_RNA.537-201ENST00000384626 109 ntBASIC2.26□□□□□ -2.05
ZNF394Q53GI3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.26□□□□□ -2.05
ZNF394Q53GI3 MIR548I2-201ENST00000408348 149 ntBASIC2.26□□□□□ -2.05
ZNF394Q53GI3 AL035398.1-201ENST00000430869 322 ntBASIC2.26□□□□□ -2.05
ZNF394Q53GI3 RNU2-13P-201ENST00000515909 113 ntBASIC2.26□□□□□ -2.05
ZNF394Q53GI3 RNU7-53P-201ENST00000516705 60 ntBASIC2.26□□□□□ -2.05
ZNF394Q53GI3 AL357312.1-201ENST00000603879 298 ntBASIC2.26□□□□□ -2.05
ZNF394Q53GI3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.26□□□□□ -2.05
ZNF394Q53GI3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.25□□□□□ -2.05
ZNF394Q53GI3 U8.2-201ENST00000363156 134 ntBASIC2.25□□□□□ -2.05
ZNF394Q53GI3 RNU6-309P-201ENST00000364573 106 ntBASIC2.25□□□□□ -2.05
ZNF394Q53GI3 SNORD116-14-201ENST00000383894 92 ntBASIC2.25□□□□□ -2.05
ZNF394Q53GI3 SNORD116-17-201ENST00000383929 92 ntBASIC2.25□□□□□ -2.05
ZNF394Q53GI3 SNORA24-201ENST00000384096 131 ntBASIC2.25□□□□□ -2.05
ZNF394Q53GI3 SNORA70B-201ENST00000384210 135 ntBASIC2.25□□□□□ -2.05
ZNF394Q53GI3 SNORD116-15-201ENST00000384445 92 ntBASIC2.25□□□□□ -2.05
ZNF394Q53GI3 SNORD116-19-201ENST00000384729 92 ntBASIC2.25□□□□□ -2.05
ZNF394Q53GI3 HMGN2P19-201ENST00000425149 265 ntBASIC2.25□□□□□ -2.05
ZNF394Q53GI3 AL158147.1-201ENST00000443970 75 ntBASIC2.25□□□□□ -2.05
ZNF394Q53GI3 HMGN2P23-201ENST00000456759 269 ntBASIC2.25□□□□□ -2.05
ZNF394Q53GI3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
ZNF394Q53GI3 Y_RNA.71-201ENST00000362892 104 ntBASIC2.24□□□□□ -2.05
ZNF394Q53GI3 Y_RNA.114-201ENST00000363265 113 ntBASIC2.24□□□□□ -2.05
ZNF394Q53GI3 SNORA48.3-201ENST00000391081 134 ntBASIC2.24□□□□□ -2.05
ZNF394Q53GI3 RPS29P29-201ENST00000456396 171 ntBASIC2.24□□□□□ -2.05
ZNF394Q53GI3 UBL5P3-201ENST00000475112 231 ntBASIC2.24□□□□□ -2.05
ZNF394Q53GI3 MIR548AR-201ENST00000582191 57 ntBASIC2.24□□□□□ -2.05
ZNF394Q53GI3 MIR5002-201ENST00000584713 97 ntBASIC2.24□□□□□ -2.05
ZNF394Q53GI3 AC091932.4-201ENST00000623386 200 ntBASIC2.24□□□□□ -2.05
ZNF394Q53GI3 MIR302B-201ENST00000362188 73 ntBASIC2.23□□□□□ -2.05
ZNF394Q53GI3 Y_RNA.127-201ENST00000363386 109 ntBASIC2.23□□□□□ -2.05
ZNF394Q53GI3 Y_RNA.651-201ENST00000459380 103 ntBASIC2.23□□□□□ -2.05
ZNF394Q53GI3 RPL23AP42-201ENST00000471152 471 ntBASIC2.23□□□□□ -2.05
ZNF394Q53GI3 RNU6-250P-201ENST00000516958 103 ntBASIC2.23□□□□□ -2.05
ZNF394Q53GI3 MIR548AI-201ENST00000579940 88 ntBASIC2.23□□□□□ -2.05
ZNF394Q53GI3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.23□□□□□ -2.05
ZNF394Q53GI3 AP000553.5-201ENST00000641933 54 ntBASIC2.23□□□□□ -2.05
ZNF394Q53GI3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.22□□□□□ -2.05
ZNF394Q53GI3 Y_RNA.218-201ENST00000364218 104 ntBASIC2.22□□□□□ -2.05
ZNF394Q53GI3 RNY1P6-201ENST00000384193 109 ntBASIC2.22□□□□□ -2.05
ZNF394Q53GI3 MIR676-201ENST00000390702 67 ntBASIC2.22□□□□□ -2.05
ZNF394Q53GI3 RNU2-51P-201ENST00000410708 197 ntBASIC2.22□□□□□ -2.05
ZNF394Q53GI3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.22□□□□□ -2.05
ZNF394Q53GI3 RNU6-313P-201ENST00000516317 112 ntBASIC2.22□□□□□ -2.05
ZNF394Q53GI3 MIR4764-201ENST00000580680 88 ntBASIC2.22□□□□□ -2.05
ZNF394Q53GI3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.22□□□□□ -2.05
ZNF394Q53GI3 Y_RNA.783-201ENST00000613546 102 ntBASIC2.22□□□□□ -2.05
ZNF394Q53GI3 MIR6715A-201ENST00000615929 79 ntBASIC2.22□□□□□ -2.05
ZNF394Q53GI3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
ZNF394Q53GI3 MIR302D-201ENST00000362275 68 ntBASIC2.21□□□□□ -2.06
ZNF394Q53GI3 MIR520C-201ENST00000385005 87 ntBASIC2.21□□□□□ -2.06
ZNF394Q53GI3 RNU6-1168P-201ENST00000390831 104 ntBASIC2.21□□□□□ -2.06
ZNF394Q53GI3 RNU5E-3P-201ENST00000515913 68 ntBASIC2.21□□□□□ -2.06
ZNF394Q53GI3 MIR3124-201ENST00000582636 67 ntBASIC2.21□□□□□ -2.06
ZNF394Q53GI3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.21□□□□□ -2.06
ZNF394Q53GI3 uc_338.20-201ENST00000621563 178 ntBASIC2.21□□□□□ -2.06
ZNF394Q53GI3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
ZNF394Q53GI3 SNORD28B-201ENST00000390993 75 ntBASIC2.2□□□□□ -2.06
ZNF394Q53GI3 MIR1261-201ENST00000408659 82 ntBASIC2.2□□□□□ -2.06
ZNF394Q53GI3 RNA5SP261-201ENST00000410536 106 ntBASIC2.2□□□□□ -2.06
ZNF394Q53GI3 HSPE1P24-201ENST00000450782 238 ntBASIC2.2□□□□□ -2.06
ZNF394Q53GI3 RNU7-73P-201ENST00000458743 63 ntBASIC2.2□□□□□ -2.06
ZNF394Q53GI3 RNU7-67P-201ENST00000459003 62 ntBASIC2.2□□□□□ -2.06
ZNF394Q53GI3 AC008834.1-201ENST00000511612 175 ntBASIC2.2□□□□□ -2.06
ZNF394Q53GI3 MIR4648-201ENST00000580107 72 ntBASIC2.2□□□□□ -2.06
ZNF394Q53GI3 MIR4791-201ENST00000607666 84 ntBASIC2.2□□□□□ -2.06
ZNF394Q53GI3 GHRLOS.1-201ENST00000610995 70 ntBASIC2.2□□□□□ -2.06
ZNF394Q53GI3 AC243994.1-201ENST00000618627 109 ntBASIC2.2□□□□□ -2.06
ZNF394Q53GI3 MIR8063-201ENST00000621930 81 ntBASIC2.2□□□□□ -2.06
ZNF394Q53GI3 AL596211.1-201ENST00000569873 2277 ntBASIC2.19□□□□□ -2.06
ZNF394Q53GI3 RNA5SP160-201ENST00000364866 120 ntBASIC2.19□□□□□ -2.06
ZNF394Q53GI3 SNORA51.10-201ENST00000384418 136 ntBASIC2.19□□□□□ -2.06
ZNF394Q53GI3 Y_RNA.494-201ENST00000384432 111 ntBASIC2.19□□□□□ -2.06
ZNF394Q53GI3 RNU6-1065P-201ENST00000384513 106 ntBASIC2.19□□□□□ -2.06
ZNF394Q53GI3 SNX2P2-201ENST00000424553 323 ntBASIC2.19□□□□□ -2.06
ZNF394Q53GI3 AC079140.2-201ENST00000506193 142 ntBASIC2.19□□□□□ -2.06
ZNF394Q53GI3 RNU1-41P-201ENST00000516161 162 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 317.5 ms